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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1744872..1749519+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00563.1 ID=Blg00563.1|Name=Blg00563.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4648bp|location=Sequence derived from alignment at Sc0000042:1744872..1749519+ (Branchiostoma lanceolatum)
GTAAAATTCAAGGGCAACTACCGATCCCCCCATTGTTATTGGTCCCGTTG
CTATGGTTACCCGGGACTCGAGCCAGCGACCTTGAGTTCCAGATAGAAAG
TTATTCTCCAAGCAGATGTTGGAAGGGGAGATCATAACGGTCTCTAAAGT
CGCCCCGCTTTCCTGGCTTGAACCTAAACGGGACAGGTGGGATAACGTGG
CGATCTTCCCTCCCACCATTGCTCGGAAGTTGTCACAAAAGGTCTTAACG
CTAGACGTCTGCATGCTTGTAAAGCTGACTCGAAGCATGATCATTTGTGA
TTGTGCTGTGTTGCAAACCTTAGCAAAGAGATAATTAATTGCTTGCAGAA
GCCCAATTTATAAGTTTTGTAAACTTACAAAACTTACTGAGTAGCTTGAG
TAACTTTGGTATTGTGTATGTACAAGTTCATCATATCATTTCCATCAAAA
CATCTGCTTGGAGACCACACATTAAAACCTTTTTATTGGTACCACACATA
GAAAATGGCTTGGTCCAACCCCCGTATGCAGTACTCTTGTGTGAGGAGGT
ACCGTGGTCCTGTGAAGCTGGTGGTACTGGACTGGGCAGGGACCGTCATC
GACTACGGGGTGTGCGCGCCGGCACTGACCTTCTCTCAGATCTTCAAGAA
TGAAGGAGTCCCCATCTCCAACGAGGAGGCAAGGGGGCCCATGGGAGCAC
ACAAGAGGGTGAGATTAGACAAACAACAAGCCTGTCTTGGCTGTCCAGCA
AATAAGATTACTTACATCAAGGAGGGCCTGCATGCCCCTTTTACGTAGAG
TGTAATTGGCCCTTTAAATTTTACGTAGAGCGTTGCCGACCACTCCATAA
TTTAGCGTAGATCGTGGGGGGCTTTCTGAATTTAGTGTAGATCGTAGGGG
CTTTCTGAATTTAGCGTACTACGTAGCCGGCCCTCCCTATTTAGCGTAGA
GCGTTGTCGGGACCCCCCCATGCAGGCCCTCATCAAGGAGGTTAACCTTT
TGGACCCCAGATTGTTCAACATCAAGCAAATCATTCCTTCTTGATAAGGT
GGGAGGAGCCTGGTATCTAAACATATTATAGCTGCTGAGACTGTTTCGCC
TTCTGCTCAAATAGGACAGGACGAAAGAGCCTTGGCAGCTGTAATATCTA
CATCTACCTTTTGATACCCCCATATAGCCCCATCAGGGGCAAAGTAGGTG
GGAGTTGAGGTCCCGGGCTAAGGCAGGCAGGCCTCGGGCCTGGCACATAA
CGACTCAACGGTGGGAGCCGTCACAACCGTGCCAGGCAGGGTATTCACTG
AGGAAGTATGAGTGTTTGTATGAATCAGTTCTTGCGTAGATAGTCTGAAA
CTTGAGGTGGAGGCTCCCCCGCCATTCAGGAGAATAATAGGTTCAGATCG
ATGAGGCTAAGTCTGGGGCAGACTGATGATGCCTGTTTCCCCCTCCGTTA
TCTATCAGGTTCACATCCAGCGCGTTCTAGAGAACGAGAGCGTGAGGGGG
CGGTGGATCCAGAAGCACGGTGGACCCCCCACGGAGGAGGATGTGGATCG
CATGTACGCCAACTTCGTCCCCATGCAGCTGTCCATCATGAAGAACTACT
CCACCATGATACCAGGTCAGTTATTTGATTCAGGAACAAAGTTACTTTGT
TCCTGAATCAAATAACTGACCTGGTATCATTTTAAGTTTGATGACAACTT
TAATTTGTATTTACAGTTAAGATTTCAAACATGCTGACTTATTTTAGTTT
ACAATCCAAGTGGAGGTTAAACATGTTAAAGGAATGCATATGCAGATATG
TTACTACTGATCAAAGTTCAGCATAAGCACAATGTGTTATTTGCTTTAGG
AACAAAGTTCGATGACAATTTTATGTTTATAGTTATGATTTCAAGCATGT
TGATTTGCTTTGGTTACAAGCCTAGGGTTGGAGGTCAGAGTGATGCATAC
AGGTGATGACTCAAGTGAAAAGGAGCACCTAGCTTTGGTTAAGGATGTTC
TCCCAGATTGGACATAAAGCTTGAAGTCCCGTGTTTGATGAGAGAGCCAC
AACTCGAGCAAGTTTAAGATCCCACCACACTTATCGCTAAGAGTAGGAGT
TCATCCCGGTGAGTAGATCAAACCTTACAGTCTGGTATTACACAGCTTGT
ACTTACTGTACAAAAACTGGTGTGGTATGCCTAAAGGTGACAAACAAACA
AACAAACAAAACGTAAAGGATCTAAACCCTTGTCCCATCCCAGGTGCTGT
GGAGACAGTGAACCATCTCAGAGAGAAGGGGATGAAGATCGGCTCCACGA
CCGGCTACACCACCCCCATCCTGGACGACCTCAAGCCGGTCGCCGCAAAG
CAAGGCTATGAGCCGGACTTCTACGCCGCGGCTGACATGGTCCCGCAGGC
ACGCCCTTGCCCGTATATGGTGTGGCTGAACGCCATCAAACTTGACGTGC
ATCCCATTGAGGCTGTTGTGAAGGTATGCAAGTTCTCTATTTCATTGATA
GCCAGGGCTGTCTCCAGCTTTACATTTTTTCGTCCCACTCGTTGTTTGGG
AGCCAATGAAGTTGATTTTCGTTACCAAATCTATTATTTTAAGCTACTCG
TAATACAAAAATACATTTTCATCAACTACACGTGATGGAGTTCTGATTTT
GGGGATGAACTGAGTGAAATTTTTGTTCATCTCAACAAGCAAATTTCCAT
CCTGGGACAGAGGGCTACTGGTCCTGGAGACAGCCTTGTTGATCACTTTA
CACCCTTTACATAGGTTAGTAGAAGCACACAAAAACACACATACGCACAC
AAGACAAGACAAAAACAATACTCCACTCCCTTGGTGTAAAGTTAAAAGTC
TGATTACATTGGTATGTTCTGATATCATTACACAATGTGTCTCCCACAGG
TAGATGACACAGTGGACGGAGTAAAGGAGGGAACGTCAGCAGGATGCTGG
GCCGTGGGCGTGGCAAAAACGGTAGGTTTCCTACGAGTTCTGCAAATATG
TATCTGAGCTAACCTTGAGTGCCATGCATATTCATCATTACCATATTTCT
TTGTCAAAGAAGATGATAATTCTTTGAACTGTATCTACAGTTAAACTGAT
CTGGGATTTAGAGGTTCAAAAACTAGATTGATTTCTTTGATCTGCACTGT
TCTGGGTATACAGTATATCCCAGCTAACTATGACCATATGTGGTATATTT
ACCATAATTGATATTTATCCCAACCATCATAGAAGACAAAGTTACACATT
TATCCACATCGAAACATATTTCGGATTTCTTTTTCTAAATGCCCAAAAAC
TGAATTTATAAATCCATCATCATTCATGAACATGACTTTTGACCCTTGAC
CCTGGTTGCTAGGGTAACTACGTGGGAGCGACGGAGGAGGAGGTGGCGGC
CATGAGCCAGGGCGAGCTGGACAGGAAGCTGCAGCGCGCCTACGACACGC
TGATCGACTCCGGCGCTCACTACGTCATCGACAGCATCGTCGACCTGCCT
GGTGTCATAGCAGACATCAACCGCCGGTTAGCAGCAGGGGAGAGGCCTTG
ACTTTTTACAAACTATAGTGTGCAGCCAGCTTTTCAGTCGTTGGGACTGA
ATAGTCTTGATTTTGCACAGTATGTTTTAAAAACATTGTGATTAGAATAT
CCTCAGTGTTAAAACAACACTGTTAAAATGATGTAGCATCATGCTAGACG
AAAATATGACAACAGCAACAATAACTACTGTACGTAAAGATAGAGTTTTG
AGGGCATCACATGGATGATAGTGTTCTTGTGATAAAGAAGTTTGTGTTTG
TGTTTGATTTGCTAGTTGGTGGTTTAAATGATCATGGACTTGCCAGATGT
CATAGCAGACATCAACCGACGGTTAGCAGCAGGGGAGAGGCCTTGATTTC
CCCATGACAAAACAACAGCTACCCTTTGCCCTAAGTCTTGATATTTGTTG
ATATTAGGTATTCTCCAAGCAGAGGCTTCGATCGAGAGGGATAGTTTTGA
CCGGGATTTTTAACGTTCCTCTCATGAGAGGAGAGGAACGTTAAAAATCC
CGGCCAAAACTACCCCTCTCGATCGAAGCCTCTGCTTGGAGAATAGATAT
TAGGTAGCAGGGCATACACTAAGAATAGAAATCAGGTGCCCTTCCTTTTG
CAGGGAACACCCAGTCTCCCTGATCACACTGCGACTTTCGTTTTTTCCCT
ATACCAGACACTGGGACAGCATGAAAATTGATTGATGTGTAAAGCTACCA
GATAATTGTGAATCCATAGAGCCCATTGGAAAAGTCTGGTCACCCCCACC
CCCCAAATTTGTGGATGCCCTGTCTATAAATCCTAGCTAAAAGCCTGCAC
TCAGTAAATGTAGTGTCAACATATAGGTTTCTCAAGGAAAAATCTTAATG
CTCAAACTAACTTGACTTTCTTCTTTGTTTTTCTGATAGCGTGATTGTTG
TCTTAGCAGAATACAACTTGAGTTGATAATGATCAATGATAATGATCTGT
GGTCTTCCTGAACACCTACATTTTATCTATAATGCCTTCTTGTTTTCTTT
TGATTTGAAATTCTCTTCAGCTTCTCTGAGTGCTATAGCCTAGTATGATC
ACGGCAGAATGACAGCGCTTGTACAAAATTAATAAACATAATTGCTGC Coding sequence (CDS) from alignment at Sc0000042:1744872..1749519+ >Blg00563.1 ID=Blg00563.1|Name=Blg00563.1|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000042:1744872..1749519+ (Branchiostoma lanceolatum)
ATGGCTTGGTCCAACCCCCGTATGCAGTACTCTTGTGTGAGGAGGTACCG
TGGTCCTGTGAAGCTGGTGGTACTGGACTGGGCAGGGACCGTCATCGACT
ACGGGGTGTGCGCGCCGGCACTGACCTTCTCTCAGATCTTCAAGAATGAA
GGAGTCCCCATCTCCAACGAGGAGGCAAGGGGGCCCATGGGAGCACACAA
GAGGGTTCACATCCAGCGCGTTCTAGAGAACGAGAGCGTGAGGGGGCGGT
GGATCCAGAAGCACGGTGGACCCCCCACGGAGGAGGATGTGGATCGCATG
TACGCCAACTTCGTCCCCATGCAGCTGTCCATCATGAAGAACTACTCCAC
CATGATACCAGGTGCTGTGGAGACAGTGAACCATCTCAGAGAGAAGGGGA
TGAAGATCGGCTCCACGACCGGCTACACCACCCCCATCCTGGACGACCTC
AAGCCGGTCGCCGCAAAGCAAGGCTATGAGCCGGACTTCTACGCCGCGGC
TGACATGGTCCCGCAGGCACGCCCTTGCCCGTATATGGTGTGGCTGAACG
CCATCAAACTTGACGTGCATCCCATTGAGGCTGTTGTGAAGGTAGATGAC
ACAGTGGACGGAGTAAAGGAGGGAACGTCAGCAGGATGCTGGGCCGTGGG
CGTGGCAAAAACGGGTAACTACGTGGGAGCGACGGAGGAGGAGGTGGCGG
CCATGAGCCAGGGCGAGCTGGACAGGAAGCTGCAGCGCGCCTACGACACG
CTGATCGACTCCGGCGCTCACTACGTCATCGACAGCATCGTCGACCTGCC
TGGTGTCATAGCAGACATCAACCGCCGGTTAGCAGCAGGGGAGAGGCCTT
GA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00563.1-exon-Sc0000042-1570713199:1744872..1745057 | Blg00563.1-exon-Sc0000042-1570713199:1744872..1745057 | Branchiostoma lanceolatum | exon |
| Blg00563.1-exon-Sc0000042-1570713199:1745373..1745579 | Blg00563.1-exon-Sc0000042-1570713199:1745373..1745579 | Branchiostoma lanceolatum | exon |
| Blg00563.1-exon-Sc0000042-1570713199:1746330..1746486 | Blg00563.1-exon-Sc0000042-1570713199:1746330..1746486 | Branchiostoma lanceolatum | exon |
| Blg00563.1-exon-Sc0000042-1570713199:1747115..1747344 | Blg00563.1-exon-Sc0000042-1570713199:1747115..1747344 | Branchiostoma lanceolatum | exon |
| Blg00563.1-exon-Sc0000042-1570713199:1747771..1747842 | Blg00563.1-exon-Sc0000042-1570713199:1747771..1747842 | Branchiostoma lanceolatum | exon |
| Blg00563.1-exon-Sc0000042-1570713199:1748234..1748415 | Blg00563.1-exon-Sc0000042-1570713199:1748234..1748415 | Branchiostoma lanceolatum | exon |
| Blg00563.1-exon-Sc0000042-1570713199:1748761..1748828 | Blg00563.1-exon-Sc0000042-1570713199:1748761..1748828 | Branchiostoma lanceolatum | exon |
| Blg00563.1-exon-Sc0000042-1570713199:1748975..1749519 | Blg00563.1-exon-Sc0000042-1570713199:1748975..1749519 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1744872..1749519 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00563 |
|
