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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1728677..1736607+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00560.1 ID=Blg00560.1|Name=Blg00560.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7931bp|location=Sequence derived from alignment at Sc0000042:1728677..1736607+ (Branchiostoma lanceolatum)
GCCATTGCTGTTTTGTGTCTTTGATTTCATCACCAGATGTCTCATGTTCA
AGTTTAGCATTATCACATTGCACAACTGTTCTCCTGCTCCAAAGGAATTA
TGATGTTACGTTTTTACATTTCATTTTCAACATCGGTCTGCCCTTTCCCT
CGTCCCCTTCTATTTGATGATGGTCTACCCAGAGTTGTTCTCGGTGGTAT
TACAGTCGACGAATATTCCCTGTCATGCAGGAGCTGAGTCTCTTCGCTTG
TGTGGTCATAGTGCTGTATACTTCTGTACGGATATTCTTCCGTTGCGTCC
TGCATCACTGCACAATTATGTTTGCTGCAGACCAATGCCTTAGCCAGAAA
AGGAACACTATCTTGGACATAGGTTTGTATAATGCTATATGGTCTGTTGT
AATATGTGCCTCTAGTTATGTATGCAAGATTATATATGCATCAGAAGTGG
TTATGAAACAGTCTTATATAACTGCACTTCTGTCTCAAGGTTTAACGAGG
GTCCAACCAGCCATGGTGATAGGGAGTTTTGTAGCACTGGTGATCTTTCA
CGTCTTCTTCTTGCTGTTTGTAAAGTGTCTTCTGCATTACTGGTCCGTTA
TGTCCATGATGCACACCGCTTACAAGGACAGGGGCAACCCAAGTGATGCT
ACTGCACAGGGAGGTCTGTATAAACAAGGCTCTATGTATACCAAATAGGG
ATGCAGAGAGAGTTAAGTATAGCTTTCAAAGACATTATCTACATGGGGTG
AGGAGCCAGTGAGTAGGCATGCTCCTGGGTTTCATACTGTTCCTGCTGGT
TGTTTACGTTGCGGTGCGGGTGGTACTGGAATGTGTTTTCTACCACTGCT
CCCTGTTCTACGACTTATATAGTCTGTACGGGAGGGACGGCATCCTGGTG
AATGGTTGGTGTCGGTTTTCATTCCATGGCAGCCTCTAGTGTGACTCAGT
AGCAAGAGGTCAGGATACGTTATCTGATATTGTTTCTGGCAACGTTATCA
GCTCCCAACGTCATTATTTGAACATAGACCCTTCTAGACAAAATGGTGGC
AAATGACGCAATCATTATAGCTGGGTATAGCCTTGGTCACTTTGAGATTG
TTTTAAAAGTCATTTTGCAAATTTCAAGGTCACCATGCTGGAAGCTTAAG
GCCACACCAATTTATTTCGTTGGTTCTTGGACATTTTAAGGTGTAAGTAT
GGCGTACATCATAAAAGCAGAGGGCAGAGAGAAAAAAATTGGACGTAACT
GTATTTACGGCGTAAAACTGAGTGGGCCAAAGTATACATCTGGTCCCCAG
GCTTTGTTTTTATTGTGTTTTTCCAGTTTTATAAATCCGATAACTAATAA
ATTGAATTGGTGTGGCTGAACATGTCAATTTTTACTAAAATTAACTTAAT
TTTTACTGAATTTGAAATAATGTATTTATCTGTATACTATGATATTTTTA
CTTTGATTAAGCGGATAGTTTTGCATGATAGAATTCGTATATTGTTACAA
TAGTAGTAATGTGCGATGTTCTGAAATTACTTGTCAAAGTGTCTGTTGAC
GGAAAAATGTAAATCAAGACAAGAAAGACTTTGTATGAATAACAGGAGCG
ACCTCTTAGAATGTTAGGTCATAGCTGTTTATATGGCGAAGTTCAAGGTC
AGTGCCACTTTTAGAAATATGATAGTCGAATATTTTGCAAGAGAAACCCG
AAGGGAAAATTGCATGACTTCGATGGTTCAACTTGTTTGTCAGACTATAA
GCATCTACTTCTTCTTCTTAATCTTAATGCCCGCAGTCAATTTGCTGACT
ATTATGGCATATGATGTTTCGAGAGCGCAGCTGGCTTATGTGACTGGTTG
TGTTTCGATCCCCCTGCTAAACATCCTTATTCGTAACTATCAAGTAACGT
CAACAGTCCATAATCCAAAACTCATAGTCCAGATTTCGTGCCATGGTCAG
TCAACATGGTCAGTCAACATGGTCAGTCTACAAATCTATGTCTAATCAAT
GTCGTATAAAGCCTCTGCATATCTGAAACCTCTGTGACGAATGTGGTCGC
TGTATATCATCTACAATGAATCTACAATGTAGATACGAGGGGAAACCTTC
AATTGGGATTTCTTTATTTGCAATAGGTTCAACCTTGAATGTGCTATTTT
GGTCTTGTAAGGGAGCAAGCTGTTGCTGGTTGACGTTTGGTTTCACTCTA
ACGTTTACGGATTCTATCCACCAAAGTTTCCCATGTTTTCCCCTGAGTTT
GGGATTTGTTCAATGTTCCGGGTGATCTATGGATTCCATGGATGGGGAGA
GGTTACGATAAAAGAGGGTTGGTATAAGTTTTCTCTCTAAGGCATATTTA
TATTTCTACTAGACATTGCAACGACCAAAATCGGATTTGTTTGACCATTG
GTTTTATAATTGAACAATGTAAAAGTATCATTTAAAAGGCAACATAACAC
ACTACTTTAAAAGATTCATTCTTTATCTTTGAAATTCGTTGAACGATGTC
TAACCCTCGTCATATGGGGAACAGACGATAACTGGATAGTGAGTGTGAGG
GGTGTATGTCACTAACATTGCATGATGAAATTGTTCCCTTCTCGGTGTCA
AATGTAAGCGCTAACTTTGAAATTGTTTGAAATAGACTGAATTCTAATGT
CTGCCCAATCCAAATCTATATGGAACATTTTGCCATATGACATGCAATCT
GCAACTAAGACTCTTTAAAGCTCCAGGAAGATTAGCTACTTACAGATAAT
CAAATTAAAAGTCATTTATTATCCTCTTCTTAAAAATATCCAGAATCCAC
AAGTTCATCAAGAATGGTCAAGACAACAAACGAAGTAAAAAGGAATTTTT
GATTTGTTTTAGTGTATGAGCTCAAGATCATAATTCACAAATTATTTACT
TGTTGTTGGCTTAGAAGTAGTCATGTTTTCGTCATGTGGCCTTGTTGTCG
TAATGCCAAAACTGCGAAAATGTCACATCTTCTACCCATGACGTCCCTGC
CAACAGTTACGACGTAGTAGTGCCAGTTGTTTTATCAGTCTTAATTATCA
TAATATTAATAGTAGAATCTGATACAAATTCAAACATGAATATGTTACAT
TTAGGATAGATTTTGTCTGGTTAGATAACCTATTCCTTTATTTTGATCTT
TAGGGGTTCCAACAGATTCGATAACCTCAGGTAATAACTATTAATAAAAG
TTGTCCTTGTCCGAAATCTGGGATAAAAGTGTAATTACGTAAGGCAGTAT
GCCAACTGTGGAAAGTTACATCCGATGATGATCAGATAGAGGAAACCTTG
TGACTTCTGGGTGTTTGTGCATCACCGCTATCCTATTTCTGCCTCGTAAA
CAAGATAATCAGCTGCCAGCATATGAGAGGTAAACATCGCATCATAACTT
CTCTGCTGGTTCTATTCGGCACTGAAGTTTTTCTGTGCACTCTTCCTTAA
GGATACGGTGCTGTACTCTTGTGCGTCTTAAGGTCTTTATTGCCTTTAAC
TCGAGACTCAATTGCAAGAGACAGGGCTGACTGTGTGTTGTGGTAAGACA
TCTAGGAAGCTGTTGTACTTGTCACTGAGACGTTGTTGGAAGTCCATGGC
TGGTGCGGTGTGTGTGATTCATAGGAGCATTTGTCAGACTGGTCAGATCG
GCTTGTGCCTTCGGACAGGGACATGGGCGGACCGGTACCCCCTCCACGAC
GCCGCGTGCTGCGGACAGGTCCTCCTCCTGCAGAAGCTCGTGCAGGAAGG
AGCGAACGTGAACGCTCGCACGCTCAACTCGTTCACCCCGCTTCACGACG
CGTGCCTGGGCGGCCACCCGGGCTGCGTAAAGATTCTGATCGGAGCAGGA
GCACAGGTGGGCAGTTTGTACACGTAGAATGTGTCGGAGTCACAGTCTTA
GCTGATACCAATAACAAGGGCATTCGATACAACACTTTTTCAGGGACACA
TTGATTTTTCTTCATGAAAATTTCAAGGTTTGTGTCGCATTTGAACGTAA
GACTCAAACTCAAATTCTGCTTTTTATTTCAAATTTCCATGTCCACAATC
TAGTTATTTTTCTCAGAAACATGCCTGCATACAACAACAGTTTTTCTGTT
CTATACAGTTTTGTTGTTGTTTCTATAACCAAAACAGAAATGCATGGCGA
CTGTAGACATCTCTCTCCCGAGGATGTTCTGTTTCGGCACAGGACCTCCG
CTGAAGTACTCATCCTTCAGTTAAGGCTGTGACGAGATGGCTGCCATGCC
GTATATATAGTTTGTAGTGTTTGTAACACTTTCTTTACAGGTTCGTACGA
GGAGTCGTACCTCTTACACGACGCAGCAGCCAACGGCCAGGCTCATGTCT
TAAGAACGTTAATCGAGCAGGGGGCGAACGTAAACTTCCGCACCCCGGAC
TGGTGCATGCCCCTTCATGAGGCCTGTCTGGGGGGACATTTCCACTGCGC
ACAGGCACTCATCAAGGGTGGGGCAAAGGTAAGATCAGGAGGACGCAATG
TTTTGCTAAAGGCAGAGGCTATTGACAGGATTGGCGGGATTTTTTTTACT
ACTCACTGGATGTTCCTTCCAATAGCCATGGCTTTTATTAATCATTCCTC
AATATATCTATGTATTTTTCTACAAACGAAGTGACAGTACAACACTGACG
GTGAGGAAAAGGAACGAAAGGACATATAGTATGGAAGAAGGAAATTAATG
ATTTACATTTAGAAATATAAGACATTTGTGACTTATCTGATCATAAATGA
ATTGTTAACAGTTAGTCTAGAATAGATAAAATCAGCTTAATTTGCTACAA
GAAGAGACGTGTCAATGACAGGCAAAACACCAAATTTCTGCAACAGCTAT
GGTGCGGATAGAGTTTTTTTTAGAGATCTTAATCATTAAAGCTGTTGTAC
ATGTGTCAATGTTGAAGTTGAACCCACGGACCATAGACGGGGACACGCCC
TTGACCTTTGCCTGCTCCAGAGGAAGTGTTTCCTGCGTCAAACTGCTGTT
GAACCATGGGATATCCCCGGACCCAGGGCTCTTCACCAAGTCACCTCTAC
ACGAAGCCTGCTTTAATGGTAAGCTGTTTCTTTCACTGACTCCGTGTAGG
GAGTTTATGTTTTTGATGTGTCTGTGTTTGTCATTTGAATACACCATCAG
TATATTGCCATGAAGTGAGTGGGAAGATGACCGAAAAGGTTAGACTTGTC
GGAGCGGTAGGAAGTATAAGAAGTACAGATCAGAGTTGGTAGAAATAGTC
ATTAATACGACATGAAATACAGTCCATAGAAAAGGGTACAAATGTACTAA
TTTACTAATTGTCTTTGCAGACTCGCAGTAACTGTTATATATCTTTATAT
TTCTGTACTTGAGTAATATTGAAGAGTTCTCCAGTGCTACATTGAACCTT
TCTGCCAGTCCTTTTTTTCATGATCAGTGTAGAAGGTTCCAGTTATATCT
GGATCAAGAGACTTACCGGTAGTTTTTCCTGCTTTGCATCCAGGTCGGCA
CGAGGTTGTGGAGGTGCTCATCGATGCAGGAGCAGACGTGGCGACAGTCG
AGTCCCAGTACGGCGGCCCTCTGCATGTCGTTTGCAGTAGGAACTACCCG
GAGTGCGCCGAGCTGCTGCTCAGGGCTGGTAGGTCAAGGTTATGATATCT
ATCAGATATCTGTGGTCTGGGCGTACAAAAAAATGTAGTGGTCCTGCTTC
TGGGCTGGAAAATGACTCCAAGCAGCCTGTTGCATGTGGTCTGCAGTAGG
GGTTACTAACCAGAGTACGAAGAGCTGCTCATGAAGGCTGGTAAGTAATG
TATTTGGACAGTTTGCACTCACAGAGAATATGTTCCATAGCTTGGATAGG
ATGATCACATTGACACTGTGCTGAGTCCACCCGTCCCCGTTTCAGGAGGT
TTGCTCTAGTTATTTTGATCTACTCCGCTCCGCTCCTGCTCTAATGAGGG
CTTGCACGTAACAGACATAATATACTCAGGACTTCTTTAGCACTTTTGGT
CCAACTTTTCAGTATATTTAATTGTATCCTCTGTAAAAGTCGACTTGATA
TGACTGGATGATGATCACCTTTTCTTTGAAAAAAAAAAGAAAAGACAACA
ACAATTCATCTTTTGTGTCCAGGTGCTGACGTTGATGCAACCAAAAACTA
CGAGACTGCGCTGCACGTGGCGGCCAAGGTGGGGAGCCCGGAGGTGGTGC
AGGTCCTGCTGGAGTACGGAGCAAACATCAACGCCAAGGACATCAGCAAA
CAGAGGCCCCTTGACCTGACTGACCCCGGGTCGGAGGTCAGGAAAATCCT
CACATATAGAGATGGTGAGTTTATGAATCTAGATTGGAACTTGTCAGCTG
CTAATTGTGTATGTAACTGTCTTTTAGTGCAACATTCCAGATTGAATATT
ATTGTCATGATAGTTTTCTCTTTTCCACATTGAATTTCGCTTTAAGAGAC
ATTAAAAATGCCTCATTTGTGTAACCATGCATTTTTTATGTAGTGCACAC
GTCACCCTGTCAATAGTGCCTTATATACAGTATAATGTATCACTGGTCTA
AATGAGTCATTGTTGTGTCATCTCTTCATTTTCAATATTAGACATCTTGT
AGTTTTTCTTCAATAACTGTTTCCTTTTTGAATAGTTGAATCAGCTTTGA
TACATCTCCAGACAAGGCTTTGATAACTTTAAGTTAGTACTATGGGTTTC
AAATTTTTCACACTTTCTGACCATTTTCGTCAGCTCACCCCAGCCACCTG
ATGCAGCTGTGCCGACTGAGGATTCGCCACCTGCTGGGCAGGGAGAGAGT
CAAATTTGTGCAGCTGCTGAGACTGCCTCCCCTCCTGCAGGACTACGTAC
TCTACAAGTTCTTCAAATGATCTGCAGAATTATCTTCTTTTGTGTACAAG
ACAAATCTTGAAATAACCTCCTAAGGCCGTTGTCACACTGTACAAATGTA
GTTGACGAACTTTGGCCACATTTGCTGATCACCTGGCCAGAAGGTCATTG
AATTAATAGATCACCAGAGACTTCAGCATATTTTCTCCTGAAAATCCACA
TACTCTACAAGTTCTTCAAATGATCTGCAGAATTATATTAAATTTTCTAA
TTACCTGCTAATGCCCCTGTCACACAGCCGATGAGCTTTGATTGTTTTTG
TTGCTTTCCAGAAGTGTATTATTGTCTAGATATAGCCAACAGTCGTATTT
AGTAGTCTATTGTTACAGCAAAGTCAGTCACAGTTCAATGTCACATGTAT
GTTTTCCCCTACATTTCCACAATGTATTTGCAATTAGCCCATGGGCATGA
ACTTGCAATAAAACTTTCAGTAGTCATCTGAAAATCTACTATTTTTTGCA
CCTTATCACATTGCTTGGAGACCTGTGAACATCGGCTGATCGCTAAAATC
GTGCAATGATCGAAAGAACACTGGGCGTCTTAAAGCTTTCTACCGAAAAT
GTCATTTAGAGATTTTTCTGATGTGACAGGGTCATAAAAGACATGGTCGT
GTTCAAGTTCTTAAAATGATATCTTACAGAACAGTCTTCGAAAAGGTCTT
GAAATGACCTCCTGCAAGACATAGGAAATAATCTTTTAATCTATTTTAAA
ATGTTGTACTGTGATGATCATTGACCTGATTAATGTAGAAAGTAGCTGTA
TGAGATTGACATAAAGACCGTACCTGTGTTTGTATGTAAATGATATGTTA
AGATGGAAAACGGGTAATGGAGGAATACAGCAAATGCAGAGACTGAAAAA
CAGTTTGTATAGATGTTCGTATAATGTATTCTGTTTGTAAGATGTTACTT
AGATTGCAATGATTTGACGAAATTGCAAGGTGAGGTAAAATATATATCAA
TTGACAATATGTTGCAACCAACTGAATGGTTTATATTGTAAATACAGTTA
CCTTAAAGGTATAGGAGTGTGGTGCATGTGT Coding sequence (CDS) from alignment at Sc0000042:1728677..1736607+ >Blg00560.1 ID=Blg00560.1|Name=Blg00560.1|organism=Branchiostoma lanceolatum|type=CDS|length=951bp|location=Sequence derived from alignment at Sc0000042:1728677..1736607+ (Branchiostoma lanceolatum)
ATGCAGGAGCTGAGTCTCTTCGCTTGTGTGGTCATAGTGCTGTATACTTC
TGTACGGATATTCTTCCGTTGCGTCCTGCATCACTGCACAATTATGTTTG
CTGCAGACCAATGCCTTAGCCAGAAAAGGAACACTATCTTGGACATAGGG
ACATGGGCGGACCGGTACCCCCTCCACGACGCCGCGTGCTGCGGACAGGT
CCTCCTCCTGCAGAAGCTCGTGCAGGAAGGAGCGAACGTGAACGCTCGCA
CGCTCAACTCGTTCACCCCGCTTCACGACGCGTGCCTGGGCGGCCACCCG
GGCTGCGTAAAGATTCTGATCGGAGCAGGAGCACAGTTGAACCCACGGAC
CATAGACGGGGACACGCCCTTGACCTTTGCCTGCTCCAGAGGAAGTGTTT
CCTGCGTCAAACTGCTGTTGAACCATGGGATATCCCCGGACCCAGGGCTC
TTCACCAAGTCACCTCTACACGAAGCCTGCTTTAATGGTCGGCACGAGGT
TGTGGAGGTGCTCATCGATGCAGGAGCAGACGTGGCGACAGTCGAGTCCC
AGTACGGCGGCCCTCTGCATGTCGTTTGCAGTAGGAACTACCCGGAGTGC
GCCGAGCTGCTGCTCAGGGCTGGTGCTGACGTTGATGCAACCAAAAACTA
CGAGACTGCGCTGCACGTGGCGGCCAAGGTGGGGAGCCCGGAGGTGGTGC
AGGTCCTGCTGGAGTACGGAGCAAACATCAACGCCAAGGACATCAGCAAA
CAGAGGCCCCTTGACCTGACTGACCCCGGGTCGGAGGTCAGGAAAATCCT
CACATATAGAGATGCTCACCCCAGCCACCTGATGCAGCTGTGCCGACTGA
GGATTCGCCACCTGCTGGGCAGGGAGAGAGTCAAATTTGTGCAGCTGCTG
AGACTGCCTCCCCTCCTGCAGGACTACGTACTCTACAAGTTCTTCAAATG
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00560.1-exon-Sc0000042-1570713199:1728677..1729048 | Blg00560.1-exon-Sc0000042-1570713199:1728677..1729048 | Branchiostoma lanceolatum | exon |
| Blg00560.1-exon-Sc0000042-1570713199:1732345..1732532 | Blg00560.1-exon-Sc0000042-1570713199:1732345..1732532 | Branchiostoma lanceolatum | exon |
| Blg00560.1-exon-Sc0000042-1570713199:1733594..1733744 | Blg00560.1-exon-Sc0000042-1570713199:1733594..1733744 | Branchiostoma lanceolatum | exon |
| Blg00560.1-exon-Sc0000042-1570713199:1734170..1734304 | Blg00560.1-exon-Sc0000042-1570713199:1734170..1734304 | Branchiostoma lanceolatum | exon |
| Blg00560.1-exon-Sc0000042-1570713199:1734799..1734990 | Blg00560.1-exon-Sc0000042-1570713199:1734799..1734990 | Branchiostoma lanceolatum | exon |
| Blg00560.1-exon-Sc0000042-1570713199:1735410..1736607 | Blg00560.1-exon-Sc0000042-1570713199:1735410..1736607 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1728677..1736607 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00560 |
|
