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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1729413..1736607+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00560.0 ID=Blg00560.0|Name=Blg00560.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7195bp|location=Sequence derived from alignment at Sc0000042:1729413..1736607+ (Branchiostoma lanceolatum)
ATCTACATGGGGTGAGGAGCCAGTGAGTAGGCATGCTCCTGGGTTTCATA
CTGTTCCTGCTGGTTGTTTACGTTGCGGTGCGGGTGGTACTGGAATGTGT
TTTCTACCACTGCTCCCTGTTCTACGACTTATATAGTCTGTACGGGAGGG
ACGGCATCCTGGTGAATGGTTGGTGTCGGTTTTCATTCCATGGCAGCCTC
TAGTGTGACTCAGTAGCAAGAGGTCAGGATACGTTATCTGATATTGTTTC
TGGCAACGTTATCAGCTCCCAACGTCATTATTTGAACATAGACCCTTCTA
GACAAAATGGTGGCAAATGACGCAATCATTATAGCTGGGTATAGCCTTGG
TCACTTTGAGATTGTTTTAAAAGTCATTTTGCAAATTTCAAGGTCACCAT
GCTGGAAGCTTAAGGCCACACCAATTTATTTCGTTGGTTCTTGGACATTT
TAAGGTGTAAGTATGGCGTACATCATAAAAGCAGAGGGCAGAGAGAAAAA
AATTGGACGTAACTGTATTTACGGCGTAAAACTGAGTGGGCCAAAGTATA
CATCTGGTCCCCAGGCTTTGTTTTTATTGTGTTTTTCCAGTTTTATAAAT
CCGATAACTAATAAATTGAATTGGTGTGGCTGAACATGTCAATTTTTACT
AAAATTAACTTAATTTTTACTGAATTTGAAATAATGTATTTATCTGTATA
CTATGATATTTTTACTTTGATTAAGCGGATAGTTTTGCATGATAGAATTC
GTATATTGTTACAATAGTAGTAATGTGCGATGTTCTGAAATTACTTGTCA
AAGTGTCTGTTGACGGAAAAATGTAAATCAAGACAAGAAAGACTTTGTAT
GAATAACAGGAGCGACCTCTTAGAATGTTAGGTCATAGCTGTTTATATGG
CGAAGTTCAAGGTCAGTGCCACTTTTAGAAATATGATAGTCGAATATTTT
GCAAGAGAAACCCGAAGGGAAAATTGCATGACTTCGATGGTTCAACTTGT
TTGTCAGACTATAAGCATCTACTTCTTCTTCTTAATCTTAATGCCCGCAG
TCAATTTGCTGACTATTATGGCATATGATGTTTCGAGAGCGCAGCTGGCT
TATGTGACTGGTTGTGTTTCGATCCCCCTGCTAAACATCCTTATTCGTAA
CTATCAAGTAACGTCAACAGTCCATAATCCAAAACTCATAGTCCAGATTT
CGTGCCATGGTCAGTCAACATGGTCAGTCAACATGGTCAGTCTACAAATC
TATGTCTAATCAATGTCGTATAAAGCCTCTGCATATCTGAAACCTCTGTG
ACGAATGTGGTCGCTGTATATCATCTACAATGAATCTACAATGTAGATAC
GAGGGGAAACCTTCAATTGGGATTTCTTTATTTGCAATAGGTTCAACCTT
GAATGTGCTATTTTGGTCTTGTAAGGGAGCAAGCTGTTGCTGGTTGACGT
TTGGTTTCACTCTAACGTTTACGGATTCTATCCACCAAAGTTTCCCATGT
TTTCCCCTGAGTTTGGGATTTGTTCAATGTTCCGGGTGATCTATGGATTC
CATGGATGGGGAGAGGTTACGATAAAAGAGGGTTGGTATAAGTTTTCTCT
CTAAGGCATATTTATATTTCTACTAGACATTGCAACGACCAAAATCGGAT
TTGTTTGACCATTGGTTTTATAATTGAACAATGTAAAAGTATCATTTAAA
AGGCAACATAACACACTACTTTAAAAGATTCATTCTTTATCTTTGAAATT
CGTTGAACGATGTCTAACCCTCGTCATATGGGGAACAGACGATAACTGGA
TAGTGAGTGTGAGGGGTGTATGTCACTAACATTGCATGATGAAATTGTTC
CCTTCTCGGTGTCAAATGTAAGCGCTAACTTTGAAATTGTTTGAAATAGA
CTGAATTCTAATGTCTGCCCAATCCAAATCTATATGGAACATTTTGCCAT
ATGACATGCAATCTGCAACTAAGACTCTTTAAAGCTCCAGGAAGATTAGC
TACTTACAGATAATCAAATTAAAAGTCATTTATTATCCTCTTCTTAAAAA
TATCCAGAATCCACAAGTTCATCAAGAATGGTCAAGACAACAAACGAAGT
AAAAAGGAATTTTTGATTTGTTTTAGTGTATGAGCTCAAGATCATAATTC
ACAAATTATTTACTTGTTGTTGGCTTAGAAGTAGTCATGTTTTCGTCATG
TGGCCTTGTTGTCGTAATGCCAAAACTGCGAAAATGTCACATCTTCTACC
CATGACGTCCCTGCCAACAGTTACGACGTAGTAGTGCCAGTTGTTTTATC
AGTCTTAATTATCATAATATTAATAGTAGAATCTGATACAAATTCAAACA
TGAATATGTTACATTTAGGATAGATTTTGTCTGGTTAGATAACCTATTCC
TTTATTTTGATCTTTAGGGGTTCCAACAGATTCGATAACCTCAGGTAATA
ACTATTAATAAAAGTTGTCCTTGTCCGAAATCTGGGATAAAAGTGTAATT
ACGTAAGGCAGTATGCCAACTGTGGAAAGTTACATCCGATGATGATCAGA
TAGAGGAAACCTTGTGACTTCTGGGTGTTTGTGCATCACCGCTATCCTAT
TTCTGCCTCGTAAACAAGATAATCAGCTGCCAGCATATGAGAGGTAAACA
TCGCATCATAACTTCTCTGCTGGTTCTATTCGGCACTGAAGTTTTTCTGT
GCACTCTTCCTTAAGGATACGGTGCTGTACTCTTGTGCGTCTTAAGGTCT
TTATTGCCTTTAACTCGAGACTCAATTGCAAGAGACAGGGCTGACTGTGT
GTTGTGGTAAGACATCTAGGAAGCTGTTGTACTTGTCACTGAGACGTTGT
TGGAAGTCCATGGCTGGTGCGGTGTGTGTGATTCATAGGAGCATTTGTCA
GACTGGTCAGATCGGCTTGTGCCTTCGGACAGGGACATGGGCGGACCGGT
ACCCCCTCCACGACGCCGCGTGCTGCGGACAGGTCCTCCTCCTGCAGAAG
CTCGTGCAGGAAGGAGCGAACGTGAACGCTCGCACGCTCAACTCGTTCAC
CCCGCTTCACGACGCGTGCCTGGGCGGCCACCCGGGCTGCGTAAAGATTC
TGATCGGAGCAGGAGCACAGGTGGGCAGTTTGTACACGTAGAATGTGTCG
GAGTCACAGTCTTAGCTGATACCAATAACAAGGGCATTCGATACAACACT
TTTTCAGGGACACATTGATTTTTCTTCATGAAAATTTCAAGGTTTGTGTC
GCATTTGAACGTAAGACTCAAACTCAAATTCTGCTTTTTATTTCAAATTT
CCATGTCCACAATCTAGTTATTTTTCTCAGAAACATGCCTGCATACAACA
ACAGTTTTTCTGTTCTATACAGTTTTGTTGTTGTTTCTATAACCAAAACA
GAAATGCATGGCGACTGTAGACATCTCTCTCCCGAGGATGTTCTGTTTCG
GCACAGGACCTCCGCTGAAGTACTCATCCTTCAGTTAAGGCTGTGACGAG
ATGGCTGCCATGCCGTATATATAGTTTGTAGTGTTTGTAACACTTTCTTT
ACAGGTTCGTACGAGGAGTCGTACCTCTTACACGACGCAGCAGCCAACGG
CCAGGCTCATGTCTTAAGAACGTTAATCGAGCAGGGGGCGAACGTAAACT
TCCGCACCCCGGACTGGTGCATGCCCCTTCATGAGGCCTGTCTGGGGGGA
CATTTCCACTGCGCACAGGCACTCATCAAGGGTGGGGCAAAGGTAAGATC
AGGAGGACGCAATGTTTTGCTAAAGGCAGAGGCTATTGACAGGATTGGCG
GGATTTTTTTTACTACTCACTGGATGTTCCTTCCAATAGCCATGGCTTTT
ATTAATCATTCCTCAATATATCTATGTATTTTTCTACAAACGAAGTGACA
GTACAACACTGACGGTGAGGAAAAGGAACGAAAGGACATATAGTATGGAA
GAAGGAAATTAATGATTTACATTTAGAAATATAAGACATTTGTGACTTAT
CTGATCATAAATGAATTGTTAACAGTTAGTCTAGAATAGATAAAATCAGC
TTAATTTGCTACAAGAAGAGACGTGTCAATGACAGGCAAAACACCAAATT
TCTGCAACAGCTATGGTGCGGATAGAGTTTTTTTTAGAGATCTTAATCAT
TAAAGCTGTTGTACATGTGTCAATGTTGAAGTTGAACCCACGGACCATAG
ACGGGGACACGCCCTTGACCTTTGCCTGCTCCAGAGGAAGTGTTTCCTGC
GTCAAACTGCTGTTGAACCATGGGATATCCCCGGACCCAGGGCTCTTCAC
CAAGTCACCTCTACACGAAGCCTGCTTTAATGGTAAGCTGTTTCTTTCAC
TGACTCCGTGTAGGGAGTTTATGTTTTTGATGTGTCTGTGTTTGTCATTT
GAATACACCATCAGTATATTGCCATGAAGTGAGTGGGAAGATGACCGAAA
AGGTTAGACTTGTCGGAGCGGTAGGAAGTATAAGAAGTACAGATCAGAGT
TGGTAGAAATAGTCATTAATACGACATGAAATACAGTCCATAGAAAAGGG
TACAAATGTACTAATTTACTAATTGTCTTTGCAGACTCGCAGTAACTGTT
ATATATCTTTATATTTCTGTACTTGAGTAATATTGAAGAGTTCTCCAGTG
CTACATTGAACCTTTCTGCCAGTCCTTTTTTTCATGATCAGTGTAGAAGG
TTCCAGTTATATCTGGATCAAGAGACTTACCGGTAGTTTTTCCTGCTTTG
CATCCAGGTCGGCACGAGGTTGTGGAGGTGCTCATCGATGCAGGAGCAGA
CGTGGCGACAGTCGAGTCCCAGTACGGCGGCCCTCTGCATGTCGTTTGCA
GTAGGAACTACCCGGAGTGCGCCGAGCTGCTGCTCAGGGCTGGTAGGTCA
AGGTTATGATATCTATCAGATATCTGTGGTCTGGGCGTACAAAAAAATGT
AGTGGTCCTGCTTCTGGGCTGGAAAATGACTCCAAGCAGCCTGTTGCATG
TGGTCTGCAGTAGGGGTTACTAACCAGAGTACGAAGAGCTGCTCATGAAG
GCTGGTAAGTAATGTATTTGGACAGTTTGCACTCACAGAGAATATGTTCC
ATAGCTTGGATAGGATGATCACATTGACACTGTGCTGAGTCCACCCGTCC
CCGTTTCAGGAGGTTTGCTCTAGTTATTTTGATCTACTCCGCTCCGCTCC
TGCTCTAATGAGGGCTTGCACGTAACAGACATAATATACTCAGGACTTCT
TTAGCACTTTTGGTCCAACTTTTCAGTATATTTAATTGTATCCTCTGTAA
AAGTCGACTTGATATGACTGGATGATGATCACCTTTTCTTTGAAAAAAAA
AAGAAAAGACAACAACAATTCATCTTTTGTGTCCAGGTGCTGACGTTGAT
GCAACCAAAAACTACGAGACTGCGCTGCACGTGGCGGCCAAGGTGGGGAG
CCCGGAGGTGGTGCAGGTCCTGCTGGAGTACGGAGCAAACATCAACGCCA
AGGACATCAGCAAACAGAGGCCCCTTGACCTGACTGACCCCGGGTCGGAG
GTCAGGAAAATCCTCACATATAGAGATGGTGAGTTTATGAATCTAGATTG
GAACTTGTCAGCTGCTAATTGTGTATGTAACTGTCTTTTAGTGCAACATT
CCAGATTGAATATTATTGTCATGATAGTTTTCTCTTTTCCACATTGAATT
TCGCTTTAAGAGACATTAAAAATGCCTCATTTGTGTAACCATGCATTTTT
TATGTAGTGCACACGTCACCCTGTCAATAGTGCCTTATATACAGTATAAT
GTATCACTGGTCTAAATGAGTCATTGTTGTGTCATCTCTTCATTTTCAAT
ATTAGACATCTTGTAGTTTTTCTTCAATAACTGTTTCCTTTTTGAATAGT
TGAATCAGCTTTGATACATCTCCAGACAAGGCTTTGATAACTTTAAGTTA
GTACTATGGGTTTCAAATTTTTCACACTTTCTGACCATTTTCGTCAGCTC
ACCCCAGCCACCTGATGCAGCTGTGCCGACTGAGGATTCGCCACCTGCTG
GGCAGGGAGAGAGTCAAATTTGTGCAGCTGCTGAGACTGCCTCCCCTCCT
GCAGGACTACGTACTCTACAAGTTCTTCAAATGATCTGCAGAATTATCTT
CTTTTGTGTACAAGACAAATCTTGAAATAACCTCCTAAGGCCGTTGTCAC
ACTGTACAAATGTAGTTGACGAACTTTGGCCACATTTGCTGATCACCTGG
CCAGAAGGTCATTGAATTAATAGATCACCAGAGACTTCAGCATATTTTCT
CCTGAAAATCCACATACTCTACAAGTTCTTCAAATGATCTGCAGAATTAT
ATTAAATTTTCTAATTACCTGCTAATGCCCCTGTCACACAGCCGATGAGC
TTTGATTGTTTTTGTTGCTTTCCAGAAGTGTATTATTGTCTAGATATAGC
CAACAGTCGTATTTAGTAGTCTATTGTTACAGCAAAGTCAGTCACAGTTC
AATGTCACATGTATGTTTTCCCCTACATTTCCACAATGTATTTGCAATTA
GCCCATGGGCATGAACTTGCAATAAAACTTTCAGTAGTCATCTGAAAATC
TACTATTTTTTGCACCTTATCACATTGCTTGGAGACCTGTGAACATCGGC
TGATCGCTAAAATCGTGCAATGATCGAAAGAACACTGGGCGTCTTAAAGC
TTTCTACCGAAAATGTCATTTAGAGATTTTTCTGATGTGACAGGGTCATA
AAAGACATGGTCGTGTTCAAGTTCTTAAAATGATATCTTACAGAACAGTC
TTCGAAAAGGTCTTGAAATGACCTCCTGCAAGACATAGGAAATAATCTTT
TAATCTATTTTAAAATGTTGTACTGTGATGATCATTGACCTGATTAATGT
AGAAAGTAGCTGTATGAGATTGACATAAAGACCGTACCTGTGTTTGTATG
TAAATGATATGTTAAGATGGAAAACGGGTAATGGAGGAATACAGCAAATG
CAGAGACTGAAAAACAGTTTGTATAGATGTTCGTATAATGTATTCTGTTT
GTAAGATGTTACTTAGATTGCAATGATTTGACGAAATTGCAAGGTGAGGT
AAAATATATATCAATTGACAATATGTTGCAACCAACTGAATGGTTTATAT
TGTAAATACAGTTACCTTAAAGGTATAGGAGTGTGGTGCATGTGT Coding sequence (CDS) from alignment at Sc0000042:1729413..1736607+ >Blg00560.0 ID=Blg00560.0|Name=Blg00560.0|organism=Branchiostoma lanceolatum|type=CDS|length=939bp|location=Sequence derived from alignment at Sc0000042:1729413..1736607+ (Branchiostoma lanceolatum)
ATGCTCCTGGGTTTCATACTGTTCCTGCTGGTTGTTTACGTTGCGGTGCG
GGTGGTACTGGAATGTGTTTTCTACCACTGCTCCCTGTTCTACGACTTAT
ATAGTCTGTACGGGAGGGACGGCATCCTGGTGAATGGGACATGGGCGGAC
CGGTACCCCCTCCACGACGCCGCGTGCTGCGGACAGGTCCTCCTCCTGCA
GAAGCTCGTGCAGGAAGGAGCGAACGTGAACGCTCGCACGCTCAACTCGT
TCACCCCGCTTCACGACGCGTGCCTGGGCGGCCACCCGGGCTGCGTAAAG
ATTCTGATCGGAGCAGGAGCACAGTTGAACCCACGGACCATAGACGGGGA
CACGCCCTTGACCTTTGCCTGCTCCAGAGGAAGTGTTTCCTGCGTCAAAC
TGCTGTTGAACCATGGGATATCCCCGGACCCAGGGCTCTTCACCAAGTCA
CCTCTACACGAAGCCTGCTTTAATGGTCGGCACGAGGTTGTGGAGGTGCT
CATCGATGCAGGAGCAGACGTGGCGACAGTCGAGTCCCAGTACGGCGGCC
CTCTGCATGTCGTTTGCAGTAGGAACTACCCGGAGTGCGCCGAGCTGCTG
CTCAGGGCTGGTGCTGACGTTGATGCAACCAAAAACTACGAGACTGCGCT
GCACGTGGCGGCCAAGGTGGGGAGCCCGGAGGTGGTGCAGGTCCTGCTGG
AGTACGGAGCAAACATCAACGCCAAGGACATCAGCAAACAGAGGCCCCTT
GACCTGACTGACCCCGGGTCGGAGGTCAGGAAAATCCTCACATATAGAGA
TGCTCACCCCAGCCACCTGATGCAGCTGTGCCGACTGAGGATTCGCCACC
TGCTGGGCAGGGAGAGAGTCAAATTTGTGCAGCTGCTGAGACTGCCTCCC
CTCCTGCAGGACTACGTACTCTACAAGTTCTTCAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00560.0-exon-Sc0000042-1570713199:1729413..1729580 | Blg00560.0-exon-Sc0000042-1570713199:1729413..1729580 | Branchiostoma lanceolatum | exon |
| Blg00560.0-exon-Sc0000042-1570713199:1732345..1732532 | Blg00560.0-exon-Sc0000042-1570713199:1732345..1732532 | Branchiostoma lanceolatum | exon |
| Blg00560.0-exon-Sc0000042-1570713199:1733594..1733744 | Blg00560.0-exon-Sc0000042-1570713199:1733594..1733744 | Branchiostoma lanceolatum | exon |
| Blg00560.0-exon-Sc0000042-1570713199:1734170..1734304 | Blg00560.0-exon-Sc0000042-1570713199:1734170..1734304 | Branchiostoma lanceolatum | exon |
| Blg00560.0-exon-Sc0000042-1570713199:1734799..1734990 | Blg00560.0-exon-Sc0000042-1570713199:1734799..1734990 | Branchiostoma lanceolatum | exon |
| Blg00560.0-exon-Sc0000042-1570713199:1735410..1736607 | Blg00560.0-exon-Sc0000042-1570713199:1735410..1736607 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1729413..1736607 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00560 |
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