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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:589782..596716- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00558.2 ID=Blg00558.2|Name=Blg00558.2|organism=Branchiostoma lanceolatum|type=mRNA|length=6935bp|location=Sequence derived from alignment at Sc0000042:589782..596716- (Branchiostoma lanceolatum)
CCGGAACCCCTCCTCTGCTTAGAGGGTAAGGCAATTTCCCCACCCGTCGT
TGCGCAGGAAACATCACTGTGTACGGAGAGTCGGTGTGGAGACCGGACAA
GGGGCGGGTGTTCGACCTGGACATGCAGTGGGGCGGGGGCGTGGTGTACG
CCGACGAGAACGAGACCAGGAGCGAGAGCTACGGCAGGCGGTTCGGAGTC
AAGACTGTCGTGCCGATGTTGGACCTGTCCTCGTGGATACAAGACAACAC
AGGTGCGTTTTTTTAATCATTATCATTCAAAGAAGACATCAAATAATATA
AATGAATGGACATTTTGGAAAATGAATGGATGCTCAAATGAGTGAAAGAA
AACATGTAAATACATGACAAAAGCCTACTACATGTAGTTTAAATGTGAGT
CTAAACCCACTCCTAGAGGAAAAAAAGCAAAAAGGACACAAGACACAAAG
AGGAGAAGTGCGTTTGGTATACGCTATAATCATTTTTAGAAAAGAGAAGG
TTGCGCCGGGCTTTCGGAAGCTGTCCTTATGGATACAAGAGAATGCACAC
TTTCTGTCAGAAAAACAAAATTCATGGCAGGCCATTTGAAGCTAAGACTG
TCTGAACGATATGTTTACAATAGAATTATACTGAAGAATTTCATTTTTTG
AGTCGTTCACGGCATGTAAGAGTAGCTGATAACAAGCTAGCCGGCCAACA
GAAATTGCAGTGTATATAAACGCTTACGTTTGGTTTGGTACACTTCAAAA
TGACGGTCCTTGGTTTCTTCTCTGGTCGTTCTCCGTATATTCCTTATGAA
ATCCTCATTCATCTACATTTTGTCTACAATGCCATCCTTCCTAATGCAAT
CCTCACCAGTGTTGTTTTTATTTCTCATCTAGCAATCGAAGATCACGTCA
TCTTAAAGATAGACGTGGAGGGATCCGAGTACGAGATTGTGGAAAAGATG
CTGCAGGACGGGACCTTCAAATGGATAGACAAGTATGAACTGACAACCAC
TCTATGCAGTCAGTGCAACAGAAGTTATGTCTTTTCTAAAGGCTTTGGCA
AATCCCTTTTTTCTAGGTCTCGTCTGATCTCTCAATAAGGTGCGTGAACG
AGATCAGTCGTTTAACTAAGACGCGGTCACCATTGTCAAATGACCATTAT
GTCCTAAGATTTTTAACGAGGCTATGACAGATCTAGAACCGACCGTCGAC
AAGAACCTATAATAACCTTTTGTGGTCATGAAACTGTCAGACTTCGTACG
ACACACCTATGAATGTCCCAATAATGCCCTCAATTTAAACGGGGCGCACT
ACGGCAAGGGTGGCAGGGGCCTAATCACCATATCTTATATTTACTTAAAG
AATCGCGCAGACATGTGCGTCTGCGTGCACGTACCATTTTTCTGTACACA
GAGACAGAGTTTGTACATCAACCGATTGCTCTATCCTTTCTGAGGTTCTA
CGCGGAGTTCCACAACGTTAGCTGGGCCCCTGTGCCGGGCTGGTCCCAGC
AGAGGAGGGACGACTTGGTGAGGACCTTAGAGAAACAGGGCAGCATGTTC
CTGTACTGGGAGGGGGAGAGCCACTATTACCAGGACATGGAGGAGCTACA
CAAGCCGGACGTGAGTCTTTTACAACACTTATAGTTACATTATACAGGGA
GGGGGAGAGTCACTATTACCAGGACATGGAGGAGCTACACAAGCCGGACG
TGAGTCGTTGACGACACTTACAATGATCAAAGTTACTATTTACGTACGCA
CCCCTCCTAACGTACGCACCCCCGATTTGGGGACGATTGCGGGCCTGACT
CAGTGAGTTGAAACGTTCAGGGGAAAAACCCTCCTAACGTACGCACCCCC
TCTTCAGCATTTCGGTGGACAGTTAAGAGGTTGATATGAATGATCATCCT
TCCGATGATGCTTACCGGCTTAAAGGGTTACTGAGAAAATGTTTCTGGGT
AGAAAATATCAAATAATTTAAATATATGTATTCTTTATTCTTTATTACTG
ATTGATTGTGTGGTAGCATTCCACACTTCATTTGCATGAAGATGTACCAT
ACCCTCATGCTGATATGCGATTTTTCCAAGGAAGAACCCCTCCTAACGTA
CGCACCCCGACTTTGGCGTTTGCCTGGAGCACCTGCTTGCAACTTGAAAA
GTTTAAAAAGTGCGTACGTAAAATAGGGATTTTACGGTAATTGCAAGTAC
ATGCCCGAGGGCTAATCCGTGCAGGTACAAACAACACATATAATGATGAA
TACGATGATATTAAGGGCTACATCCAATGCTATGCTACATTAAAAAAATG
TACATGGTACTAGTTTTGTTGGGTTTCATTTCTTCTTTTGAGGCAGTGGA
AGACGAATTTACTTACTCATTTCATAATTTGTGAGTTTTTTGGTTTTGTA
CCATTGTATAATTGTACGATTACAAAACATTATAAAGGTGAATTTACAAC
ACTTACAACTACAAGACAAGATATTTCCAAAATCTTCCAACCTATTGGAG
GAGGTTTGCGTCCTCTGTGGTTGACAAACTTTAATTATTTGAATGTTCCT
CCAGATTCCAGCCACCACCCCCGGATCCCCAGGAATGGTCTACTCCGAGT
GTTCCCGGTCGCCAGGCGGCGCTGCTAGACTGGCACTGACAGTTCAGGTG
GGTTTTGTGAATGTCAGTCATCCAGGAAATTGAATAATAAAATGTGTATT
CAGTCTATGCCACTGGATTACAATATGAAAATATCAGACGTTTCAGACGT
CCATCTGATACCTTTCTTCAGTGATGAATGATTCAGATCTCCATCCAACA
TCTTTCTTCAGTGATGATCACTGATAAAAGATGTCGGACGGACATCCGAA
ACGTTTGATATTTCATATCGTAATCCAGTGGCATAGATTGAAACAAATGC
TTTATCTGCAGGTAGGTATGGACGCTAAGGCGGCGTTCCGGCTTGTGGAG
ACCATGCGGGCCCATCCCAGCAACATGCCGGTCGCTCTGTTCGTGCACGG
CAACTTTGCCCAGCTCTACCCGGACCTGGTCAGCTCGTGGGCGGAGCGAT
ACACCATCGGCATAAGAGAGGTAAAACGTCTGTTTCATGCGTTTCATTGC
ACGATGTGTGGGGGACTCACAAGAAGATGCTTGCTAGTTTGCCGTTTTTG
GTCTTGGCAACGATGACAATCATCGCCAGTGGTTGAGTGCCTCCACGGAA
ACTTCACGAGTGAACAGTCAGTACATGCTATGGACAGTTCTGCATTGATG
CCCTCACAGGCCAAACTGATTCGGGATTACCACCCCAACCTGCTCCACTG
TCCCTCCGCTAGAGTTGCATCGTACCGTAGTAGTATGCAACACTATGGGC
CTCAGTTGTGGAACACATTACCACTCAAACAAAGAACTGCTATTACTTAC
CAGAACTTTAAGAATGGCAATCCCGGCGGAAATTGAAATCTGAATTGTAT
GTGACTTGGCTTTTATTGATTGATTATTATTGTTACGGTGTACTATGTCG
TAGTTGTGTTTTTTATATGTAATATCAGGGATACCTGAAAAACAGGCTTC
ACAGCCTGAGTTGTATTTCCCCTGTATAAATAAAATGAAATGAAAAGGGT
TTCTCAATTCTTACACTTGGCCATGACCTTTTCTTGACAGATTTGCTCTC
GTTGTCAAGGGTATCTTTCGAGCCCCGAGGCCCATGGAGACCAGTGGCTG
CTAGAAGATTTAGTCTAGTTTCTCACTCGGGGGAACGTTTTGAAATATAC
AGTAGTCAATACAACACGGTGTATTCCGTATCACCCGTATCACCTATACC
CGAAAAAACACATTTAAATGCGAAATGCGCCAGATGTTGAGAGAATTTTG
AGTCCTAGAACATAGAAAATTGTAACAGCCGCAACTCCAACGACCGAATC
CGGTATTCGCATTTTCGACAGCGGCGCGTGAGGTGCGTTCGAATCATCCG
ATGGAAGCCCGTGTGACAAAAGTAGAAGCCCGTGTGATAACCCAAATTAA
TCCAGAACACCCATATCGAACGTTTTCGCGGCCCAGGTATGACATAAATG
CATGTACTTATACTGCGTGTACCTCAGTTTACCGTCTCCACACACAGCAC
CAGCCGTTTCCAGCGGGCCACTGGACGCTGCAGAACGCAAACGTGATGCG
CATGAGCGTGATCGCCTCCGTGCGGCGGCTGAGGGAACTGCAGCTCCGCC
CGGCGTACTACCTCCCGGACGGCGTCACCGAGAGGGTGAGAGACGTGGCC
AAGAAGAGGGGACTCCGGATCGTCCAGCCCGCCACGAGATTCCCACCTGT
TACAGGTAGGTCGCTTCTGTCGCGAACGGGGCAATGATACGAAGTTCGAT
ATCCCTGTGCGGCACCTTTCACAGGGTCGGTGTGGGAACCATTGGAACAC
AACATGGAGGCGAGTAGAACAGCCCACAGACCCTACGCGCTAACCACTAG
GCTAAAAGGTGCGAACCAGTCAGACTGGTCAGTTGGTGGCGCTTGAACCC
CACGGTTGCACGTTAATGAAGGTTAGACATCCAGGTCCAGAATATTCTAA
GACTGGATAAGATACGGAGATTTACTTCCGGGCGTTTCGAGTGATATCCA
CCACTCTTCTTCAGCGTCAATGGTACGTTCTTGAGGCAATGGTGCATTTA
ACCCCCATGCACTTTCGAAAATAATGTCATCAGGTTGGTAGTCCATAGGA
TATTGGAGTTTTCTTTTTACACAACCAGTGACTTCTTACCTGCTGACGTT
ACGGTGTCTGTCAGACACGTTCTTCAGAGCTTCTGACTGGAGTACTGCTT
CTCGCCGCAATAAGAAGCCGATGTCCGAATCCCAAATGCGGCTAAGCTTG
TATCCCCCTGAGAGGGGGCAAGGTAATCGACAGAACGGATAACAGACGCA
TCCGATGGATCAAGGTCAGGCTGTCTGGATATGAAAGTCAGCACCAGTGA
TGAACCGGGACGAGGGGGGAATACAAGCTTATCCGCATTTGGGATTGTGG
TCACCGACACGTCGGTTGAATAAATCACTTGGTTGAGTGTGTGCAATGAG
TCTTCTAATTCACCTCTTCCCCTCCCCACAGGCACGCTGCTGGGCGAGGA
TAACTACTACAGGGTCCGTGACGTGGAGAGGACGCCCAAAGTGCTCCGCA
TCCTGCACGAGCGGTTCGCGCACGGCGGGATCCTCGCGCTGGACACGGAC
CACCCGGACAGCCTGCTCATCTCGGTCTTCCTTATGGACTATCTACACCA
AGTCTCCGGCTTCCAACTCGTTAGTCTGGACGGCTGCTTGTGACCGGTCC
TTTCTGTCTTCTTTCTTTCCCTTTATTAGTAGTATCGTCAAACCTTTGTC
TCATGACTTGTGTAGTCCGATTTCTAATATTCAGTTTTAAATGTACATAT
CATATATGGCCTTAATTTGTTAAGCCTATCAAAGGGTATTCATAGCGTAG
GGACGCTTTCAGCCAGTACATTCAAATCTATTTTGGTTCACTCTGAAACA
CATGAGTTCATGGAATTATTAAATCAAATCACAGACAGAGTTAAGAATCT
TCTTTTAATGCCATGGCACTTGCTATTATGGTGCAGTATCATTCTTTTAA
TACTACAGAACATTTGCGGATATGTCTTGATAATGAACACAATGTTCAGT
TTGACTGACATTTGAGTCTATATGTTAATACTGATCTGTTACAATGACAA
AGCCAGTGTCACAACCAATAAGAGATGTTAGCATTAGATTTCATCTGTTG
TTAACATAGTAAAGAAACTTTGTTACAACATAAAATGTCTGTGCATCAAA
TTTTCTTACTGCAGTCTTTCTCATTCAGAGTTCAATTGGCCAATCACCTA
GATCAAATGGATTATGAGGGAGGGACAACAAAACGTGATATATACTCTCT
TTACAGTATTTCTTTAACAGTAATCCAATACAGAAGTAGCAATGTTCAAC
CTGCTACAATAGAGTGCAAAGCATATATATGACATAGCTACAGTCAAACC
TGTACAAGTGACCACATTAAGACTACATGAGTGGTTGCTGTTGTCCTTGT
TTAATGTCTATTTCTCCGCTAGACGTGGTTTCATGGTGTTATAAGGACCA
CCTGACCAATGTGACCATTTTTGGTGGTCTCTTAGATGATTTTTCCACCG
ACACAGGCAGGAAGAATCCTGTCTATAGGGACCACCTGTCTACATAGACC
TAAGTTTATCGGTCCCATGAGCGGTCTTCTTGGGCAGGTTTGACTGTACA
TGTACATGTAATCTTTGTAAGTTTTGCTGTAATACTGAAATAGTACAATG
CATCCTATCATATTATGAATTATTCACAACAATTCAGTGGCAGAGCCTTA
TTAATACTTATTTCGTGTGCTTTTCTCTGAGGGCCACACTTGCATTCAAT
TCTAAAGACACAAAAGCACAAAACCTGGGTTACTTTTTTTTAACATTGTG
CTGACAAGATTTGCTGGCAAATAAAAAAAATTCTGACACTTCTCTGGTAC
CCTGAACAACATGCACATAACCAGACAGCAATTTCAATTTTAGAAATCAA
ATTTCTTCTGAAATATCTTTCTTTGCAAACATACAAAATGATAAATCCCT
GGTTGCAAAATAACATTATTACACCGATTCCCATATACAAAAGTTTGTTA
CATGGTACATAAATAAATACAAATACCATAGACTAGATTTTACTAATCTT
TGTCTTAGTCTCTACTATTTTACTATTTTTTTCATAATCTTTATCTTAGT
CTCTACTTTGTTAAAAACAAAGTCAGCATGCAGATCCTCCTAATTTTTCA
TATTTACAAAAATTCTGTTAATATTTCTACTCAAGCATGGGGGAAATACA
ATTATCATATTTGCTATAATTAATCTTTGTGTTGTCGTATTTGTAAATGA
GTTTTTATATCTCACTGTTCTTGCTAAGATATGAG Coding sequence (CDS) from alignment at Sc0000042:589782..596716- >Blg00558.2 ID=Blg00558.2|Name=Blg00558.2|organism=Branchiostoma lanceolatum|type=CDS|length=1068bp|location=Sequence derived from alignment at Sc0000042:589782..596716- (Branchiostoma lanceolatum)
ATGCAGTGGGGCGGGGGCGTGGTGTACGCCGACGAGAACGAGACCAGGAG
CGAGAGCTACGGCAGGCGGTTCGGAGTCAAGACTGTCGTGCCGATGTTGG
ACCTGTCCTCGTGGATACAAGACAACACAGCAATCGAAGATCACGTCATC
TTAAAGATAGACGTGGAGGGATCCGAGTACGAGATTGTGGAAAAGATGCT
GCAGGACGGGACCTTCAAATGGATAGACAAGTTCTACGCGGAGTTCCACA
ACGTTAGCTGGGCCCCTGTGCCGGGCTGGTCCCAGCAGAGGAGGGACGAC
TTGGTGAGGACCTTAGAGAAACAGGGCAGCATGTTCCTGTACTGGGAGGG
GGAGAGCCACTATTACCAGGACATGGAGGAGCTACACAAGCCGGACATTC
CAGCCACCACCCCCGGATCCCCAGGAATGGTCTACTCCGAGTGTTCCCGG
TCGCCAGGCGGCGCTGCTAGACTGGCACTGACAGTTCAGGTAGGTATGGA
CGCTAAGGCGGCGTTCCGGCTTGTGGAGACCATGCGGGCCCATCCCAGCA
ACATGCCGGTCGCTCTGTTCGTGCACGGCAACTTTGCCCAGCTCTACCCG
GACCTGGTCAGCTCGTGGGCGGAGCGATACACCATCGGCATAAGAGAGCA
CCAGCCGTTTCCAGCGGGCCACTGGACGCTGCAGAACGCAAACGTGATGC
GCATGAGCGTGATCGCCTCCGTGCGGCGGCTGAGGGAACTGCAGCTCCGC
CCGGCGTACTACCTCCCGGACGGCGTCACCGAGAGGGTGAGAGACGTGGC
CAAGAAGAGGGGACTCCGGATCGTCCAGCCCGCCACGAGATTCCCACCTG
TTACAGGCACGCTGCTGGGCGAGGATAACTACTACAGGGTCCGTGACGTG
GAGAGGACGCCCAAAGTGCTCCGCATCCTGCACGAGCGGTTCGCGCACGG
CGGGATCCTCGCGCTGGACACGGACCACCCGGACAGCCTGCTCATCTCGG
TCTTCCTTATGGACTATCTACACCAAGTCTCCGGCTTCCAACTCGTTAGT
CTGGACGGCTGCTTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00558.2-exon-Sc0000042-1570713199:596465..596716 | Blg00558.2-exon-Sc0000042-1570713199:596465..596716 | Branchiostoma lanceolatum | exon |
| Blg00558.2-exon-Sc0000042-1570713199:595735..595834 | Blg00558.2-exon-Sc0000042-1570713199:595735..595834 | Branchiostoma lanceolatum | exon |
| Blg00558.2-exon-Sc0000042-1570713199:595107..595272 | Blg00558.2-exon-Sc0000042-1570713199:595107..595272 | Branchiostoma lanceolatum | exon |
| Blg00558.2-exon-Sc0000042-1570713199:594070..594162 | Blg00558.2-exon-Sc0000042-1570713199:594070..594162 | Branchiostoma lanceolatum | exon |
| Blg00558.2-exon-Sc0000042-1570713199:593647..593805 | Blg00558.2-exon-Sc0000042-1570713199:593647..593805 | Branchiostoma lanceolatum | exon |
| Blg00558.2-exon-Sc0000042-1570713199:592412..592619 | Blg00558.2-exon-Sc0000042-1570713199:592412..592619 | Branchiostoma lanceolatum | exon |
| Blg00558.2-exon-Sc0000042-1570713199:589782..591635 | Blg00558.2-exon-Sc0000042-1570713199:589782..591635 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:589782..596716 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00558 |
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