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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:396602..403163- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00538.1 ID=Blg00538.1|Name=Blg00538.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6562bp|location=Sequence derived from alignment at Sc0000042:396602..403163- (Branchiostoma lanceolatum)
GGTATGCCATGCACGCTGCCTTTCCAATTTTAGTCGGTGAGCTTCTCTGC
CTGACTTCTCTGGCTGGCTGATACGATTTTGCCACCGTAGAGATCTGCTT
GGAGATTTGATAGTCAGGAAGCACTGGTCGGTCAGTTTAACACAGTCAGC
GATATCACCAACGTTCACGAGGGAACCGACTCAGCGATGTCGTCTCAAAT
CACGCAGGTGCGGCCGGACGCGGTGATCGGGCACGGCGGCGCGAGTCTAG
AACTCGTCAAAACGTTTGGGGAGGGGGGCAGTGAAGATGACCAGTTTAAC
GCCCCGACCTCGCTCGCTGTCACCGCAGATGGAGACATCGTCGTGGCAGA
TGGCGGCAACTTACGCCTGCAGTATCTGGACAAAGATGGCTCCTTCAAGA
AGAAGGTCGATCTGGAGTTCAAGCCGGAAGATGTGGCGGCACTGACAAAC
GGTCAGCTGTTGGTGACAGGAGACGGACACGGGAGGATTCACGTACTGGA
CAATGAGGGCGTGGAGTCACGTGTCATCCAGGTGGCAGGGGCTGCAGAGA
CATGGGCATCTACACAGGGGATCGCTGTTGACGGTTTGGGGCGCATCATC
GTCACTATTGGGTACCAGGTTTTCGTACTCAGCCCCAGTGGTGACGTCAT
GCTGAAGTTCGGGGACGAAGGTCAAGATCAGCAGCAGCTCGGTCCCGACC
TCCTTGTGGCCGCCAACAGCACCAACCAGATCATCGTCAGCGACTTAAAC
AACCACAACCTGAAGATATTCGACACCGACGGTCGTCATCTCTTCACGTG
CGGGTCACAAGGCCCCGGACCTGGTCAGCTGGAGAACCCCCGGTCTGTCA
TCACGGACAGCGAGGACAACATCATCGTGGCTGACTTCTACAACCATCGC
GTTTCTCTGTTCAGTCCGGACGGCACGTTTATCAGGCACGTGGTGATAAA
GGAGGAAGAGATCATGTTCAGTATGTTCAATCCTACGGGACTGGCAATGA
CTCCAGATGGGCACTTGGTCGTTTCTGAATTCCTTTGCATGATTAGTTTC
TTTTTGTTAAGTTAGATGGATAAAGACGGTTCCTTCTTAGGAAGGTCGAT
CGTGTGTGGCGGCCCTGACAAACGGCGAGCTGTTGGTGACAGGAGACGGA
CTCCCCATGCATGCCCTACTTGTTCACTGTCCCTTAAACTGTGTTAATGT
GACTTTATTTTCCGCCATTGCCTGCTGACAACGCCCCATTTCTGTCAATC
AAAAAGGTTATTCCCTGTCAATAGTGCAAAAAAAGGCTTATTGAAAAAAT
ACTTATTCTCGCACCATAATTAAGCGTGATCATGCTTAGCGTTAGGGTTA
TATAAAGGTTACGGTTGGATTATGTTTTATTCACAGGAACTGTGTCTGCA
TCTATATAACCACCGTAACACACCAGCTGCCTGTCAATATAGTAAATTCA
AGCTAAGCATGTCGTGTGAATAGCGGGGGGAAATCCTCATTGGATCGATA
GCGGGGAATAATTAATATTGACAGGCTAGCCCCTCCAGCGTCAAATTAGA
AATTGGTCATTTATCTACATTAAACTAGATCATGCAGACAGTAGAGTGGG
TTTCTATATGCAGTAGGAAAAAAGGCAAAATGCTGTAAAAGATTCTATAT
GCTGTAGGATAACAGATAACGGCATGCTCTCCCATATATCTATCTTACAC
TCTACATTCGATGTTTACAAGACCAAAATATGAGTTTTCTGTCATACCAA
TTTTTGTCCACATTACCGTATTCAACAAAGACAAATAAACGTAGGTTTAT
ATCAATAGAGGCGAAAAGGTCGCTACCGTTGTACGCCATTCTAAATATCT
CTCTATCATCAACTGTTTTAAGAATGTTAGATGAAACTTTGTACTATGGG
AGACGTTGGTAAGGTTGGAAAATGTTTGTTAACATGTTGGTCAATAAAGG
ATTGTTTGAAGCACTCTGGGAGTGTTCTTTCTCGTCAAACTACTGTTCAA
GTCCATTTCATTTCATAACAAACAGGCCTGCACCCCTCCGAGCACCACAC
ATGGAACGTTCCGATGTGACGTCAATATCTGACCCACATATGACAGTCAA
TTTGGTATGCCATGCACGCTGCCTTTCCAATTTTGACCCAATTTTAGTCG
GTGAGCTTCTCTGCCTGACTTCTATGGTTGGCTGATACGATTTTGCCACC
GTGGAGATCTGCTTGGAGATTAGTCAGGAAGCACTGGTCGGTCAGTCAGT
ATCTCATTTTAAAAATGGCGTTCAACACAATCAGCGATATCCCCAACGTT
CACGACGGAACCGACTCGGCGACGTCGTCTCAAATTACGCAGGTGCGGCC
GAACGCGGTGATCGGGCACGGCGGTGCGAGTTTAGAACTCGTCAAAACGT
TTGGGGAGGGGGGCAGTGAAGATGACCAGTTTAACGCTCCGACCTCGCTC
GCTGTCACCGCAGAGGGAGACATTGTAGTGGCAGATGGCGGCAACTTACG
CCTGCAGTATCTGGACAAAGACGGCTCCTTCAAGAAAAAGGTCGATTTGG
AGTTTAAGCCGGAAGATGTGGCGGCACTGACAAACGGTGATCTGTTGGTG
ACAGGAGACGGACACGGGAGGATTCACGTACTGGACAAAGAGGGCGTGGG
GATACGTGTCATCCAGGTGACAGGGGCTGCAGAGACATGGGCATCTACAC
AGGGGGTAGCTGTTGACGGTTTGGGGCGCATCATCGTCACTATTGGCAAC
CAGGTTTTCGTACTCAGTCTCAGCGGTGACGTCATACTGAAGTTCGGGGA
CGAAGGTCAAGATCAGCAGCAGTTGGGTCCCGACCTCCTTGTGGCCGCCA
ACAGCACCAACCAGATCATCGTCAGCGACTTAAACAACCACAACCTGAAG
ATATTTGACACCGACGGTCGTCATCTCTTCACGTGCGGGTCACAAGGCCC
CGGACCTGGTCAGCTGGAGAACCCCCGGTCTGTCATCACGGACAGCGAGG
ACAACATCATCGTGGCTGACTTCTACAACCATCGCGTTTCTCTGTTCAGT
CCGGACGGCACGTTTATCAGGCACGTGGTGATAAAGGAGGAAGAGATCAT
GTTCAGTATGTTCAATCCAACGGGACTGGCAATGACTCCAGACGGGCATT
TGGTCGTTTCTGAATTTCGTTGCATGATTAGTTTCTTTAAGTTAGAAGGA
TAAAGATGTTTCCTTCAAGGAGGTCGATCTGGGGTTTAGGCCGGGGGACG
TGGCGGCCCTGACAAACGGCGAGCTGTTGGTGACAGGAGACGGACTCCCC
ATGCATGCCCTACTTATTCACTGACCCTTAAACTGTGTTAATGTGACTCC
CTTTCCCCCATTGCCTGCTGACAACGCCCCATTTCTGTCCATCAAAAAGG
TTATTTCTTGCCATTAGTGCAAAAAAGTCTTTGAAAATAATGTTATTCTT
GCACTATTTTACGTGATCATGCTTAGCGTTATATAAAGGTTACGGTTAGG
ATTATGTTTAAATTCTATTCACAGGATCTAGGAACTGTTTCTTTATCTGT
ATAGCCGGTACAACCGCCATTCGGCGTAACACATCCGCTGCCTGTCAATG
GTGAAAAACATTCAGGCTCAGCCTGTCAATAGCGGGGGGGAAATCATTAT
TGAATCGATAGCGGGGAAGAATTATCATTGACAGGCTGTCAAGTTAGAAA
CGCCAAAAATAATTACTCAAGCAACTGGATAAGATTTTGAAACAGTCAGA
CGTTTCAGACAGTATCCACTGTCTTTCGTCAGTGACTAACGATAGGACTG
AGAACACCAGCTTTATACCAAAACTCTGAATAGATATGTTAATGAGGTAA
AGACAATTTAGGATGTCTTGAAGTAGTCTTCAAAAAGAAGATTAATTCAA
GACAAAGTTTATGCCAATAGTTCAATTAGCTACTGTTGTTCTAGTACAGT
AACTAAATGTTGCTTGTCCGGGGGTGGGGGGTGGTGGGCAGTGCATTATC
CCAGGTGCCTGAAAGTTGAACGCGTAGACCCCCTTTCCTGTTGAGGGCGG
GGTTGTACATCCTCTCATATATTGCTTCTCTAATTCCCCGTTCGAACCAG
CGTTCTTCACGATCTAGGATGTCCGTGGATTCGAAATTGAATGAGTGTCC
CTGGTTGTGTTTTAGATGGTGGTAAATGGCAGAGGAGTAGCGGTTAGCGC
TCTTTCTGCAATGTTCCTTGTACCTTTCTTTTAGTGGTCGACTTGTCTCC
CCAATGTACATGTTATTGCAGTTCGGTTCCTCACATTTCAGTTTGTAGAT
GACATTGGCTTTGATGCCTTTTTCAGGCCTGTCTTTTGGATGGACTAGTT
TCTGCCTGAGAGTTGAGTGAGGTTTGAAGTTAGTGGCAATGTTGAAGTTT
TGGAAGATACGTCTGAGTTTTTCCGATACTCCTTGGACGTAGGGAATGGT
AATGTTGGCCTTGTTTCTGTTGGTCAATGGTCTGCACTTGAGTGTTTTCT
TAGACTGGTCAGAAGGTTTGAGGGCCTTGTTGAAGGTCCAATTTTGGTAG
CCACACTTGGCTAAAGCCACACGGAGATGTCTGTGTTCTTCTGTTTTTGC
TTCGTCTGAGGTAATGACATTGTCTGCTCGATGGAAGAGAGTTTTAATCA
CTGCTAGTTTGTGTTCCAAAGGGTGATGGGAATCAAAGGCCAGATATTGA
TCAGTGTGGGTCGGTTTCCTGTACACTTCGAACTGAAGGTTGCCATCCTT
CTCTATGATGGTTTTGGTGTCTAAGAAGGGGAGCATGTTGTTTTGACACG
ACTCCTGTGTGAACTTGATGTTGTCATCTACCTGGTTAATATGGTCAAAG
AAGTCATCAGCTACTCTCTTCTTTAGCCTACACCAAGTGTCGTCTACATA
GCGAAACCAGTTTGCTGGGGGAGGGCCATTGAAAGTACTGAGGGCTTTGT
TCTCAAACTTCTCCATATACAGGTTCACAACAATGGGCGATACCGGTGAT
CCCATAGCACAGCCGTGCACTTGCTGGAAAAACTGTTGTTTGTAAGTGAA
ATAAGTGCACCCTAGGCAGAGGTCTAGCAGTTCACATATGTGGTCCACGG
AGAGTTTGGTTCTATCTGCAAGTGTGTCGTCGGCCTCCAAGGCTTCCCTA
ACTACTGATACTGCCTCCTTAGGGGGTATGCAAGTGAAAAGCGAGCACAC
ATCATATGAAGTGATGATTTCATCTTCTGCTACAGTGATGTCTTTGATTT
TTTGGACGAAGTCTGCACTATTCTGTACATGGTGTTGAGACTTTCCCACC
AACGGTCCCAAGATCTTAGCCAGATGACCTGCTAGGTTATAAGTGACAGA
TCCTATACCGGATACTATGGGTCGTAGAGGGACACCGGGTTTGTGGATTT
TGGGAAGGCCGTAGAATGCTGGGGGTTGTTCTGTATTGGGATTGAGCTTG
AAATAGGTGGCCTGGTCCAGAAACTTGTCATCTTTCAATTTCTCGAGAGC
TTTATGGATTTCCTTTTTGAACTTGTTTGTGGGGTTCTTTTTCAAGGGCC
TGTATGTGTCTTTGTCCCCTAATAGGTCTTGAACTTTTCCGTCATACTGT
TCTCTGTCTAAGACTACTGTGCATCTGCCCTTGTCCGCGGGAAGGATCAC
TATGTCTTGATTAGTGGCCAAATCCTTGAGCGCAGTTTGTTCTTCCCGGG
TGATGTTGCTAGAAGGGGGTTTAGAGACTTTCAGAGTGGTGGCTACTTTG
GTGCGTAAGGCTTCAGCCTGTTTATATGGTATATGGGCCCGACGAATTGC
TGATTCAGTTTCTGTGATAATGTCAATATTGGGGATCTTGTTAGGCGCTA
CTGCGAAATTTAGCCCTTTGGAAAGTAGGGATTCCTCCGGTTCTGTAAGA
GTGTGACTGCTCAGGTTCTTAACCCACCTCTCGTCTGTTCTACTTGGTGC
TATGATTTTGGGTTTGGAACTGCTAGATCTCCAGTTGGGGTCCTTGTCTG
CTGAACTAAACATTTCCTTCTGTTCCAAACGTTCAAATTTGTTCTTCTGT
CTGACTTTTCCTTTCTCGTGTTGAGAGAGCTGTCCGTGTGTTATGAATTT
CTCAGTTTCTGCAAAGGTCTCTTCTGACAGTTGTTCCCTCAGTACTTGTA
CCAGGTTAGCTTTTTTCGTGTTCAGCCCGTCCAGTTTATAGTTGATCTGT
CTTACCCTCTCGTTTAGTAGCTTTCTTTCGGCGTTGAGAATGATTTTGTT
GGCGTTGAAGCCTCTGACGGAGGTCTTTAGGCGTAAACTGACAGGAGTGA
CACTTACCTTGAGGCACCGCAAACTGAAGCGTAGATGGTTCCGGTAGTCC
GCAATCTTCCTGCTGGTGTTCTCCAGATCCCTCACTGAGCTTAGGCAAAA
CTTACCGTATTGATCTTTGATACGTTGATGAAGGTTAGACATCCAGGTAA
TAAGATACGCCAAAAATAATTACTCAAGCAACTGGATAAGATTTTGAAAC
AGTCAGACGTTTCAGACAGTATCCACTGTCTTTCGTCAGTGACTAACGAT
AGGACTGAGAAC Coding sequence (CDS) from alignment at Sc0000042:396602..403163- >Blg00538.1 ID=Blg00538.1|Name=Blg00538.1|organism=Branchiostoma lanceolatum|type=CDS|length=882bp|location=Sequence derived from alignment at Sc0000042:396602..403163- (Branchiostoma lanceolatum)
ATGTCGTCTCAAATCACGCAGGTGCGGCCGGACGCGGTGATCGGGCACGG
CGGCGCGAGTCTAGAACTCGTCAAAACGTTTGGGGAGGGGGGCAGTGAAG
ATGACCAGTTTAACGCCCCGACCTCGCTCGCTGTCACCGCAGATGGAGAC
ATCGTCGTGGCAGATGGCGGCAACTTACGCCTGCAGTATCTGGACAAAGA
TGGCTCCTTCAAGAAGAAGGTCGATCTGGAGTTCAAGCCGGAAGATGTGG
CGGCACTGACAAACGGTCAGCTGTTGGTGACAGGAGACGGACACGGGAGG
ATTCACGTACTGGACAATGAGGGCGTGGAGTCACGTGTCATCCAGGTGAC
AGGGGCTGCAGAGACATGGGCATCTACACAGGGGGTAGCTGTTGACGGTT
TGGGGCGCATCATCGTCACTATTGGCAACCAGGTTTTCGTACTCAGTCTC
AGCGGTGACGTCATACTGAAGTTCGGGGACGAAGGTCAAGATCAGCAGCA
GTTGGGTCCCGACCTCCTTGTGGCCGCCAACAGCACCAACCAGATCATCG
TCAGCGACTTAAACAACCACAACCTGAAGATATTTGACACCGACGGTCGT
CATCTCTTCACGTGCGGGTCACAAGGCCCCGGACCTGGTCAGCTGGAGAA
CCCCCGGTCTGTCATCACGGACAGCGAGGACAACATCATCGTGGCTGACT
TCTACAACCATCGCGTTTCTCTGTTCAGTCCGGACGGCACGTTTATCAGG
CACGTGGTGATAAAGGAGGAAGAGATCATGTTCAGTATGTTCAATCCAAC
GGGACTGGCAATGACTCCAGACGGGCATTTGGTCGTTTCTGAATTTCGTT
GCATGATTAGTTTCTTTAAGTTAGAAGGATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00538.1-exon-Sc0000042-1570713199:402633..403163 | Blg00538.1-exon-Sc0000042-1570713199:402633..403163 | Branchiostoma lanceolatum | exon |
| Blg00538.1-exon-Sc0000042-1570713199:396602..400497 | Blg00538.1-exon-Sc0000042-1570713199:396602..400497 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:396602..403163 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00538 |
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