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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1079163..1085128- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00537.0 ID=Blg00537.0|Name=Blg00537.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5966bp|location=Sequence derived from alignment at Sc0000042:1079163..1085128- (Branchiostoma lanceolatum)
ATGGCCGGGTGTTATCGTACCTCCCGAGCTGTCCGTACTTTTGTCGCCTT
CACAGCGGTGATCCTGCTTCTTACAGATGGATCAGGTGAGGTTGGTTTTA
CTTTTCCTTTTTCTGCACACAAATTTACTTATTAGTCTTTACACGCGAGG
AAAAATCAGTCCCGACGATATCAGTCATATTTTTTAAAACTTTGTGACGT
GTTCCCGAGAACTAGGTTCATCAACCTTACACGTCCACTTACATGACTTG
AAAAACACTAATTATTCAAAAAGCCATCATTTCTTCTAGTCCAATTTAGA
AGTTTAAGACAGCAAGGACAAAGGTCAGATGTTGCGTAACTTCACTGCAC
AGTAACCTCTGACACAGTTTTCCGCTAGCAAGGTTGCGAAAATATGTGAT
GAAAACAAAAATTGAAATCACTGTGTTACTTTTCTAACGTTAGTAGGAAA
CATGATTTGTTGATAAATAGTCTTAGATTCGAATCAATTACCCGAGAGTC
CGTTTTGAAAAGAAATGAGACCTTATTGACATTTGTTCCAGACGCCGCTG
TTGTGTCCACCACCCATGGCGACGTGAGCGGTTCTGAGTTCCTGACCGCC
TCTGTTGTCGGAAATGCCGTCTTTGACCGCGTCTTCACCTTCAAGGGGAT
TCCTTACGCCGCTCCGCCTGTGGGGGACCTCAGGTAGGTGTCAGGTCAAA
AAAAGGAAAGAACAAATGGTCAACTGAATACGCAGTGATTGCATAGTCGG
TTTGAAGACTATATGATACCAATTTGATAATCAACAAGTAAATGATGGTT
CGTGCGAACTCTCCTCCATATGATATCTCACCTACATTTTCCGAGAAAAT
AGTTTTCACGGGCCTTATATATGCTACAAGTAGGCCCAGTGTACGCCAGC
GTGTAATAGTGACCTTTGCCCTGAACATCCCTCCTGTCCGTCGCTAGGTG
GCGCCCTCCCCAGGACCCAGGCCGCTGGACAGGTGTCCGTGACGTCACAG
AGTTCGGGTCCAGATGCCCACAGGACGAGTTCGCGCTACCTCATCCGCTC
TACGACGAGGTACTGGGGTCCCGCAGTAACACCAGCAGCAGCGAGGACTG
TCTGTTCCTGAACGTGTTCACTCCAAACGTCTCCGCCACTGCCAACCTGC
CTGTGAGATAGCCCTACCTTTGATATAGTGACTAAAGTATGCCTTAACCC
GACCTAGACCGGTCCCTGGGACGAGGGTGGTGGTGGCTCATTCGCCCCCC
CCCTCATAACTACCAAACAGTATGATGTATTATCACCAACTTTGCAGGGG
GTGATGTAAATGTAAAGACTAATCACTCCTTTAATTATTTTATCCTTATG
ACGTAATATGACGTAATAATGACGTCATTGATGTTATGTTATGGGCTAAA
ACCGTCAAAATAGGGAATTCCCGTTTTACCTAAAGTTATTGACCAATAAC
AACATAAAAACAAACATATACTAGTGCTTTAAAATCCTGGTATTATATAA
AACTGAGAAGTCATAATGAACATCAAAGCTTTTGACCGCTTGGTCAAGCA
TTTAAAAGTCGTACTATATCAGGTATGGAAGAGTTCTTAAGTATGTCTCT
TCTGCATTTGATGGTTGCTCTTTTCATAAGGTGTTTTGCTAGCCCAGATG
GCCTTCAATACTAATATTTACCTTCTGTTAAGGTGATGGTGTGGATCCAT
GGCGGGGGTTGGTACCTTGGTAGTGGCGAAACCTACCCAGCAGAGATCCC
CACGTCACTCCATAACGTCGTCATGGTAACCATCAACTATCGTCTGGGCA
ACCTGGGCTTCCTGCCGACCGGAGACGACGACGCACCGGGCAACTTTGGT
CTTCTGGACGCGGTGAGTTTATTTCCTCCCAAAAAGTTTATTTGAGTTTT
ATCCCTTCATCGCTTCACACAAAGAATGTGAGTTATTGTTTTTGTCTGTC
TGTTTGTCTGTCTGTCTGTATTTCCGGGATTCCGAATATACACAATGCAG
TCTTGTCATACACCCCTAATCTTAAATTTGAACACAAAATATAGTTGTTT
CAGTCAGCTATCACTCTTGACTGATGAACCCAACATTATCCTACCTCAGA
TAAAGGCCCTGGAGTGGGTACGAAGCAACATCCGGAACTTCGGAGGAGAT
CCCGACAGAGTCACCATATTTGGGGAGTCAGCTGGAGGCTGGGCCGTCTC
CCTGCTCGTCATGTCTCCCATGGCAACGGGACTGTTCCACCGGGCCATCT
CTCAGAGCGGCGTGGCGGGAGTTCCTGTCACCCAGAAAGGTGACCTCACA
CAAACGGAAATTCTCGCTCGCGAGTTGAACTGCAGCACGGCCTCCTACGA
TGACATGATGAGCTGTCTGCGGGGGTATGTTCATTGTGGTATTCCATCTT
TAATCTAGTTTTTTTTTAGTCGACTTGGAGAGTTGTTGCAGAGTGTCCAG
ACCGCTACAGCAGCACAACACAGTCGACTACCAAGTCCATATATATATAT
AATCACCTAGAAGTTAAAGTTTCAGATGATTCTACATTTGTGCGTCATAA
AAAGCAGTTTTTATTCGAAAACGTCTGCACTATATAACGTAACTAGCGTT
TAAGGTCGTGCTATTCTAACTAAATATTTTGTTCAATCAACTTAAAAATG
AATTTGGCCTTGGCAGGTTACCGAGTGAGGACTTCACGACGCCGGTGTTA
TCGTCCGTGGTCATCGATGGCAGATTCCTCTCGCAAAGTCCTTGGGTAGG
AATGATCCTTTATTGTGCCAGGCAGATATATAATGTGTCAATCTAAGTTG
ATTATAAAGGTACAGATTGCTAAGCGCATCCGCTGGACATGTGCCAATGA
TTATGTTGTTCGTGTCGTTAATTGCATTGCCGCGTTGGCATTGATGATGG
GAGGCGGAAGTCGGCATCGACCTCCGTGCGCTTTTCATTCACCTCTCAAA
ATATCTCGACGTTGTCTGATTAGACGTCGTGTCTTATGCATTATGCATTT
AATCTTTTTCAACCACGCTATGGAGCAATATTTTTATAACAATCTGTATT
GTGTGTTTTATCGCAGGACCTGATGAACCACAAGTTCATCAACAGGGTGG
ACTACCTCCTGGGTACCAACAACGACGAGTTTGGGTACCAACTAGCGTCT
GAGTTTCCCTACGTTGATGCAGACGGGATGACCAGGGCAGAGTTCGAAAC
TTACCTGCTCAACAATCTACAACAGATAGCCCGCCAGTACCTTGTAAGTG
ACTATTGGACTGCATACATGAAAAATTTGATATTTTGCTTATTTCCAAAA
CATTTAGTGCTCAGCGAATACCTTTCGTTCCCGCAATCTGCCTGACCGGG
CCCCGGTTTGGAAATGAGCAGAGTTATGACACGCTTGACCGTGTTTTGAA
ACTCTTTTGCCTGTGTTATTCCTTAGGGCGGTAGTGGGAGTGCGATTCTC
CAGCCTGTGTTGGACTACGTATACCTGGACCCCGTCATGGCGGACGATCC
GATCTACCTGCGCAACCAGTTCCTCAACATCCTGATGGACGCCTGGTTCA
CCGCACCGACAGTCATGATGGCTAAGGCCGAGTCAGGCATGCCGGCAGTG
GCATGGGAGGGTAAGGAAGTCTCGTATTTGTGTGGTACTATCATAGGAGG
TACGCCTCGGAATTTTCGTTCAATCGCCTGTGCTGAACTGCCCGGGTTGG
TGTCCAAGTTAGTTCAGTCCGAGCATGACCCGAAATGAAGTACTCGGGGA
TCACCCGAGCGGTAGCCGAAGGAACCCGAGCGGTAGCCGAAGGAACCCGA
GCGGTAGCCGGCGATTCGGGCGTTTCCGGAGCGCGCAGCGGGTGGTTAGG
GCCCTGTCACACTTGTGCGTATATCCAAGCGCGTATGAGTTGCGCATTAA
CATGTCTTTGGTTTGAGTATATATAGTTTGAGGGGAAGAAGCTGTTTCTC
ACTTTGACCTACCGTGCAGCCTGCTTATCAAACCAAAGGAATTACTTCTT
CGGCTGCAAACTTAACCTAAACCAAAAACATGTTTATACGCAACTCATGC
AGACTTGTATACACGCACAAGTGTGACAGGGGCTTTAGATCCCTTGCTCA
ACGACAATCCCGAGGCCTATATTGGCCAGGGTACTATCACTACCAATGGG
TACAAGGCAAAATTGACTCTCGTATTTGGGACACTAATGGGGAAGGCTTG
GTGCTGTTCGAATGCTGAGAAAGTATTGTGTTGGAATATCACACTGCTTC
AGTTACAGATTCTTTTGATTCTGTTGTTTTGTCTCACGAGCTGTCAACGG
GCTGTCATTTATTGTTCATATCAAAGGACGAGAATTATCGATACATTATC
GTTAAGCGTATAGTAAGAAGTGGTTGTAAACCTATCTATTCTACTGCTTG
TTGCAGCAGGCGATATCACAGTCTTAGACATGTAAACATCCTACTGTCTA
ATTGTTTCTCTACGTAGCCCCCCGCAGCCGAGTTTACCAGTACGAGCTGC
AGCACAGCGCCTCGGTTTTCTCCTTCCGCCCGCCGTATGTAGGAGTTGAC
CACGGTGATGACCTCTTCCTCGTTTTCGGGATCCCTCTCTTGCGCGATGA
GAAGGGTTCGTACTGGAAGTACAGCTTCACCCAGGAGGAGAGAGACCTGA
GTCTGGACATGATGGCGTACTGGGTCAACTTCGCCACTAACGGGTGGGTA
GATTTATCTTTTATGTCCCTGCCAGTGGGGTCGTGTGGCGCAATGGCAGA
GCGTTCGACTCAGAACCAAGAGGTCCCGAGTTCGAATCCTGTCATGTCCC
CGACGTTGTGCCTTTGGGAAAGGCACTTTACACGACTTTCCTCACTCCAC
CCAGGTGTTAATGGGTACCTGACTTCGGTTGGGGGAGGTCGTATTGAGGT
CACCTGGTGGCGCCGAATGGCAAAATGCAAGTGTGGATAAGATATTATAT
GTTGTGTATTGTGTGAAACCTGTAAAACCCTGTATGAGTTAAGCACTAGA
AAGGCTGCCATTGCGGGTAATTTCTGACCAATTTTAAAAAAAAACCACAG
CGCATGAAAATCTATCGACCGACGAGTCTGTGAGCTTAAAATGACATTTT
CAAGAGTATTAGCCCCAGTGTTCTCTCGATCATCGCGCGACTTTCAGAGA
TTGGCCAATGTTCCCCAGCCCTGTACAATGGTATTGGGCAGATGCTCAGG
TTGAACATACACTCGAGGCTCTGGTGATTTTTTTTACTTAAGGTGCCCTC
CTAGTGATCAACGAATACGACCGATGACCGTAGACGGTGTGGCAGGTTAA
TCTCCAAGCAGATCTATAGGTTGCGAAGACCGTATCAAACTGGCAGAAGA
AGTATGTTTTGCAACCTTGGATTGCTATACAAGCTCCTTCTTCCAGTTGG
ATACGGTCTTTGCAATCCATTGGGCCTGCTTTGAGGCTAGTGGCAGGTCT
TAATGGTGGGGTGAGAGTCAACTCAATGAAAAGGGTACTTAATTTTAGAT
ATAAAAGATACCTGTTGACAAAGGCACCAGCAGAAGTCAATGATAACCGT
GCATTATTTTAGTATAGAATGAAAAATGCTATGATACTCATTCTTTCATT
CAAATAGGTGCTAAATTAAATCTTATTCACTCGCTCTTTTTTTGTTTATT
TGTTTCTCTCACTCTCTCTGCTTGTTACAGAGACCCCAACGACTCCACAG
GAGCGGCGCGCATGCGTAACATGGTCCACTGGCCTCGTTACACTTCTTCA
GCCCAGTCCTATCTGAAGCTGGACGTGACGTCATCTGCTGACGTCAAACT
GAGGGAGTCCCGGATGAAGTTTTGGAACGAGGAGGTGCCGAGGCTTCTGG
GAATGCACGTCCACAACCACCGCGCCAGGGCTGGCTTCAACGCTGGGACT
CAGGGGGCTTCACGTAGCCTTTCTGTCCTGGCGTTTATGTTGATTATGTC
CTATCTGTTGGCTTAA Coding sequence (CDS) from alignment at Sc0000042:1079163..1085128- >Blg00537.0 ID=Blg00537.0|Name=Blg00537.0|organism=Branchiostoma lanceolatum|type=CDS|length=1839bp|location=Sequence derived from alignment at Sc0000042:1079163..1085128- (Branchiostoma lanceolatum)
ATGGCCGGGTGTTATCGTACCTCCCGAGCTGTCCGTACTTTTGTCGCCTT
CACAGCGGTGATCCTGCTTCTTACAGATGGATCAGACGCCGCTGTTGTGT
CCACCACCCATGGCGACGTGAGCGGTTCTGAGTTCCTGACCGCCTCTGTT
GTCGGAAATGCCGTCTTTGACCGCGTCTTCACCTTCAAGGGGATTCCTTA
CGCCGCTCCGCCTGTGGGGGACCTCAGGTGGCGCCCTCCCCAGGACCCAG
GCCGCTGGACAGGTGTCCGTGACGTCACAGAGTTCGGGTCCAGATGCCCA
CAGGACGAGTTCGCGCTACCTCATCCGCTCTACGACGAGGTACTGGGGTC
CCGCAGTAACACCAGCAGCAGCGAGGACTGTCTGTTCCTGAACGTGTTCA
CTCCAAACGTCTCCGCCACTGCCAACCTGCCTGTGATGGTGTGGATCCAT
GGCGGGGGTTGGTACCTTGGTAGTGGCGAAACCTACCCAGCAGAGATCCC
CACGTCACTCCATAACGTCGTCATGGTAACCATCAACTATCGTCTGGGCA
ACCTGGGCTTCCTGCCGACCGGAGACGACGACGCACCGGGCAACTTTGGT
CTTCTGGACGCGATAAAGGCCCTGGAGTGGGTACGAAGCAACATCCGGAA
CTTCGGAGGAGATCCCGACAGAGTCACCATATTTGGGGAGTCAGCTGGAG
GCTGGGCCGTCTCCCTGCTCGTCATGTCTCCCATGGCAACGGGACTGTTC
CACCGGGCCATCTCTCAGAGCGGCGTGGCGGGAGTTCCTGTCACCCAGAA
AGGTGACCTCACACAAACGGAAATTCTCGCTCGCGAGTTGAACTGCAGCA
CGGCCTCCTACGATGACATGATGAGCTGTCTGCGGGGGTTACCGAGTGAG
GACTTCACGACGCCGGTGTTATCGTCCGTGGTCATCGATGGCAGATTCCT
CTCGCAAAGTCCTTGGGACCTGATGAACCACAAGTTCATCAACAGGGTGG
ACTACCTCCTGGGTACCAACAACGACGAGTTTGGGTACCAACTAGCGTCT
GAGTTTCCCTACGTTGATGCAGACGGGATGACCAGGGCAGAGTTCGAAAC
TTACCTGCTCAACAATCTACAACAGATAGCCCGCCAGTACCTTGGCGGTA
GTGGGAGTGCGATTCTCCAGCCTGTGTTGGACTACGTATACCTGGACCCC
GTCATGGCGGACGATCCGATCTACCTGCGCAACCAGTTCCTCAACATCCT
GATGGACGCCTGGTTCACCGCACCGACAGTCATGATGGCTAAGGCCGAGT
CAGGCATGCCGGCAGTGGCATGGGAGGCCCCCCGCAGCCGAGTTTACCAG
TACGAGCTGCAGCACAGCGCCTCGGTTTTCTCCTTCCGCCCGCCGTATGT
AGGAGTTGACCACGGTGATGACCTCTTCCTCGTTTTCGGGATCCCTCTCT
TGCGCGATGAGAAGGGTTCGTACTGGAAGTACAGCTTCACCCAGGAGGAG
AGAGACCTGAGTCTGGACATGATGGCGTACTGGGTCAACTTCGCCACTAA
CGGAGACCCCAACGACTCCACAGGAGCGGCGCGCATGCGTAACATGGTCC
ACTGGCCTCGTTACACTTCTTCAGCCCAGTCCTATCTGAAGCTGGACGTG
ACGTCATCTGCTGACGTCAAACTGAGGGAGTCCCGGATGAAGTTTTGGAA
CGAGGAGGTGCCGAGGCTTCTGGGAATGCACGTCCACAACCACCGCGCCA
GGGCTGGCTTCAACGCTGGGACTCAGGGGGCTTCACGTAGCCTTTCTGTC
CTGGCGTTTATGTTGATTATGTCCTATCTGTTGGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00537.0-exon-Sc0000042-1570713199:1085044..1085128 | Blg00537.0-exon-Sc0000042-1570713199:1085044..1085128 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1084446..1084587 | Blg00537.0-exon-Sc0000042-1570713199:1084446..1084587 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1083977..1084181 | Blg00537.0-exon-Sc0000042-1570713199:1083977..1084181 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1083267..1083446 | Blg00537.0-exon-Sc0000042-1570713199:1083267..1083446 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1082755..1083029 | Blg00537.0-exon-Sc0000042-1570713199:1082755..1083029 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1082384..1082462 | Blg00537.0-exon-Sc0000042-1570713199:1082384..1082462 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1081886..1082062 | Blg00537.0-exon-Sc0000042-1570713199:1081886..1082062 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1081519..1081702 | Blg00537.0-exon-Sc0000042-1570713199:1081519..1081702 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1080436..1080661 | Blg00537.0-exon-Sc0000042-1570713199:1080436..1080661 | Branchiostoma lanceolatum | exon |
| Blg00537.0-exon-Sc0000042-1570713199:1079163..1079448 | Blg00537.0-exon-Sc0000042-1570713199:1079163..1079448 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1079163..1085128 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00537 |
|
