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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:602566..608521- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00531.0 ID=Blg00531.0|Name=Blg00531.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5956bp|location=Sequence derived from alignment at Sc0000042:602566..608521- (Branchiostoma lanceolatum)
ATGCGGTCAAGTTTAACCAGTGGAAGACTAAGCACGTTGGAGCTGATAAC
CCCCAAAGATGTCTACAAATTAGGAGATGACGTCGTTGTTACGGTGAAGA
CTAGAAATCAGCTGAACAGACCGAAAAGACGAGGAGGGGACTATCTCAAA
GCTCGGATGTTCACCGACGATGTTGCCGCAAGTACTCCCGGTACGTGTGT
TAAACACATTTGTTATTCCAAGGTACCAAAAGGGGAGCCAGCCCCAAGGC
AGTTGAGTATTATTTCTACTTAGTCGCGCGCGCTGTCTGTCTGTCTGTCT
GTCTGTCTGTCTGTCTGTCTGTGCGTTTCTGCGTTACCTATATACACAAT
GCAGCATTACCATCCTCAATGGTCTGTAGGAATCAAAGGTTTGGACAGCA
GTGTAGGTAAGGGGTCGAGGCCTGCTATAACTCACTGCCTTATTTAGATC
GTGCTCCATGACTTTTCACCTCATATACTGCTTGTTTCATTTGTTCGGCA
GGTATCATCACGGACCACGCTAACGGCACGTACACGGTGCGGTTCCGGGC
GGGCTGGAGCGGGAGGGCCGCCGTGCAGGTGCACGTCATCCACCCGAGGG
AGGCTATCGACGTGCTGCGCAGGCTCAGGAATGTGGAGAGGAAGCGAGTG
AACGTCTGCGGCTTCTCACACGGTATGGGTAGCGTTCGTAGTACACCGTT
GCCTTCTAGCAGAAATATGGCATTGTAGATTGAACTAGCTGTAACCGTTC
AAACTGTCTCCTGTCTTAACACAAGTTTGAGCAAAAGGTTTTCATCAAAA
AAACATCTTCTAAATTGTCCAATTGTTCTTTTTCTTAAGGTAAACTCTCC
TGATAAAACTTGCTTCCCTTGTAAATTAATACATCGATATTAGCAAAATG
TCGAACATCTTACACGTGTAATGCCTACCATATATGTGCATGTGCCATAC
TGTAGCTGAGGAACTGCTACAGTATGATACATCATACATGTATACATACA
TGACCAAATTGTATTGTATTACTGTATTATTCATTCAGCCAGAAGAAGGG
TCTGGTGAAGACCAAAGTAGCAAACCTGGTACAGTAGAATCCGCTTAACA
ATGCAGTGAATGGGAACCGGTTTGGGATTTTGGGATTTGGTGCAATTAAA
TGGAATGTGCGTTTATCCGGGGTGCAATTAAGTGGCTACGTCTGTACATC
GACAGTATTGCTTGATGCTTGGCGCGTTATTTGAACCCTGACGATAAGTA
CAGCCGTAGTTTTCCTACCTTTCCACGCGCGGTGCAGACGGTGGCACGGA
GTGGACCCGCTGCTGGACAACACCGTCCAGGGACCCAGCTGAGGAGGAGT
GCGACTTCTCGCACGCCACCAGCGGAACTGATTGGTACTGCAAGAAGCCG
GCCAGGGCGCCCTGCTCGGCGATAGACGGGTGCAGTGGTGGAGGGCTGCG
GCCGCTAGAGGAGATAGGCGTGACGGAGACAGACAAGATGCTGTTTAATG
AGTATGTTTTTTTTTTACTGTCGCTTTGTCTTTGCTACTTTGTATCAAAC
ATTTCAAAACGTTCGTTGAGCTTTTGCTACTTTCTATCATACATCTCAGT
GCAACGCTTCCTGGGGAGAACATCATGCTTGGACGTTAGAAATTCGTTGT
TGAATACTAGATTTGCTTAAGACTGTCTATGAATGTCATATGTATCTTAA
CACTATTGGATGAGCGATGTATCATGAAAAATTACAAAATCCGTCCCGAT
CATCATTGTTCATAGCCATAGGAAAGCTGCACAGCACCATCTTCGCAAAA
CGGGGAAACTGTCACAGAATAGATTTGCTAATGAATAGTTGAATAATCCC
ACTTACTCTACATTTGTTGTGCAGATCGTTCGTTGATCAGGAGGTTATGC
AGGGGACGACTCTCTCAGTGCAGGTCACGGAGCAAGACGTTCCTTGTAAG
TATCTACAGTGGCGGCAAAGTAGCACAATACATGTTGATTTACACTCTGA
AATAAAGTTGAACGGTAATTTCAAACACACAAAAAATGAACTTATCCAAA
TTTTAGTCTGATCGACTCCAGTCTTTGTCAAGGAATGAGTATTGCACTGC
TTCTGCGACATCACGTTATGCAGATAGAACACGCGACTCGGTGAGCAGTG
GGTCATACATTGCAGAAAGCTTATGGCGCGCCCCGTCTCAGTTTAGAAAT
GGTTGTAAGGCCCGGATTAAAGGGCCTATTTCAGCACTCTTGTTTTACAT
GTAGTTGTCTGGTCATCTATGCATCCATATTTGCAGTCTTAAACTGCTAA
CCACTGCCAACTTATAAGTTCTGATATCCTAACACTATGCTAGTCACAGC
TTGTTACTTGACGTGTTGAATATGTAACAATCCCTTACAGGCGTCATTCG
GCACGGCGGCGGAAACTGCCTTTACGTGTCGGACCCGGATGTGGACGGCA
GCGCCCCCTTGCGGCGCAGAGTGGTACTGTGGCCCTGCACAGACAGCGTC
AGACAGGTGTTCGTAATGAGGCATGACGGGAAGATAGTTCATCCTGACAG
CGGCCTCTGTGTCGGTGTGATAAACGATAATTCAACTGACAATGGCCTGG
TGGTTCTTAGGTAACCGTAGTGCCTACAACAGTCTGTACCACACTCGTTA
ATGGATTAAAATGCATGGTAGAAATTTATCCAAACAGGGAATGATATTAC
TTAGGCAAATCCAGTCACTACTAGACACCACTTAAAACCGACTGAAGATT
AGAAATTTGTCAAAAAATTGCCAAATGAGCTATCCTTTTAGAGACATCTA
ATGTGCTCCACAGAGTTCAAAGGTAATCATAGACCTAACTGCAAAAGAAG
TAGAAATTCGTCAAAATGTGGAATGATTTGGCATACGAATTCGAATTTAC
GAAGATCCAGTTCGGAAATACGCCTAAGTCCTATTTTGACCAATACGTCT
AGCCATAATAATAGTCTAGTGGAGACCAAAGAAGCAAATCATATTGATGT
ATAGTTTAAGGTTTTCGACTTTATACGTAGGTTTGCCATGCAACCCTTTC
GTATTTCTTAGCATTGCTACAACTGATATGCCGTTCCTCAGGGAGTGTGA
GTCGGGCGGACTGCGGTTCCGACAGACGGAGAGTCGCGCCATCCAGGACG
TAACGACGCTCAGGTGTCTCCATCCTCACCTGGACGTACAGGTGCCTCTG
GACGGGTCACCTGTCCGTCTTGTCCAGGGATGTGATGACGCTAAGGTCGT
CTTCGAATTCATGGAAGGTGATTTTTGTGAGTTACTTGTGAGCGATAGAT
ATCGGACACAAAGCTTCATGTTACAGTACTGTAGGAGTGTAAATGAAATA
CATCGCACCGCCAAAAGCTCAATCTTTTTTGCAATGTATTCTCATCTTTG
GTACGTTCAACAAAAAATCATTAGTTTTGTGTGCACAACTTCAATTTTGT
GTGGTTTGATCTCTCTTCTTTGTGTAAACGGCTACTGTGTTACTGAGACT
ACCTAAATGATTATACTACCTAGTAAGTGTTCACAAAATGTGTTGCACTT
TCTTCACAGATTTGTCTAGCTTACCGAAGTGTACACCAGGCCGAACGCCC
TCTGCCGGCTTCTATCTGCACGACAAGTGGTACCCATACGCCTGCCGCGC
GAGGCAGTTTCCCGACCGAGACTCCGTCACCAAGTGCCTGACGAACAAGT
CTGTGTACATGTATGGGGTAAGCTGGTAATTTACAGCCCTTTTTCACAGC
AAGGCACCAACAAAATGTTATGTGATAAGATGATAGTCGCCTATTGGGTC
ATTCCATCCACAAATGTGGTAAATCTCAATAAATGAATAAGTAAACATAT
TCTACAACATCTGTGGCAGTAGATTTTGTGAGAAGTTATAAATGCGATCG
GGCAAAGACAACATATGAGTGGTGGATGGGCGAAATCTCAGGGTCGGGGG
TTCAAGTGCATACGATTTGATATCAAGATCCTAATAGTCAACAAGTTATA
AAAAATCACTTCAAAACGTTGCATTTCCATCTTGATGCTATTCGTTGTCT
TATGCACGTCCTATGCCAGGACTCGACAGTTCGGCAGTGGTTTGACCACC
TGACCAGCTACCTGGGACTGACCCGTGTGATGCTGCTGCCCGGCATGGAG
AACTGCTACATCGGTCCGTGCGCCTCGCACCGCAACAGCACCAACACACA
TCTGCACATGATGTTCCACAACTTCCCCATCTACGGAAACCCTTTCAAGT
CAGTTGGTGCAGTGTTCTTTATATGATCTGTATCTGTGTCCGTATCGGTA
TAGCCCGTGTAACCTCCCTGGGTGTAACTGACCAGCTTCGAATGTAGTTT
CCTTGTGTCAGCCTCCTCTAGTAGGCTGGACTCCCTCTGGAGGTGGGTGC
CTTGTCTACGAATTCAACTTCGTAGATATGATGCGGTGTTTTTTTCCCTA
TCTGGGCTGTTCCGTGTTTCGTCGCTTCCATGGTAAATATTACTAGTATC
TCCGGCTTTGGGGTCCACAGAATCAAGGAGGCGGCTGCTTCAATGTACTA
CAATAAAAGGTAGATGGCAAAATATCCAGAATCAAGTTTCGGAGTACAAT
ACACCTCTCAGTTTTAACTCTTTACAATTCGCATGGCAGAATATGGGATA
AGCGGTCTACGAAAGGATGCTCTTTAATCAGTCAATCTTTCCTTTTAAGT
CCGTCTTTTCAAAGACTACAAGACCTTTTGATATTATTTGATCACCGCAG
GTACCACCGTATGATCTACATCGCTGATGAGCTGGACCGGCTGCAGGGCG
GACCGGATGTCGTAGTCGTCATCACCATCTGGTTTCACTTCCTCATGGAG
CCGGTTCACATCTACCGGAAACGCATCGTAGCCATCCGCGATGCCATTCT
AAGACTCCATCAGGTAAGATACATTTAACCGTGTTTTTTTGGGGGAAAAA
GAATACTCCATGGTTTGGGCTTGTCAGTCTAAGTGTGCTTCTTCACTGCA
GTTTCTGTATGCTCTGCCAGAGGGCGAGGTGCAGTTTCCGTATGTTCTGC
CAGAGGGCGAGCTGCAGTTTCCGCATGTTTTGCAAGAGGGCGAGGTGCAG
TTTCCATGTGTTCTGCAAGAGGGCGAGGTGCAGTTTCCATGTGTTCTGCA
AGAGGGCGAAGTGCAGTTTTCGTACGGGGGAGTGAAGTCAGCTATCTCTA
ATTTTCTTGTTTTTTTCATGTTTCCCCTGCAGCGACAGCCGGAAACCCTA
GTGTTGATCAAGTCCGGCAACATGGCGTTCAGCTCTCTGTGGGCGCCGAC
GCACGTGGGCAACTACGTCATGGCGGACGACTGGATGTCCCAGGACCTGG
ACAGGGTCCAGCGGGAGGTGTTCTCCCCCACCCGTGCCGTGTTCCTGGAC
GTCTGGGGCATGACGGCGTGTCACCGCGTCAAGCACGACATCCACCCTCC
AGGCGTCATCGTCGCCGCGGAAGTTCGACTCATGTTAGCCTTCATATGCC
CTACGTAACGTAACGTAACGTGACGTGACGTGACGTGACGTGGGGGCATG
ACGGCATGCCACCGCGTCAAGCACGACATCCACCCTCCCGGCGTCATCGT
CGCCGCGGAAGTTCGACTCATGTTAGCCTACATATGCCCTACGTAACGTA
ACGTAACGTAACGTGACGTGACGTGTGGGGCATGACGGCGTGCCACCGCG
TCAAGCACGACATCCACCCTCCAGGCGTCATCGTCGCGGCTGAAGTTCGA
CTCATGCTAGCCTACATATGCCCTACGTGACGTAACGTAACGTAACTTTA
ATGCAATGGTGTTTGGTTTTATGCAATGTACACTTAGACAGGGAAACTGC
CGGTGCAATGGCCTAGTGGGCAGAGTGTTCGCCATGCACACGGTGGGGTC
ATACCAAAGACTCTAAAAATGGTACATACTGCTTTCTCTGCTTAGCACTC
AGCATT Coding sequence (CDS) from alignment at Sc0000042:602566..608521- >Blg00531.0 ID=Blg00531.0|Name=Blg00531.0|organism=Branchiostoma lanceolatum|type=CDS|length=1818bp|location=Sequence derived from alignment at Sc0000042:602566..608521- (Branchiostoma lanceolatum)
ATGCGGTCAAGTTTAACCAGTGGAAGACTAAGCACGTTGGAGCTGATAAC
CCCCAAAGATGTCTACAAATTAGGAGATGACGTCGTTGTTACGGTGAAGA
CTAGAAATCAGCTGAACAGACCGAAAAGACGAGGAGGGGACTATCTCAAA
GCTCGGATGTTCACCGACGATGTTGCCGCAAGTACTCCCGGTATCATCAC
GGACCACGCTAACGGCACGTACACGGTGCGGTTCCGGGCGGGCTGGAGCG
GGAGGGCCGCCGTGCAGGTGCACGTCATCCACCCGAGGGAGGCTATCGAC
GTGCTGCGCAGGCTCAGGAATGTGGAGAGGAAGCGAGTGAACGTCTGCGG
CTTCTCACACGACGGTGGCACGGAGTGGACCCGCTGCTGGACAACACCGT
CCAGGGACCCAGCTGAGGAGGAGTGCGACTTCTCGCACGCCACCAGCGGA
ACTGATTGGTACTGCAAGAAGCCGGCCAGGGCGCCCTGCTCGGCGATAGA
CGGGTGCAGTGGTGGAGGGCTGCGGCCGCTAGAGGAGATAGGCGTGACGG
AGACAGACAAGATGCTGTTTAATGAATCGTTCGTTGATCAGGAGGTTATG
CAGGGGACGACTCTCTCAGTGCAGGTCACGGAGCAAGACGTTCCTTGCGT
CATTCGGCACGGCGGCGGAAACTGCCTTTACGTGTCGGACCCGGATGTGG
ACGGCAGCGCCCCCTTGCGGCGCAGAGTGGTACTGTGGCCCTGCACAGAC
AGCGTCAGACAGGTGTTCGTAATGAGGCATGACGGGAAGATAGTTCATCC
TGACAGCGGCCTCTGTGTCGGTGTGATAAACGATAATTCAACTGACAATG
GCCTGGTGGTTCTTAGGGAGTGTGAGTCGGGCGGACTGCGGTTCCGACAG
ACGGAGAGTCGCGCCATCCAGGACGTAACGACGCTCAGGTGTCTCCATCC
TCACCTGGACGTACAGGTGCCTCTGGACGGGTCACCTGTCCGTCTTGTCC
AGGGATGTGATGACGCTAAGGTCGTCTTCGAATTCATGGAAGATTTGTCT
AGCTTACCGAAGTGTACACCAGGCCGAACGCCCTCTGCCGGCTTCTATCT
GCACGACAAGTGGTACCCATACGCCTGCCGCGCGAGGCAGTTTCCCGACC
GAGACTCCGTCACCAAGTGCCTGACGAACAAGTCTGTGTACATGTATGGG
GACTCGACAGTTCGGCAGTGGTTTGACCACCTGACCAGCTACCTGGGACT
GACCCGTGTGATGCTGCTGCCCGGCATGGAGAACTGCTACATCGGTCCGT
GCGCCTCGCACCGCAACAGCACCAACACACATCTGCACATGATGTTCCAC
AACTTCCCCATCTACGGAAACCCTTTCAAGTACCACCGTATGATCTACAT
CGCTGATGAGCTGGACCGGCTGCAGGGCGGACCGGATGTCGTAGTCGTCA
TCACCATCTGGTTTCACTTCCTCATGGAGCCGGTTCACATCTACCGGAAA
CGCATCGTAGCCATCCGCGATGCCATTCTAAGACTCCATCAGCGACAGCC
GGAAACCCTAGTGTTGATCAAGTCCGGCAACATGGCGTTCAGCTCTCTGT
GGGCGCCGACGCACGTGGGCAACTACGTCATGGCGGACGACTGGATGTCC
CAGGACCTGGACAGGGTCCAGCGGGAGGTGTTCTCCCCCACCCGTGCCGT
GTTCCTGGACGTCTGGGGCATGACGGCGTGTCACCGCGTCAAGCACGACA
TCCACCCTCCAGGCGTCATCGTCGCCGCGGAAGTTCGACTCATGTTAGCC
TTCATATGCCCTACGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00531.0-exon-Sc0000042-1570713199:608332..608521 | Blg00531.0-exon-Sc0000042-1570713199:608332..608521 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:607850..608020 | Blg00531.0-exon-Sc0000042-1570713199:607850..608020 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:607021..607234 | Blg00531.0-exon-Sc0000042-1570713199:607021..607234 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:606577..606647 | Blg00531.0-exon-Sc0000042-1570713199:606577..606647 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:605912..606131 | Blg00531.0-exon-Sc0000042-1570713199:605912..606131 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:605255..605430 | Blg00531.0-exon-Sc0000042-1570713199:605255..605430 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:604805..604962 | Blg00531.0-exon-Sc0000042-1570713199:604805..604962 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:604274..604452 | Blg00531.0-exon-Sc0000042-1570713199:604274..604452 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:603609..603771 | Blg00531.0-exon-Sc0000042-1570713199:603609..603771 | Branchiostoma lanceolatum | exon |
| Blg00531.0-exon-Sc0000042-1570713199:602566..603289 | Blg00531.0-exon-Sc0000042-1570713199:602566..603289 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:602566..608521 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00531 |
|
