Blg00527.0 (mRNA) - B. lanceolatum

Overview
NameBlg00527.0
Unique NameBlg00527.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000042:863766..865355-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00527.0 ID=Blg00527.0|Name=Blg00527.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1590bp|location=Sequence derived from alignment at Sc0000042:863766..865355- (Branchiostoma lanceolatum)
ATGGGAGGGCCGCCAGAAATCAGGAGAAGTCAGGAAAAGGTCAAGATCGT
CCTCCTTTGATCTGCTTAAATGGAAATACAAAAGATAACCTTTCACATAT
TTCTACTTTTGTCGTTGTGAATATCTCTAAATGTTACTAAGGGCTAAGAT
TTTATGATAGCTATAAAATGACATGAAAGTTCGTTTGTGTTGGTACATAA
CATTACCGAAAACGCTCATCTTTGTTTTCCATCCAAATTCCAAAGACAGA
GAAATTCATAGCGTCATGATATAGGAAACTTGCTAAAGCTCTGGTTTACT
TTTGTAATTTGACACCAATGTGTCAAACCAAGGAGCTCCAAAAGACCTTC
TTGGTCAAACAAGGCAAATCGGGGTCATGTGGTCAACATGTCTTCAACAA
AGAAGCCTAATCTCAGTTAATCCTCTTTGGACCTTTTAGCTCCAACCTCA
TTGTTATCTCAACAGTTTGGATATAACATGTTACATGTTATAACATAATG
TATATGTCAGGATGGAGATCGCGATCTAGCAGAATCGCTGATTCTATCAT
GAGATCCCGAACAGAGACTCTGATCAGATGTTAGGAATGTGTTAGGGTCT
CCCTTTTATAAGTCCTAATTTTTAAGTCAATTCATTGACCTTAAGTGACA
TGAATCGAAGTTGAAACGTTCTGACTGTCTTTTATGGGAATATCTTTGAA
TTTACAGACTCCGATCGGGATCTCCACCGAGAGAGTATCTCTACCCTGAC
ATATATAAAGATGATACAGTGTTGTTGTTGACATATAATTCAAACATCAG
GCGAATTTTCCGTTAAATTAAACCCGGACTATTCCGTGCCTCTCCTGTCA
TCTCAGGTTACACCTGGGCGTCTCAGGTGCGCGCCGGGCGGAGCGGTGCG
CTTTGATGTCGCAGGTGAGGCTGTGACGTGTGTGATGGGCACAGCGGGAG
GACTGACACCGCGGGGAGGGGGGCAGGAACAGACTCGCTTGTTTGTTTGT
TCATGAGAAGCTCGAATCGGCCTGCAGGCCGCTTTTAATGGAGGTCATGG
GGAAAAACACTTTATGAGATACAATATTTATCTATTTGTTTTGTTGTTCG
TTTCGGGCTAAAAGGCCCATACACACACATACACAGCTGGAAACAACAAC
GATATATGAATGAAAAACGCATTTGTATGATATCTTGCATAGGCTTCATT
CCACTAAGTGAACTAGGAAACGTGATACGGCTTTTTTTCTCTTTTAAAAT
CATGTATAAAGTTATCCTCCGCCAGGAAATAGGGTGAATGATTATAGGAG
AGTGAGCGGTAAGAGTTACATTCATCCTATGGTGGTTAAACTTGCTTGAC
AAATGTTTCTTAATATATGTCTAGCTTTTACTATTTTCCAGCCAGCGTAT
TAGTCTGGTGGAGACTGAATATAAGTAATGAAACTTACTGTCAACCTCTT
CTGATATATCATTATAGTGCCCTCTTGTGTTCATGCTTAATAAATGATAG
GTCTGCTGTTCCAGCTGCCTGATGACGATCACGGCTGCCGTTCGCGTCTG
TCATCACGCAGCGGCTGCGGCGACGTGCGGGGACTTGTGA

Coding sequence (CDS) from alignment at Sc0000042:863766..865355-

>Blg00527.0 ID=Blg00527.0|Name=Blg00527.0|organism=Branchiostoma lanceolatum|type=CDS|length=249bp|location=Sequence derived from alignment at Sc0000042:863766..865355- (Branchiostoma lanceolatum)
ATGGGAGGGCCGCCAGAAATCAGGAGAAGTCAGGAAAAGGTTACACCTGG
GCGTCTCAGGTGCGCGCCGGGCGGAGCGGTGCGCTTTGATGTCGCAGGTG
AGGCTGTGACGTGTGTGATGGGCACAGCGGGAGGACTGACACCGCGGGGA
GGGGGGCAGGAACAGACTCGCTTCTGCCTGATGACGATCACGGCTGCCGT
TCGCGTCTGTCATCACGCAGCGGCTGCGGCGACGTGCGGGGACTTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00527.0Blg00527.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00527.0-exon-Sc0000042-1570713199:865317..865355Blg00527.0-exon-Sc0000042-1570713199:865317..865355Branchiostoma lanceolatumexon
Blg00527.0-exon-Sc0000042-1570713199:864366..864499Blg00527.0-exon-Sc0000042-1570713199:864366..864499Branchiostoma lanceolatumexon
Blg00527.0-exon-Sc0000042-1570713199:863766..863841Blg00527.0-exon-Sc0000042-1570713199:863766..863841Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000042genomeSc0000042:863766..865355 -
Properties
Property NameValue
GeneIDBlg00527