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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1048884..1056684- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00525.0 ID=Blg00525.0|Name=Blg00525.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7801bp|location=Sequence derived from alignment at Sc0000042:1048884..1056684- (Branchiostoma lanceolatum)
ATGTCGTTACTTACATTAGATGCCGCTGTTGTGTCCACCACCCATGGCGA
CGTGAGCGGTTCAGAGTTCATGACCGCCTCTGTCGTCGGAAATGCCGTCT
TTGACCGCGTCTTCACATTCAAGGGGATTCCTTACGCCGCTCCGCCTGTG
GGGGACCTCAGGTAGGTGTTTTAAAAAGAAGAAAAAACTGAGAAAGACTC
AGGCATATGAGTGAATGAAATGAGTGAATTTATGAAAAGCCTCTCACTGA
AGTAGCCAAGTAAGAGCGGGGATTCAATAAATCAACGTATGGATGGATAG
GTGGGTGGATGGATGGATGGATGGGTGCAGGCACGGATGGATGGATGGGT
GGGTGGAGGCACGGATGGATGGGTGGATGGAGGCATGCATGGGTGGATGG
ATCGAGGCATGGATGGATGAAGGCATGGATGGATGGTTGGATGGGTGGAT
GGCTGGATGGAGGTATGGAATGTGGATGGATGGATGGAGGTATGGATGGT
GGATGGATGGATGGAGGCACGGATGGATGGATGGATCGAAGCATGGATGG
ATGGTTGGATGGATGGAGGCACGGATAGATGGATGGATGGAGGCACGGAT
GGATGGATGGAGGCATGGATGGATGGATGGATGGANTAAGTAAGAGCGGG
GATTCAATAAATCAACGTATGGATGGATAGGTGGGTGGATGGATGGATGG
ATGGGTGCAGGCACGGATGGATGGATGGGTGGGTGGAGGCACGGATGGAT
GGGTGGATGGAGGCATGCATGGGTGGATGGATCGAGGCATGGATGGATGA
AGGGATGGATGGATGGTTGGATGGATGGATGGATGGATGACATGGACAGA
TGGATGGATGTAGGTATGGATGGATGGATGGATGGAGGCACGGATGGATG
GATGGATGGATTGATCGAGGCATGCATAGATGCACGGATGGATGGATTGA
TGAATTAATTGTATTTGATAATACGTTAAACCTCATCATATCACCTTCTG
TTACCCTTCCCGCCGCTAGGTGGCGCCCTCCCCAGGACCCCGACAGCTGG
GCAGGTGTCCGTGACGTCACAGAGTACGGGCCCGCTTGTATCCAGGACCC
TAACGCGCAGCCGCCGCCAGACCCCCTCTACAGGGAACTCTCCCCACCCA
CCAACTCCAGCAGCGAGGACTGCCTGTTCCTGAACGTGTACACCCCAAAC
GTTTCCGTCACTGCCAACCTGCCTGTAAGTATACAATACTCGCAATCGGG
GAAGGGGTTATTCCACCACAGAGTTGACCTCAAACACTCCCTGGCAGTAC
ACTAAAAAAACTGCACTTCAGAGACACCTACACACATCCCACACACATGC
ATGCACATCCACATGCGCAGACACTCACACACACACACACACACACACAC
ACACATGCACAGACACATACACAGACAAACACAACCACAGACACACACAA
GCACACACGAACATACATATACACGTCAAATACACGCACTCACACAGACA
CGCACACACACATACACACACACATAGAGAGAGAGAACGAACATACACGT
ACACACACACACATATTCACACAGGGACAGAGACGGACAGGCATACAGAA
AAACACATTGTTTTACTCCCTTGGGTTGAAGTAACAACATTCACTGTGTC
CACACACACACACACACACACACACACACACACACACATACAGTGACATA
CAGACAAACACATTGTTTTACTCTCTTGGATTCATGAACTAACAACATTC
ACTGTGTTCAACGGATCAGATCCATATAAATCTATCTTGCAGGTGATGGT
GTGGTTCCATGGTGGAGGCATGGTCCGTGGCACTGGCGCACGCTACCCAG
CTGAGATCCCCACGTCACTCCATAACGTCGTCATGGTAACCATAAACTAC
CGTCTGGGCAACCTGGGCTTCCTGCCGACCCGGGCCGATGACGCACCGGG
TAACTTTGGTCTCCTGGACGCGGTTAGTTCATATTCTCCTACTAAGGATT
TCGCGATGTGTACGTTTGGTTATTGTCGTTCTTGCTCCAGCATGCTACCT
TCCTGGTTGTCAAATGCATCCAGACTGTTTTAGATCTTTCTAGATCATTT
TTCATCAAGCCTATTTGGTCTAGGTAGGTAGATAGGTTGGTAGGTAGGTA
GGTAGGTAGGTCTGTAGTGCCCCTTAATTACCTTCTGTGTTTTACTCTGT
CTTAACGTTGTGTTTGACCACGAATTCGACATTGTCTTCTCACAGATGAA
AGCTCTCCAGTGGGTTCAGGCCGACATCCGGAACTTCGGAGGAGATCCCG
ACAGGGTCACCATCTTCGGCCAGTCCGGCGGAGGCTGGGCCGTCTCCCTG
CTCGTCATGTCTCCCATGGCAACGGGACTGTTCCACCGGGCCATCTCTCA
GAGTGGCGTGGCGGGAATCGCAATCACCCAGAAGGGTGACCTCACACAAA
CGGAAACCCTCGCTGCCGTGTTGAACTGCAGCACGGCCTCCTACGATGAC
ATGATGAGCTGTCTACGAGGGTATGTTCGGACTTTCGGTGTGTTCGAACG
TTCAGTGTGTTCGAACGTTCGGTGTGTTCGAACGTTCGGTGTGTTCAAAC
GTTTGTTCGAACGTTCAGTGTGTACGAACGTTCAGTTTGTTTGAACGTTC
GGTGTGTTCGAACGTTCGGTGTGTTCGAACGTTCGTTGTTTTCCAACACA
CGGGCTTAGTGTGTTTGACCGTTAAGTATGTTCGAATGTTCGAATGTTCT
GCGCGTTCCAACACACGGGTTCAGTGTGTTCGAATGGTTTTTGATTTAGA
ATTTGATTTCAGGACGTTATTGTGACTCCTGAACAGGCTAGAGACTCTAG
TACATGTATTTCTCACAATTTGAATTAGATTTATGTAAAGGAAGGTGGAG
AATACACAGCAACGACAATGTGAATTTGATTCGATTGATTTGATTTTCAT
CTATCTGAAACTTGTATATCATGGACTGTTTTCGCACAGAAAGCCAAGTG
GAGCCATAGCAACAGGGACGACCGCAACGGCTCTCATCGGCGGCAGGTTT
CTTCCCGAGAGCCCATGGGTACTTTTTCTGTTATATTCTGTCACTTAAAA
GTGTTGTTTGGAAGTGATGTTTAGACAGACGCGAGACCGTTGAGCGTCCA
AACGTTTGACAAATATCTCATTCATCTCTCAATAATCTTCCAGTGATCTT
TCAGTGACCTTCCAATGTCTGACATTGCCAATTATCTCTTAATGATGTTC
CAATTATGTCTTAATGGTCTTGCGGTGATCTGTCAGCAATCTCTCAATAG
TGTCCAAGGTCCTCCAATGATCTCTCATTGTCTTCAAAGACCAATGATTG
TGTCTACCAATGATTATATCCCTAATGATTCATTGCCAAAGACGGCAGAG
AATAAGACCAGATATTTGCGACACCATCCTCCTGTGTTAGACACAAATGA
GCTTTCTTACCAAAATTCATTACATTTTTAAAGTAAGTTATTGTAAGTTT
TGTTATAGGCATTTCTATATGTATTGTTATGTATTCTCTATATAAATATT
TTTTTTAGTAAGTTCACATTTTTCACTATATGACATTTGACCTTCGAACG
TACTTGCCTATTTTATCTTGTGTATATAATGATGACTCAACGATGTCAAA
TTGAATTGTTAAAATTGACTGAATGATTGATAATAGCAGTGTATAAATAG
TTTATATGTGTAAATTGCAATCGTTTATGTATCTGTCTGTCCCTAAACGT
TGACTCTCAAACATCAGCTGTGCTGCCNGATCGAATGTTCTGCGCGTTCC
AACACACGGGTTCAGTGTGTTCGAATGGTTTTTGATTTAGAATTTGATTT
CAGGACGTTACTGTGACTCCTGAACAGGCTAGAGACTCTAGTACATGTAT
TTCTCACAATTTGAATTAGATTTATGTAAAGGAAGGTGGAGAATACACAG
CAACGACAATGTGAATTTGATTCGATTGATTTGATTTTCATCTATCTGAA
ACTTGTATATCATGGACTGTTTTCGCACAGAAAGCCAAGTGGAGCCATAG
CAACAGGGACGACCGCAACGGCTCTCATCGGCGGCAGGTTTCTCCCCGAG
AGACCATGGGTACTGTTTCTGTTATATTCTGTCACTTATAAGTGTTGTTT
GGAAGTGATGTTTAGACAGACGCGAGACCGTTGAGCGTCCAAACGTTTGA
CAAATATCTCATTCATCTCTCAATAATCTTCCAGTGATCTTTCAGTGACC
TTCCAATGTCTGACATTGCCAATTATCTCTTAATGATGTTCCAATTATGT
CTTAATGGTCTTGCGGTGATCTGTCAGCAATCTCTCAATAGTGTCCAAGG
TCCTCCAATGATCTCTCATTGTCTTCAAAGACCAATGATTGTGTCTACCA
ATGATTATGTCCCTAATGATTCATTGCCAAAGACGGCAGAGAATAAGACC
AGATATTTGCGACACCATCCTCCTGTGTTAGACACAAATGAGCTTTCTTA
CCAAAATTCATTACATTTTTAAAGTAAGTTATTGTAAGTTTTGTTATAGG
CATTTCTATATGTATTGTTATGTATTCTCTATATAAATATTTTTTTTAGT
AAGTTCACATTTTTCACTATATGACATTTGACCTTCGAACGTACTTGCCT
ATTTTATCTTGTGTATATAATGATGACTCAACGATGTCAAATTGAATTGT
TAAAATTGACTGAATGATTGATAATAGCAGTGTATAAATAGTTTATATGT
GTAAATTGCAATCGTTTATGTATCTGTCTGTCCCTAAACGTTGACTCTCA
AACATCAGCTGTGCTGCCTCGAGAGTAAGTGTAGTGTGCTGTAACACTTG
TATTCATTTCCTTTCTCTGTATGTGTTTATATGGGCTATATGCCTAAAAT
AAGTTGAATTGGATCAAATTGAATTGAATTGAATGCACGGCATGCCTGTC
ACAGGACATGATGTACAAGAACCGGATCAATCGGGTTGACTACCTCCTGG
GAACCAACAACGACGAGAACGCCTTTAGAGACAACGATGGGCTGACCAGA
CAGGAGTTCGAGTTTCGACTGTCCTTCAGTCTGCGCCGAATTGCTGCCCA
ATACTTGGTAAGCCTAGCTACCTCATATGGGTGCTGGCACTCACGTGATC
ATGACGTAAGTATTTTCCTCCATACTCGTCGGTTAGAGCTGGAGGGAATG
AGCGGGAAGATGACCGCAAAGTTCAGAGGTGTTGGAGTGGCACGACTTAC
AGTTCCGAGGTAGAAGAACTATAGTCATTAATAAGACATGACAGTCCAGG
TCATGGGGTCAACGGAACATGCTACTTATTCACGGGGAGGTATTGCATTT
GGTCTGTCTGTGTTTTCGCAGATGTTTACTTTCCATGTGCTAGTCACGTT
CACTGTAGATCTAGAGTGACAGGAAGGGATCAACGGGACACATGTAATGT
TAATCAGAATCTTATTTGCATAATCAATTATCTACAATTGAAGAAGTAGC
CTGGTCCCAGTCTCTACGGGTCGGCTTAGGTGTGTTCTATCGGGCCCAGT
CTGCTATATTGACCCGTTTCTATCGGTCTGCCTTCTTAGCTGCCATATAT
ATAGTTTTGCAGCCACCGTAGTGTCGCCGTCACCGCGAGCTAATTAAAGC
CAAGGCCGTAAACCCACCCCCGGGCGGGTGAATCTGTCTGGGCGGGTGGG
CATCACTCCCAGCACCGAAGAGAAACCGGGGAGCTCCCGACGGTATGGTT
TCCAGGCTATTGAAGAAGTAGAGATAAAGATATTTCAGAGAGGCGCGAGA
TGACTGAGATCCTTGCCCCCTTGCTCCGCAGGGTGGCATGGTGAACGAGA
TCCTCCAGCCCGTGATAGACCAGTACGTGGACCCTGCCAGTGCGGACGAC
CCGATCTACCTACGGGACCAGTTCGTAAAGCAGGCCACTGATTCGACTTT
CGCCGCTCCGACCGTCATGATGGCTCAGGCCGCGTCAGGTTTAGCATGAT
CATCTTACATTACCGTTCTGATCTTTGATCTTTTCGTTGATTTTCTTGTA
ATTGCAACAGTGCAATACATGTGGAACACAGGCAGCTATTGCTGATGTCG
TGACCCACACGTTTTTTACACTTGGCTGGAGTGGGGAAAGTGCCTTTTTT
CCCAAGGTCACAAGATCGGTGGCGTCAAGGGATTCGAACCCGGGACCCCT
AGGTTCTGGGCCTAAAACCATGCCGTTACGCCACACGACCCTGATCTTCG
ACAGAGTTACAGTTACTCAAGCAACTTGGTAGATCTTGGAAATGGTTAGA
CGTTTAGGTAGCATCCACTACCTTTCCCAGTGACGCAGTGAGTACAGATC
TTCCTCAGGATCACGAAAGGATGGATGCTACCTACACCATTTCCATGCCC
AAGGGGGAAATGTTAAGTTGTATTATTTTTAATCAAGTTTTGTTTCTGAA
ATGCTGAATTTTGTCTCCTCACAGCTTACGGCCGCGATCACGTGTACCAG
TACGAGTTCCAGCGCCCCTCGTCGGTGTTCACCTATCGGCCTTCGTACAT
CAGGGCCGACCACGGGGACGAGCTGTTCTACATCTTCGGGATCCCGCTCC
TGCGTGACGTCACCGGCAACTCCTGGAAGTACAGCTTCACCCAGGAGGAG
AGAGACCTGAGTCTGGACATGATGGCGTACTGGGTCAACTTCGCCACTAA
CGGGTGCGTGCTTACCTGATATTTTATCAATTTAAAGAAAACGAAATGCA
CTGGTAATTTTTAGATACCACAGAAAGTCTGCAAATCATAAAAGACTCCG
GTCTCTTCTTAACATTCGATGCAAAGTGCACGTGCTTTTTTCCCTTTCTG
TCTCTCTCTCTCCCCCCCTCTCTCTCTCTCCGTCTCTCTTTCTGTGACTC
TGACTCTCTGAGTATGGACATGATGGCGTACTGGGTCACAACTTCGCCGC
TAACGGGTGGGAATTTTCTTTTGATGATGGTATCATAATGTCGCCAACAA
GAGCTGGTGTGCTTGGCTACATGTAGAAACGCAAGCTGTGGGGAAGTCGC
ATTGCATTGCAGTCTTAGGCCGACAGGAAAAAGGAACAAAAGAGCCAATC
ATTTAAATAGTGAAATAGATCATAGTTGCATAATCTCATTTCTATGGTTT
ACGGTTGCGGTTTTTTACCCGGTCCTATTGTTTGCTATAGTACTTTATTG
TGGTTTGTTATAAAAAAATCCCAAAGTTGTCTCTATTTGACAAATGATTA
ATCAATAGATTGTCTCTTGTTTTGTGTGACCGGAATAGATTATTTCATTT
CTGTACCAAAGGAATAAGCCCATTCGCAAGGTTCCAACTACGCAAGTGCA
GTGTCAAAGGTAAAGGCCCCCGAGACGTAAACAAAATCCGTCGGGCGTTG
TTATGCAAATCTAGACAATGTAGAGAACTGTTTACAAGCTGGGTGCCTTC
ACCTTTGACACTGCACACGCGCAGTCGGAACCGCGAATGGGCTTATATGA
CAAAGCTTCATTTTGCTTCAGAGATCCAAACGACTCATCTGGGGCTACGC
GCATGCGTGACCTGGTGACCTGGCCTCGCTACATGGCGTCGTCCCAATCG
TACCTCCAGCTGGACGTGACGTCATCTACTAGCGTCAGACTCCGGGAGGA
CCTGCTGAAGTTTTGGAACGAGGAGGTGCCGAGGCTGCTGGGAAAACACG
TTCACGTTCACCCCGGTGTCAAGTCTGGTGACAGCGGCGGGCCTTCGCCT
AGCCATTTTGTTCTGGCCTTCCTGTTTGTTGTTTCCTATCTCTTTGCCTA
A Coding sequence (CDS) from alignment at Sc0000042:1048884..1056684- >Blg00525.0 ID=Blg00525.0|Name=Blg00525.0|organism=Branchiostoma lanceolatum|type=CDS|length=1719bp|location=Sequence derived from alignment at Sc0000042:1048884..1056684- (Branchiostoma lanceolatum)
ATGTCGTTACTTACATTAGATGCCGCTGTTGTGTCCACCACCCATGGCGA
CGTGAGCGGTTCAGAGTTCATGACCGCCTCTGTCGTCGGAAATGCCGTCT
TTGACCGCGTCTTCACATTCAAGGGGATTCCTTACGCCGCTCCGCCTGTG
GGGGACCTCAGGTGGCGCCCTCCCCAGGACCCCGACAGCTGGGCAGGTGT
CCGTGACGTCACAGAGTACGGGCCCGCTTGTATCCAGGACCCTAACGCGC
AGCCGCCGCCAGACCCCCTCTACAGGGAACTCTCCCCACCCACCAACTCC
AGCAGCGAGGACTGCCTGTTCCTGAACGTGTACACCCCAAACGTTTCCGT
CACTGCCAACCTGCCTGTGATGGTGTGGTTCCATGGTGGAGGCATGGTCC
GTGGCACTGGCGCACGCTACCCAGCTGAGATCCCCACGTCACTCCATAAC
GTCGTCATGGTAACCATAAACTACCGTCTGGGCAACCTGGGCTTCCTGCC
GACCCGGGCCGATGACGCACCGGGTAACTTTGGTCTCCTGGACGCGATGA
AAGCTCTCCAGTGGGTTCAGGCCGACATCCGGAACTTCGGAGGAGATCCC
GACAGGGTCACCATCTTCGGCCAGTCCGGCGGAGGCTGGGCCGTCTCCCT
GCTCGTCATGTCTCCCATGGCAACGGGACTGTTCCACCGGGCCATCTCTC
AGAGTGGCGTGGCGGGAATCGCAATCACCCAGAAGGGTGACCTCACACAA
ACGGAAACCCTCGCTGCCGTGTTGAACTGCAGCACGGCCTCCTACGATGA
CATGATGAGCTGTCTACGAGGAAAGCCAAGTGGAGCCATAGCAACAGGGA
CGACCGCAACGGCTCTCATCGGCGGCAGGTTTCTCCCCGAGAGACCATGG
GACATGATGTACAAGAACCGGATCAATCGGGTTGACTACCTCCTGGGAAC
CAACAACGACGAGAACGCCTTTAGAGACAACGATGGGCTGACCAGACAGG
AGTTCGAGTTTCGACTGTCCTTCAGTCTGCGCCGAATTGCTGCCCAATAC
TTGGGTGGCATGGTGAACGAGATCCTCCAGCCCGTGATAGACCAGTACGT
GGACCCTGCCAGTGCGGACGACCCGATCTACCTACGGGACCAGTTCGTAA
AGCAGGCCACTGATTCGACTTTCGCCGCTCCGACCGTCATGATGGCTCAG
GCCGCGTCAGCTTACGGCCGCGATCACGTGTACCAGTACGAGTTCCAGCG
CCCCTCGTCGGTGTTCACCTATCGGCCTTCGTACATCAGGGCCGACCACG
GGGACGAGCTGTTCTACATCTTCGGGATCCCGCTCCTGCGTGACGTCACC
GGCAACTCCTGGAAGTACAGCTTCACCCAGGAGGAGAGAGACCTGAGTCT
GGACATGATGGCGTACTGGGTCAACTTCGCCACTAACGGAGATCCAAACG
ACTCATCTGGGGCTACGCGCATGCGTGACCTGGTGACCTGGCCTCGCTAC
ATGGCGTCGTCCCAATCGTACCTCCAGCTGGACGTGACGTCATCTACTAG
CGTCAGACTCCGGGAGGACCTGCTGAAGTTTTGGAACGAGGAGGTGCCGA
GGCTGCTGGGAAAACACGTTCACGTTCACCCCGGTGTCAAGTCTGGTGAC
AGCGGCGGGCCTTCGCCTAGCCATTTTGTTCTGGCCTTCCTGTTTGTTGT
TTCCTATCTCTTTGCCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00525.0-exon-Sc0000042-1570713199:1056524..1056684 | Blg00525.0-exon-Sc0000042-1570713199:1056524..1056684 | Branchiostoma lanceolatum | exon |
| Blg00525.0-exon-Sc0000042-1570713199:1055461..1055665 | Blg00525.0-exon-Sc0000042-1570713199:1055461..1055665 | Branchiostoma lanceolatum | exon |
| Blg00525.0-exon-Sc0000042-1570713199:1054713..1054892 | Blg00525.0-exon-Sc0000042-1570713199:1054713..1054892 | Branchiostoma lanceolatum | exon |
| Blg00525.0-exon-Sc0000042-1570713199:1054165..1054439 | Blg00525.0-exon-Sc0000042-1570713199:1054165..1054439 | Branchiostoma lanceolatum | exon |
| Blg00525.0-exon-Sc0000042-1570713199:1052576..1052654 | Blg00525.0-exon-Sc0000042-1570713199:1052576..1052654 | Branchiostoma lanceolatum | exon |
| Blg00525.0-exon-Sc0000042-1570713199:1051578..1051730 | Blg00525.0-exon-Sc0000042-1570713199:1051578..1051730 | Branchiostoma lanceolatum | exon |
| Blg00525.0-exon-Sc0000042-1570713199:1050697..1050853 | Blg00525.0-exon-Sc0000042-1570713199:1050697..1050853 | Branchiostoma lanceolatum | exon |
| Blg00525.0-exon-Sc0000042-1570713199:1049982..1050210 | Blg00525.0-exon-Sc0000042-1570713199:1049982..1050210 | Branchiostoma lanceolatum | exon |
| Blg00525.0-exon-Sc0000042-1570713199:1048884..1049163 | Blg00525.0-exon-Sc0000042-1570713199:1048884..1049163 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1048884..1056684 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00525 |
|
