|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:840383..844896+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00522.0 ID=Blg00522.0|Name=Blg00522.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4514bp|location=Sequence derived from alignment at Sc0000042:840383..844896+ (Branchiostoma lanceolatum)
TTTACATACGGTTCAAGAGTTAGGGCGCACTACTTTTTTACCGCTACGTC
ACAGACTCGGTGAAATACTGTGTGCTGCTACCTCAAGGTTTGCTGGCGAC
AGTATCCAATTTGCATATTCAACGGGGACGTAGTGGAGAAAATGTCCAGT
TCAAGTTGACATCGCACGGGCGTCAGGGAGGCTTCTTCACATAGACGCGA
GGCTGGAGGGGTCCGGTCTCGAAGACCTTGCCTCTGTGCAGACGGATTAC
GCCCGAGAAATACACAGAGCTATGGCGGAAGCGGACCTCTTGATCGAGGT
TGAAGCCCTTAAGAGTCTCGGTGACGTGTTCTTAGAAAAGGGAAAAATCA
GCGGCGTCTTGGCGGAGTTCGGCAAGGCCCACTCCTTGTACAGCGCCGCA
CTGGCCAGGTGTACTCACATCGGGGAAGTGCAGACCCTACTACATCGCGT
TAAGTACGCAAGAGCATTCATCGACGAAAAATCACCCCCCAACGAAGATA
ACGGTAGGCGTGAGCCGAATGGGGATGTGACTCAGGAACAAAGTTCAGAT
CTAAAAGTGTCGACTTCGAATCGCTTAAAGTTTGCCGAGACAGTTCAAAA
AAGACTAGCAGGCCTCACAGAAGAATCGTTACCAGTCGGCTATGTGAACT
TGTTGGTGGAAAGCGTTGTGGCGTCGGACGTGTTGGCGGAAGTGGAGGCG
CTGAAGGGCCTGGGTGACGCGTACCTGAGGCGGGGCGGAGTGAGCAGGGA
CATGGCGGATTTCACCCGGGCGTCTGCCCTGTACTCCGCCGGCCTTGCGC
GCTGTCAGGACGCAGACAACAGGGACGCTCTCCAACACCGGGTCAGGTAT
ACGGCAAGACTCAGGAAGGAGGAAATTAAGGTAAGCCATCATCTATCTGG
ACATTTTAGAAGGACGTATTGAAGTTGAGCACGAAACCGGAAGAAGACGA
AGAAGAAGAGGAAGACAGACAATGCGGTGGCTATCTAGACAGAACACTCG
TGTACAGAGTTCTTGAAACTTGAAATATATGACAACTGTATATTGCTGGA
TATAAGCCATTAACCCCTGGGCAAGGTACGAGATCACTTCCTTTGTACTC
ATTTTGTGGACACAATTAGATCGATAAATCAGTAAGAAAGCCCTATCAAT
AAACCACTGAACTGTACTCTGTATACAATGCGTCACTTATAAGTTCTATC
ACGCCCTGTGCCCGACTCTTATGTCGCCGGCCAGGTTATATAAATCTATA
TCGCTTATCGCTTTATCTATATTGCTTATTGGGCAGTGAGCAAACACGTC
ACTCTACTCTGTATGCTCGTGACGTTAACGGAAGTCACGATAACTCAATA
ATACAATGCTTAACTTTTTTCCAACACCAAGGTATTCACGGATCAAATTT
TCAACGACCACTGTCGCCTTCCTCAGGGTCAATAATGACCAATCACTGCC
GAACGTAGACTTTATTGACACGTGTCTTTACGGATACGTGACGTCAGCAA
TTGTTCAAACGTGCCAGGAAGTTTATGAGGCCCACTGTCTCTGTTGAGTG
ATGGCTGGAGTGCCCTGATGTATATGGCCTCCTCAGTATACCTCTCATAA
CTCAATAATGGACAAAATCCACGCTGACTAGCCTCCTGTGCAGGCTTCCT
ATAACGGCGGCATATATATTGGGAGGGGGGGGGGGAGTTGTGTAGCCGAG
GGAGTTGTGTAGCCGAGGGGCGCGCCGTTATCTAGATAACGGCGCGCCCC
TCGGCTACACAACTCCCTCGGCTACACAACTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCCCCCCCCCCTCCCAATATCTATGCCGCCGTTATAGGAAGCCTGCA
CAGGAGGCTACACGCTGACATCGTAACCAGATAAATGGTTTACGGCGACG
ATGGTGGTGGCGCACAGTGAAACAATAGGGTGTTAACAACAAACAACTTA
TGTTGGCGCAGTGTATCTATAATGAATATTCGGTGGTACTGTTTGCATAC
CAAGGCCAGTACAAATAACTATCCCGGTCTAATTGCTCCAGGGAAAATAC
GTAAAGTGCAGAAACCAAGCAACAAAAGTCCAGTTCAAACACGCAAGCGA
TAACAGCGACAGCGACGAAGAAGAGTCAATCCAAAGTGAGCCGAATGATC
GCCCTGAAAGGTAAATGATTATCCATCTTTAATTCTTGACTTACTTGACT
TACTGACTTATGTCATGTGCCAGTCTTCCTCCGCCACTCGAACCACTCTG
CCAGCCCAGAAACGCCTGTCTTCCATTGCCCTCGCCAGTGACTCAGGGGG
TAGGCCTGTGTTCTTGTGTAGTACATCCATGAAGGTGAGAGGCTGCCTTC
CTGGCTTTCTCTTCCCGTGCAGGGGTACCCAGAGCACCAGACTGGACACC
ACTTCCTTACTGTTCCTAAAGCAGTGCCCAGCAAACCTGAGTCGCCTATT
TCTCACTTTAATTCTTAAAGAACAGAAATTTGAATCCTTACTTAATTAAG
TTTTTTCCACCGGAGGGGAATATCCTTTTTTCCGAACCGAGGAAGGACAA
TTTACCACGGTAATTTTCAAGGACATTCGAGTTTGTCCATATAAACACTA
TATGCTGCTAAATACCAAAACCAATACATTCTTACAAGATCATTGGGAAA
TGTTTTAGCTCCTACGAAGACCAGTATGAAGCCGGAGTCAGTGCCCTGAG
GAACGGGTCTCTGCAGTCAGCAGAACGGAACTTCGCCTCAGCACTCAAAA
CTGTTCACGGTAAGCAAATTCACAGAAGGTGAGAGGGATATTGTAACAAC
TTTCGCAAGGTCTACTATATCTATACATCCATCCATCCATACATACATAC
ATACATACATACATACATACATACATACATACATACAAATAAGTACATAC
GAGTGAGTTTGTTTACATACAATCATATGGGATAGGGCAACATATTGAAA
TTTAATGTGTCGTATACTTACACATTACTTGTTACATTACATGTTATATT
ATATGACAGAAATGCCCAACATTGATAACCACATTGTCCTACTATGAATC
AATTCCTATGATATTACTGATAGTCTACAACATGACAGCAGACAACAATT
AGCTGTCCACCAGAATGAGACATTAGAAAGTAACTCCCCCTTCGGGAATG
TTTTCAGGCAATGAGGGGGCATTGAAAAAGGAGGCTTCATGCCTGTGCAG
GTTGGGTGATGTCTACGTAGCGAAGGGTAAGAACACAGGAGAGGGAAAAT
GCTTCAGTCAAGCTGCGGCTCTGTACAACGGCGCACTGGTCAGGACAGAC
GATGCGACGGTCAAACGTGAATTAAGTGGGAAACTGAAAGACACGGAAGC
ATCATCCCTCCAGCATGTAGTGCACACCGACAATAGACCCAGTCTAGGTG
ATGTCGACAGGGGACATAAGGAAGTGATACAAAACACGCGGGAAAATGTA
AGACAGAGACTGGAGTCGATTGACCAACAGTTTAACCTCCAAACACATCG
GGAAGATCATCGTGCAATGACGACCGTAGAAACGCAAAGAGCAGACGCCA
TTAAAGACTTGTTTATAGAAATAGCTCAGAGTAGAAAAGAATTTGTAGCT
GTCCTTCTTGACGAATGTATGGAAGTGTTGGGCCCTGCTCCCTGTAAGTA
TGCAGTCATAGGTTTGGGTTCACAGGCAACAGAAACCGTCACTCCGTACT
CTGACCTGGAGTTCGCCATCTTGTTGGACGAAGGTTGCGATACCGATGAA
AACAAGCAGTACTTCCGACTCCTCACCCACTACGTACATCTCAAAGTCAT
CAACCTCGGCGAAACCATAATCCCGGCGATGACCATCAAATCCCTCAATG
ATTTCGAGTCGGACAATCCTGCGGACAACTGGTTCTATGACTCGGAGACT
CCTCGCGGGTTTGCCTTTGACGGATCCATGCCGTGGGCCAGTAAAACACC
ACTAGGCAGAGACAAGACTAAGGCGAAGCCAGCACTCGAGCTGATTCGCA
GCCCGAGTAGCATGGCCGAACTGCAGCAGGAGAACATCGCCGTGTCCGAG
GGGTACCACTTGTCGGACATACTACGGAACGTGTGCTGCCTAACAGGCGA
TACTGGTCTTGTAGAAGAGTACATGAAGATTGTGAATAAAACATTGACAA
ACACTAGAAGGCATGAAGGTAGTGTTAGCCATGCTGGGAAGACGCTGGCT
AAAGACGTTGAGCGCTACGGCAAGCAAGGACTGACGGCAAAGCTTCTCGA
TGTCAAGAAGGACATCTACAGGTTCCCTACGATCTCCATAGACAGTCTGT
GCGTTCTTTGCGGACTGAAACCGGGAAGCGTTTGGAAAGTCATATCAGAC
ATGGAAGAATCAAACATACTGACCAGAGAAAACGCCGATCATCTGAAGGT
GTTGGTCAGCATATCGGCAGAGCTCCGACTGAGAACGTATCTGGCAAACG
GGAAACAATGGTAA Coding sequence (CDS) from alignment at Sc0000042:840383..844896+ >Blg00522.0 ID=Blg00522.0|Name=Blg00522.0|organism=Branchiostoma lanceolatum|type=CDS|length=2136bp|location=Sequence derived from alignment at Sc0000042:840383..844896+ (Branchiostoma lanceolatum)
ATGGCGGAAGCGGACCTCTTGATCGAGGTTGAAGCCCTTAAGAGTCTCGG
TGACGTGTTCTTAGAAAAGGGAAAAATCAGCGGCGTCTTGGCGGAGTTCG
GCAAGGCCCACTCCTTGTACAGCGCCGCACTGGCCAGGTGTACTCACATC
GGGGAAGTGCAGACCCTACTACATCGCGTTAAGTACGCAAGAGCATTCAT
CGACGAAAAATCACCCCCCAACGAAGATAACGGTAGGCGTGAGCCGAATG
GGGATGTGACTCAGGAACAAAGTTCAGATCTAAAAGTGTCGACTTCGAAT
CGCTTAAAGTTTGCCGAGACAGTTCAAAAAAGACTAGCAGGCCTCACAGA
AGAATCGTTACCAGTCGGCTATGTGAACTTGTTGGTGGAAAGCGTTGTGG
CGTCGGACGTGTTGGCGGAAGTGGAGGCGCTGAAGGGCCTGGGTGACGCG
TACCTGAGGCGGGGCGGAGTGAGCAGGGACATGGCGGATTTCACCCGGGC
GTCTGCCCTGTACTCCGCCGGCCTTGCGCGCTGTCAGGACGCAGACAACA
GGGACGCTCTCCAACACCGGGTCAGGTATACGGCAAGACTCAGGAAGGAG
GAAATTAAGGGAAAATACGTAAAGTGCAGAAACCAAGCAACAAAAGTCCA
GTTCAAACACGCAAGCGATAACAGCGACAGCGACGAAGAAGAGTCAATCC
AAAGTGAGCCGAATGATCGCCCTGAAAGCTCCTACGAAGACCAGTATGAA
GCCGGAGTCAGTGCCCTGAGGAACGGGTCTCTGCAGTCAGCAGAACGGAA
CTTCGCCTCAGCACTCAAAACTGTTCACGGCAATGAGGGGGCATTGAAAA
AGGAGGCTTCATGCCTGTGCAGGTTGGGTGATGTCTACGTAGCGAAGGGT
AAGAACACAGGAGAGGGAAAATGCTTCAGTCAAGCTGCGGCTCTGTACAA
CGGCGCACTGGTCAGGACAGACGATGCGACGGTCAAACGTGAATTAAGTG
GGAAACTGAAAGACACGGAAGCATCATCCCTCCAGCATGTAGTGCACACC
GACAATAGACCCAGTCTAGGTGATGTCGACAGGGGACATAAGGAAGTGAT
ACAAAACACGCGGGAAAATGTAAGACAGAGACTGGAGTCGATTGACCAAC
AGTTTAACCTCCAAACACATCGGGAAGATCATCGTGCAATGACGACCGTA
GAAACGCAAAGAGCAGACGCCATTAAAGACTTGTTTATAGAAATAGCTCA
GAGTAGAAAAGAATTTGTAGCTGTCCTTCTTGACGAATGTATGGAAGTGT
TGGGCCCTGCTCCCTGTAAGTATGCAGTCATAGGTTTGGGTTCACAGGCA
ACAGAAACCGTCACTCCGTACTCTGACCTGGAGTTCGCCATCTTGTTGGA
CGAAGGTTGCGATACCGATGAAAACAAGCAGTACTTCCGACTCCTCACCC
ACTACGTACATCTCAAAGTCATCAACCTCGGCGAAACCATAATCCCGGCG
ATGACCATCAAATCCCTCAATGATTTCGAGTCGGACAATCCTGCGGACAA
CTGGTTCTATGACTCGGAGACTCCTCGCGGGTTTGCCTTTGACGGATCCA
TGCCGTGGGCCAGTAAAACACCACTAGGCAGAGACAAGACTAAGGCGAAG
CCAGCACTCGAGCTGATTCGCAGCCCGAGTAGCATGGCCGAACTGCAGCA
GGAGAACATCGCCGTGTCCGAGGGGTACCACTTGTCGGACATACTACGGA
ACGTGTGCTGCCTAACAGGCGATACTGGTCTTGTAGAAGAGTACATGAAG
ATTGTGAATAAAACATTGACAAACACTAGAAGGCATGAAGGTAGTGTTAG
CCATGCTGGGAAGACGCTGGCTAAAGACGTTGAGCGCTACGGCAAGCAAG
GACTGACGGCAAAGCTTCTCGATGTCAAGAAGGACATCTACAGGTTCCCT
ACGATCTCCATAGACAGTCTGTGCGTTCTTTGCGGACTGAAACCGGGAAG
CGTTTGGAAAGTCATATCAGACATGGAAGAATCAAACATACTGACCAGAG
AAAACGCCGATCATCTGAAGGTGTTGGTCAGCATATCGGCAGAGCTCCGA
CTGAGAACGTATCTGGCAAACGGGAAACAATGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00522.0-exon-Sc0000042-1570713199:840383..841262 | Blg00522.0-exon-Sc0000042-1570713199:840383..841262 | Branchiostoma lanceolatum | exon |
| Blg00522.0-exon-Sc0000042-1570713199:842474..842592 | Blg00522.0-exon-Sc0000042-1570713199:842474..842592 | Branchiostoma lanceolatum | exon |
| Blg00522.0-exon-Sc0000042-1570713199:843091..843191 | Blg00522.0-exon-Sc0000042-1570713199:843091..843191 | Branchiostoma lanceolatum | exon |
| Blg00522.0-exon-Sc0000042-1570713199:843590..844896 | Blg00522.0-exon-Sc0000042-1570713199:843590..844896 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:840383..844896 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00522 |
|
