Blg00505.0 (mRNA) - B. lanceolatum

Overview
NameBlg00505.0
Unique NameBlg00505.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000042:919630..922146-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00505.0 ID=Blg00505.0|Name=Blg00505.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2517bp|location=Sequence derived from alignment at Sc0000042:919630..922146- (Branchiostoma lanceolatum)
GAGATCACCCACGCTCGTACCCAGCGCCGCGAAGAAGCCATAGGTTTAGA TCGTGGGCTCAACCAATACACAAAATAAAACTATATGGAATCCACGGCTG TCATTTTGTTTTGTTTTGTGTTTGTCTCAATTACCTTAGCAAATCGTAAG TTGTGTGACTCTTGTGTGCGTCTCTATACAACGTGTGACTGTACACTAGT TAGCTAGTATTTTCTACAGTTACCGAGGCGAAAACAAGACGAAAGTTTAC TATTTCGGGGGTAAAATGTTGCCACAATGGTGATACGTTATATCAAAGGG AACTTTAAAATGTACCTAATTTGGTGGCGCTGCGAGGGTGTTAGATTACC CTTCTAGATTGCCGAGAGGGGAGTTATGTCACGGAAGGGAGTTTGCTACG GTAGCGAGTTTGGCCTTCTCCACAGACACTGGTAGATTTCCATCCAAGAT GGCGCCCGCATATTTAATGAGCCGGTGTTGCCATGCGGGATAATGTATGC AAAGTGCCGACGGAAGCCCGAGCGCGCCCGAGCGCTGGGGGACCCGAGAC ATAATGATATGCAGCTGCTGTGCTACGTCACGATCTGCCAGAAATAGCAC AGCGGAGACACGATCGGGGTATTTCACAACCAAAACAATGGCCGAGCTCC TCTGGCGGCAAAAAGGTGCCAAAATGAAGACATTTGCATTAATAAAAGCC AGTAGATCAAAATCACAACGGTCTGGAAATGGCAGCGAGTGGAGAAAACG TCGGAGAAGGGCTAAAAAACCTGAAAAATACCGCTTGTCGAGCCTCCAGA GAGGGGAGGGTGCCGTGCCCCCACCATGACTGCGACGGCAATGCTGTGTT TTTCCAGAAAGGAGCCGGCCTGGACGTGCACTATCGTTCTAAACACGGCA CAAAATCTGACGCCACGGCGGAAAAAACAGCGAACCAGAAGCTGAGCCAG CTGTGTTTCGAAGAGATGAAGCAGAGACTGCAAGACCTCGAGGTACGTTT GCAGTTGTGAGGATTTGGATGCAATGGACGAGTTATGCTGAATTTATATC ATGCACTGTTAAAGTTATTATAATATTTGCAGTTCGAGGAAGATTTCCAG CAAACAGGGAGACAAGTGCTCTAGGTTACTAAGTGCTATGGGTTTCTAAC TGTTGAGTCGTATATAGTTTACTATTTCTATCTAAGACAAAAGTTAAAGG ACTTCTTGTTTATTTTCAGACTTCAGTAAATAGTATTGTAAAGCCTTGTA ATACAGTAACTGCGTTTCGTGTTGAAATGAAGAGAGTTATTGCAAGCCTG ATAAAGTTCCCCAATAATGCATGTGCAAGTTGTCATTACTGTGAATAGGC TAATTTTGGACATCTGGAAATCATTTTGAAGAAAGAAAAAAACTGAAAAT GTGTGTGTATAACTGGGTTCTCCAACTTATATATCTGTATATTTTGATTA AGTAATACTAAAGACATGAACAAAAGTATTTGTACTTGTATTATAATACA AAAGCCAACTCTTGGATAGTACATTGTACTTATGTTTTGTGTCACCTCTT TGTCTTACACAGGTAAATGAGCAGGCAGGTGAACAGTTCTCAGTGACAAG CCCAGCACTGTCAACTAAAGTCACTGCAACAAGGCCCGAAGTTGCTGCAA AAAATGTCATGTAAGCCGACGATGGCTATATGATAATGAGTTAATTTGCA AGTCACATCTCTTTTTTTAAAATTGTCAACTTGCTTCAATCATTTCAGTA TCAGTGTCAACTTGTATGTTTATGACAGTATCTCTTTTTAGATCTATTTC CTGTTTGTCAAAGGCCTCCTTTTAATCTGCAGCTATTTTAAGTCAGGGTA TTTGATATTCTTTCATGATGGAACATGTATTTAACATCGAGGGAAGTACA ATATACTTCAATAATGGATGACCTGTTCCTCTCAATAAGGATTATTGCCT GTATATTTTTACATAAATGTTGCGACATAAGTTTTGTATGTACAGTTTTT ATCTCAATACATAACTGCTGAATTGACTGAAAGCTGTGAATTGCTAAAGA AGACAGATAAGTTAAATGGAGACCATTTCAATTGTTGTTATAATGATCAT CCCACACCACAAAGGACAAGCAGAAGTAGTATGTATATACATGTCTTTTA TTTACATGGTTGTAAAGTACAGTTCAAAATTAGATCATACCTCTATCAAG TAGGTATGCGGTGTGAATTAACATGAATACTCAAACCTAGAGTACTGATA GTCATGTGCAGAAGTAGTTCAAGTAGTTAAAATAGTACAACCAGTGTAAA TCTCTAACAATACCGTGTCATTACCTGCACACCTTGATATACCATTTTTA TGTTATGCGTCCAGAACTAAATGGCAACATTTGCAATGAAAATAAAAATT GAGTTCGCACGAATGCTTCCTTCATACCACTGGTAATTTGAATGATTCCC AGTTAATAGTATGTAAAATGTAACAAATTTCAAATGCAACTATCCCTCTG GTACTATAATACAAAAA

Coding sequence (CDS) from alignment at Sc0000042:919630..922146-

>Blg00505.0 ID=Blg00505.0|Name=Blg00505.0|organism=Branchiostoma lanceolatum|type=CDS|length=366bp|location=Sequence derived from alignment at Sc0000042:919630..922146- (Branchiostoma lanceolatum)
ATGGCAGCGAGTGGAGAAAACGTCGGAGAAGGGCTAAAAAACCTGAAAAA
TACCGCTTGTCGAGCCTCCAGAGAGGGGAGGGTGCCGTGCCCCCACCATG
ACTGCGACGGCAATGCTGTGTTTTTCCAGAAAGGAGCCGGCCTGGACGTG
CACTATCGTTCTAAACACGGCACAAAATCTGACGCCACGGCGGAAAAAAC
AGCGAACCAGAAGCTGAGCCAGCTGTGTTTCGAAGAGATGAAGCAGAGAC
TGCAAGACCTCGAGGTAAATGAGCAGGCAGGTGAACAGTTCTCAGTGACA
AGCCCAGCACTGTCAACTAAAGTCACTGCAACAAGGCCCGAAGTTGCTGC
AAAAAATGTCATGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00505.0-exon-Sc0000042-1570713199:921155..922146Blg00505.0-exon-Sc0000042-1570713199:921155..922146Branchiostoma lanceolatumexon
Blg00505.0-exon-Sc0000042-1570713199:920465..920584Blg00505.0-exon-Sc0000042-1570713199:920465..920584Branchiostoma lanceolatumexon
Blg00505.0-exon-Sc0000042-1570713199:919630..919910Blg00505.0-exon-Sc0000042-1570713199:919630..919910Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00505.0Blg00505.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000042genomeSc0000042:919630..922146 -
Properties
Property NameValue
GeneIDBlg00505