Blg00444.4 (mRNA) - B. lanceolatum

Overview
NameBlg00444.4
Unique NameBlg00444.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:974869..978565+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00444.4 ID=Blg00444.4|Name=Blg00444.4|organism=Branchiostoma lanceolatum|type=mRNA|length=3697bp|location=Sequence derived from alignment at Sc0000078:974869..978565+ (Branchiostoma lanceolatum)
TCGAACTTTGCACTTCGTCCCAGCTGGTAGCTTGGAGCGCGCGGACTGAC AGGTACCGACTAAAATTGTGCAGAAAGAATAGCTTGCAACGTCAAATACA CCTGTTCAGGTAACACTAAGCTGCTTGTGAACGAACACATTTGTACGAAA ATCTGTTTCATTTAAATTTGCGGAATTGAGCTAAGGGAGCTTACATTTTG GGGGAAGCTAAACTGGGCCGTGTTACATGATGTTACATAATCATGCATGT TTCGGTTGTAGGAGTGTTTTAGGGATTAAAAATGTAGTCTAGATAGCATG TGCTAACCACCAAGCAGATCTTTGGGGTTAAATCATGACGGGTTTTGTGA TCCCTTGGCGAGCTGTATATATGATCAGATCCTGGCCGCAGTCAGAAGCC GTCACGAAATTTGTGCCGAAAGATCTGCTTGGAGATTAGCCTCTGCATCT GGCATGATCACTTTACAACTGTTACATAACTTTAATGGTTAAGTGGTAAG TTATAATGTTGCCTGCGCTGCAAAACCCGTCCTCACAGAATAGTTCTACA TTCATATTTTTTTTGCCACCAATCCTGGTGGAGTTGACTGACCTCATTAC ATGTTGTATAATAACTATAATATACGATACATGTAATCATACTTCACCAA TGGAACAATGTAAAGCGCTTCAGATATAAATGGTGTAACATTAAGTATTG ATATTTACCTTCGTCAAGAAGGTTATGATTTCGGCAGCGTTTGGATGTAA TGTATGTATGTCTGTATATGTTTTAGCAGCATACTGTAAATGCAGAAATG TTCGCGGTGGTTTTATGTTCGTAATTTCGCGGCGACTGTTCACCGCAAAC TTAAAACCACCGCAAACATTTTTGTCCAATACTGTAGCAGTATGTGACTA TAGCGCTGCCGTGAACTTAAAAGCACAAAATAAAGCGCAAAATAAAAACC ATACAAACTTAAATGCATTTACAGTAACTTGAAGCTACGAGAATGGATAG ATTGTTGTGAAACTCGGTACTAGTATGTGGTTAGTTCATGTCCTATCAAA GAAATAATTAGATTTTGGGCCCTTAGTGGCTTTCCTTGGCACTGCAGCAG AATTTCTGGTTCTGATATTTTGTTTTGTGTATGTACAAAGGCTGGAAGTC ATTATTATTATTCTCTAATTTGCAGACATGGATGCAGACGGCCTCACGCC CCAGAAGCAGTTCCAAGAACACTTCTTCACCTGTGCCAGCAGGGGTGATG TGAAGACCATAGAGGATGTGCTACAGCAGGGCACGGTCAAGATAGATGCA ACCAATGACCACGGCTGGACTGCACTCATGTTCGCTGCCAGGACTGGACA GGACAAGGTGGTCAGACTGCTGTTGGACCACGGGTAAATGTTAACTTTTT ATATAGCAGTCATTATCAGTAAGATTCAGTAACAGGGATGTAGGCAAAAG ACTGAGTGGATTTTCTTAACTTCTATCTTGGCTTGAGACATCATGATTAG AGCACCCGGTCTTAGTAGTAAAATACATTGTAAACCATTTTCAAGACAAA GGGACTACTAGTAGAACTGTCATAGACTGTACGCTTGCTAGATCAATAGC TAGCATGCTGAATATATCAACTACTCTCTAGTCTGACTAAATTGCACTCC GATAGCCCCCTGCCCCTGCCAGCAAGAGATTGTGTAAACAGAGGCTAACT ACTATACTAGTATATGCAGAAGAAGGTCACAATTTTCCGAACCAACCTCT GCTTGTAGATTGGAATCAACAGTAAAGCAGGAAGACAGCATCTAATAGAA GATAGCAGCCTTTGGGGTGTCTTTTCTCATATACCATATACTCTAATGGC GTTGTATTTTGAATTTCAGAAAGTTTATGTATTTTTTCTTCTGTTTTAAG ATGTGACACAACAGTGATGAACAAGTCGTGCCAGACAGCTGCAGACATCG CTGCATTTTGGAACCACACGGCCGTTCTGACTGAGCTGGAGAAGAAAGGA CAGACGTCTGACAGTCAGCCACAAAACTTCTGTAACTACTTTGGCTACAA CCCTCTGGATCGCTATGCACACAAGAGGAAGGATGAACAGTGGCTAGAGG AAAAACTCAGGGATCAATCTACTGTTATCCTGCTGTTTCATGATCTTGGG CTTGTGGTGACCAAAGGTGAGAAGCTTGCTGCACAATCACGGGTCACTCA GCCATGCCATTTCACTTTCAACGACACCTCTGCATTGTTCGAGGAACTTG GAACAGAGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGAC AAAACAGATGGANAACGACACCTCTGCATTGTTCGAGGAACTTGGAACAG AGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGACAAAACG GATGGACCAAGTCCTCCTACAAGTGACAAGGAGGAGCATCTCCCTGCATG GTTTGCTCTGGATGTCACATCGATTTCACAAGAGAAAATCCTTAGTATCA AAGAAGGATTGGAGATTGCCTCATCTCCCTTCCCAGGTCTGTTCCAACTA CCTGAGAAAGAGGCAGGGATCGTAGCCCAAGCGAGGTCCCTCCTAGCCTG GCACCAGCGGTACAAGTTCTGCCCAACCTGCGGCAGCGCGGCTGCTGTGG AAGAAGCTGGCTACAAGCGTAGATGTCAGAAGGAGGGGTGTCCGAGTTTG AAGGGCGTACACAACACCTCCTACCCCAGGACTGACCCTGTTGTCATCAT GTTGATTGTCTCCCAGGATGGGAAGAAGTGCTTGCTGGGAAGGGGCAAAC GGTTCCCCGGTAGGATGTACTCCTGTCTGGCTGGCTTTATGGAACCAGGT AAATTCTCGTTCAATGAAGTTTTTTTTTAAAAGTTTCACATATAATCGAA TTTGTTTTGTGTGTGTAGGAACTTAAAAGACTATCAGGTTCATGTATATT GTCTGTTGAGTGAGTCTGAAAAATAAGGTGCACAGAAAGAAATTTGGGTG CACCACATAGAATAAAGTTGAATGTCAGCAAAACATAATTACAGTTTAAT GCTCATATAATTGTAATTAAGAACTCCAATCTGTAATTCTATAGCTAACT TCGAATTTCAAACAAGTAATGCATCAAAGAAAGTGCAACAAAGGGTTAGA TTGCTTTTTCTGATACTGCTTGCTAGTATACTCAATAATACCTTTACCCT TAAGCCTACAAAAATATCTAGGTGCACCAGTGCACCCACAGTCAAAAATT AGGTGCACAGCTCCAATTTGGGGTGCACACAGGTGCACATGCACCCACTA TTTCGAGCCCTGAACAATATATTGTACAGTCATGTGTAATAGCTATAATG CTTTATGATTAACTGTGCCCAGAGATGTGGCTTTTAACCTACATGTGCAC ATTGCCCCCTCCCTCCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAA GTTTACGAGGAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAG CCAACCCTTCCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACG CCACCTCAGAAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAG TGGTTCACCCGGCAGCAGGTAAAACACTCATACTTTCAGTTTCCATTATC ACCAGGTTCTCCCTGGCTCTCCCATAGAAATGAATAAAATCAAGATA

Coding sequence (CDS) from alignment at Sc0000078:974869..978565+

>Blg00444.4 ID=Blg00444.4|Name=Blg00444.4|organism=Branchiostoma lanceolatum|type=CDS|length=1329bp|location=Sequence derived from alignment at Sc0000078:974869..978565+ (Branchiostoma lanceolatum)
ATGGATGCAGACGGCCTCACGCCCCAGAAGCAGTTCCAAGAACACTTCTT
CACCTGTGCCAGCAGGGGTGATGTGAAGACCATAGAGGATGTGCTACAGC
AGGGCACGGTCAAGATAGATGCAACCAATGACCACGGCTGGACTGCACTC
ATGTTCGCTGCCAGGACTGGACAGGACAAGGTGGTCAGACTGCTGTTGGA
CCACGGATGTGACACAACAGTGATGAACAAGTCGTGCCAGACAGCTGCAG
ACATCGCTGCATTTTGGAACCACACGGCCGTTCTGACTGAGCTGGAGAAG
AAAGGACAGACGTCTGACAGTCAGCCACAAAACTTCTGTAACTACTTTGG
CTACAACCCTCTGGATCGCTATGCACACAAGAGGAAGGATGAACAGTGGC
TAGAGGAAAAACTCAGGGATCAATCTACTGTTATCCTGCTGTTTCATGAT
CTTGGGCTTGTGGTGACCAAAGGTGAGAAGCTTGCTGCACAATCACGGGT
CACTCAGCCATGCCATTTCACTTTCAACGACACCTCTGCATTGTTCGAGG
AACTTGGAACAGAGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAA
CCTGACAAAACGGATGGACCAAGTCCTCCTACAAGTGACAAGGAGGAGCA
TCTCCCTGCATGGTTTGCTCTGGATGTCACATCGATTTCACAAGAGAAAA
TCCTTAGTATCAAAGAAGGATTGGAGATTGCCTCATCTCCCTTCCCAGGT
CTGTTCCAACTACCTGAGAAAGAGGCAGGGATCGTAGCCCAAGCGAGGTC
CCTCCTAGCCTGGCACCAGCGGTACAAGTTCTGCCCAACCTGCGGCAGCG
CGGCTGCTGTGGAAGAAGCTGGCTACAAGCGTAGATGTCAGAAGGAGGGG
TGTCCGAGTTTGAAGGGCGTACACAACACCTCCTACCCCAGGACTGACCC
TGTTGTCATCATGTTGATTGTCTCCCAGGATGGGAAGAAGTGCTTGCTGG
GAAGGGGCAAACGGTTCCCCGGTAGGATGTACTCCTGTCTGGCTGGCTTT
ATGGAACCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAAGTTTACGA
GGAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAGCCAACCCT
TCCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACGCCACCTCA
GAAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAGTGGTTCAC
CCGGCAGCAGGTAAAACACTCATACTTTCAGTTTCCATTATCACCAGGTT
CTCCCTGGCTCTCCCATAGAAATGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00444.4Blg00444.4-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00444.4-exon-Sc0000078-1570713199:974869..974977Blg00444.4-exon-Sc0000078-1570713199:974869..974977Branchiostoma lanceolatumexon
Blg00444.4-exon-Sc0000078-1570713199:976044..976251Blg00444.4-exon-Sc0000078-1570713199:976044..976251Branchiostoma lanceolatumexon
Blg00444.4-exon-Sc0000078-1570713199:976769..977155Blg00444.4-exon-Sc0000078-1570713199:976769..977155Branchiostoma lanceolatumexon
Blg00444.4-exon-Sc0000078-1570713199:977250..977716Blg00444.4-exon-Sc0000078-1570713199:977250..977716Branchiostoma lanceolatumexon
Blg00444.4-exon-Sc0000078-1570713199:978287..978565Blg00444.4-exon-Sc0000078-1570713199:978287..978565Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:974869..978565 +
Properties
Property NameValue
GeneIDBlg00444