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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:974869..978565+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00444.4 ID=Blg00444.4|Name=Blg00444.4|organism=Branchiostoma lanceolatum|type=mRNA|length=3697bp|location=Sequence derived from alignment at Sc0000078:974869..978565+ (Branchiostoma lanceolatum) TCGAACTTTGCACTTCGTCCCAGCTGGTAGCTTGGAGCGCGCGGACTGAC
AGGTACCGACTAAAATTGTGCAGAAAGAATAGCTTGCAACGTCAAATACA
CCTGTTCAGGTAACACTAAGCTGCTTGTGAACGAACACATTTGTACGAAA
ATCTGTTTCATTTAAATTTGCGGAATTGAGCTAAGGGAGCTTACATTTTG
GGGGAAGCTAAACTGGGCCGTGTTACATGATGTTACATAATCATGCATGT
TTCGGTTGTAGGAGTGTTTTAGGGATTAAAAATGTAGTCTAGATAGCATG
TGCTAACCACCAAGCAGATCTTTGGGGTTAAATCATGACGGGTTTTGTGA
TCCCTTGGCGAGCTGTATATATGATCAGATCCTGGCCGCAGTCAGAAGCC
GTCACGAAATTTGTGCCGAAAGATCTGCTTGGAGATTAGCCTCTGCATCT
GGCATGATCACTTTACAACTGTTACATAACTTTAATGGTTAAGTGGTAAG
TTATAATGTTGCCTGCGCTGCAAAACCCGTCCTCACAGAATAGTTCTACA
TTCATATTTTTTTTGCCACCAATCCTGGTGGAGTTGACTGACCTCATTAC
ATGTTGTATAATAACTATAATATACGATACATGTAATCATACTTCACCAA
TGGAACAATGTAAAGCGCTTCAGATATAAATGGTGTAACATTAAGTATTG
ATATTTACCTTCGTCAAGAAGGTTATGATTTCGGCAGCGTTTGGATGTAA
TGTATGTATGTCTGTATATGTTTTAGCAGCATACTGTAAATGCAGAAATG
TTCGCGGTGGTTTTATGTTCGTAATTTCGCGGCGACTGTTCACCGCAAAC
TTAAAACCACCGCAAACATTTTTGTCCAATACTGTAGCAGTATGTGACTA
TAGCGCTGCCGTGAACTTAAAAGCACAAAATAAAGCGCAAAATAAAAACC
ATACAAACTTAAATGCATTTACAGTAACTTGAAGCTACGAGAATGGATAG
ATTGTTGTGAAACTCGGTACTAGTATGTGGTTAGTTCATGTCCTATCAAA
GAAATAATTAGATTTTGGGCCCTTAGTGGCTTTCCTTGGCACTGCAGCAG
AATTTCTGGTTCTGATATTTTGTTTTGTGTATGTACAAAGGCTGGAAGTC
ATTATTATTATTCTCTAATTTGCAGACATGGATGCAGACGGCCTCACGCC
CCAGAAGCAGTTCCAAGAACACTTCTTCACCTGTGCCAGCAGGGGTGATG
TGAAGACCATAGAGGATGTGCTACAGCAGGGCACGGTCAAGATAGATGCA
ACCAATGACCACGGCTGGACTGCACTCATGTTCGCTGCCAGGACTGGACA
GGACAAGGTGGTCAGACTGCTGTTGGACCACGGGTAAATGTTAACTTTTT
ATATAGCAGTCATTATCAGTAAGATTCAGTAACAGGGATGTAGGCAAAAG
ACTGAGTGGATTTTCTTAACTTCTATCTTGGCTTGAGACATCATGATTAG
AGCACCCGGTCTTAGTAGTAAAATACATTGTAAACCATTTTCAAGACAAA
GGGACTACTAGTAGAACTGTCATAGACTGTACGCTTGCTAGATCAATAGC
TAGCATGCTGAATATATCAACTACTCTCTAGTCTGACTAAATTGCACTCC
GATAGCCCCCTGCCCCTGCCAGCAAGAGATTGTGTAAACAGAGGCTAACT
ACTATACTAGTATATGCAGAAGAAGGTCACAATTTTCCGAACCAACCTCT
GCTTGTAGATTGGAATCAACAGTAAAGCAGGAAGACAGCATCTAATAGAA
GATAGCAGCCTTTGGGGTGTCTTTTCTCATATACCATATACTCTAATGGC
GTTGTATTTTGAATTTCAGAAAGTTTATGTATTTTTTCTTCTGTTTTAAG
ATGTGACACAACAGTGATGAACAAGTCGTGCCAGACAGCTGCAGACATCG
CTGCATTTTGGAACCACACGGCCGTTCTGACTGAGCTGGAGAAGAAAGGA
CAGACGTCTGACAGTCAGCCACAAAACTTCTGTAACTACTTTGGCTACAA
CCCTCTGGATCGCTATGCACACAAGAGGAAGGATGAACAGTGGCTAGAGG
AAAAACTCAGGGATCAATCTACTGTTATCCTGCTGTTTCATGATCTTGGG
CTTGTGGTGACCAAAGGTGAGAAGCTTGCTGCACAATCACGGGTCACTCA
GCCATGCCATTTCACTTTCAACGACACCTCTGCATTGTTCGAGGAACTTG
GAACAGAGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGAC
AAAACAGATGGANAACGACACCTCTGCATTGTTCGAGGAACTTGGAACAG
AGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGACAAAACG
GATGGACCAAGTCCTCCTACAAGTGACAAGGAGGAGCATCTCCCTGCATG
GTTTGCTCTGGATGTCACATCGATTTCACAAGAGAAAATCCTTAGTATCA
AAGAAGGATTGGAGATTGCCTCATCTCCCTTCCCAGGTCTGTTCCAACTA
CCTGAGAAAGAGGCAGGGATCGTAGCCCAAGCGAGGTCCCTCCTAGCCTG
GCACCAGCGGTACAAGTTCTGCCCAACCTGCGGCAGCGCGGCTGCTGTGG
AAGAAGCTGGCTACAAGCGTAGATGTCAGAAGGAGGGGTGTCCGAGTTTG
AAGGGCGTACACAACACCTCCTACCCCAGGACTGACCCTGTTGTCATCAT
GTTGATTGTCTCCCAGGATGGGAAGAAGTGCTTGCTGGGAAGGGGCAAAC
GGTTCCCCGGTAGGATGTACTCCTGTCTGGCTGGCTTTATGGAACCAGGT
AAATTCTCGTTCAATGAAGTTTTTTTTTAAAAGTTTCACATATAATCGAA
TTTGTTTTGTGTGTGTAGGAACTTAAAAGACTATCAGGTTCATGTATATT
GTCTGTTGAGTGAGTCTGAAAAATAAGGTGCACAGAAAGAAATTTGGGTG
CACCACATAGAATAAAGTTGAATGTCAGCAAAACATAATTACAGTTTAAT
GCTCATATAATTGTAATTAAGAACTCCAATCTGTAATTCTATAGCTAACT
TCGAATTTCAAACAAGTAATGCATCAAAGAAAGTGCAACAAAGGGTTAGA
TTGCTTTTTCTGATACTGCTTGCTAGTATACTCAATAATACCTTTACCCT
TAAGCCTACAAAAATATCTAGGTGCACCAGTGCACCCACAGTCAAAAATT
AGGTGCACAGCTCCAATTTGGGGTGCACACAGGTGCACATGCACCCACTA
TTTCGAGCCCTGAACAATATATTGTACAGTCATGTGTAATAGCTATAATG
CTTTATGATTAACTGTGCCCAGAGATGTGGCTTTTAACCTACATGTGCAC
ATTGCCCCCTCCCTCCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAA
GTTTACGAGGAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAG
CCAACCCTTCCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACG
CCACCTCAGAAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAG
TGGTTCACCCGGCAGCAGGTAAAACACTCATACTTTCAGTTTCCATTATC
ACCAGGTTCTCCCTGGCTCTCCCATAGAAATGAATAAAATCAAGATA Coding sequence (CDS) from alignment at Sc0000078:974869..978565+ >Blg00444.4 ID=Blg00444.4|Name=Blg00444.4|organism=Branchiostoma lanceolatum|type=CDS|length=1329bp|location=Sequence derived from alignment at Sc0000078:974869..978565+ (Branchiostoma lanceolatum) ATGGATGCAGACGGCCTCACGCCCCAGAAGCAGTTCCAAGAACACTTCTT CACCTGTGCCAGCAGGGGTGATGTGAAGACCATAGAGGATGTGCTACAGC AGGGCACGGTCAAGATAGATGCAACCAATGACCACGGCTGGACTGCACTC ATGTTCGCTGCCAGGACTGGACAGGACAAGGTGGTCAGACTGCTGTTGGA CCACGGATGTGACACAACAGTGATGAACAAGTCGTGCCAGACAGCTGCAG ACATCGCTGCATTTTGGAACCACACGGCCGTTCTGACTGAGCTGGAGAAG AAAGGACAGACGTCTGACAGTCAGCCACAAAACTTCTGTAACTACTTTGG CTACAACCCTCTGGATCGCTATGCACACAAGAGGAAGGATGAACAGTGGC TAGAGGAAAAACTCAGGGATCAATCTACTGTTATCCTGCTGTTTCATGAT CTTGGGCTTGTGGTGACCAAAGGTGAGAAGCTTGCTGCACAATCACGGGT CACTCAGCCATGCCATTTCACTTTCAACGACACCTCTGCATTGTTCGAGG AACTTGGAACAGAGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAA CCTGACAAAACGGATGGACCAAGTCCTCCTACAAGTGACAAGGAGGAGCA TCTCCCTGCATGGTTTGCTCTGGATGTCACATCGATTTCACAAGAGAAAA TCCTTAGTATCAAAGAAGGATTGGAGATTGCCTCATCTCCCTTCCCAGGT CTGTTCCAACTACCTGAGAAAGAGGCAGGGATCGTAGCCCAAGCGAGGTC CCTCCTAGCCTGGCACCAGCGGTACAAGTTCTGCCCAACCTGCGGCAGCG CGGCTGCTGTGGAAGAAGCTGGCTACAAGCGTAGATGTCAGAAGGAGGGG TGTCCGAGTTTGAAGGGCGTACACAACACCTCCTACCCCAGGACTGACCC TGTTGTCATCATGTTGATTGTCTCCCAGGATGGGAAGAAGTGCTTGCTGG GAAGGGGCAAACGGTTCCCCGGTAGGATGTACTCCTGTCTGGCTGGCTTT ATGGAACCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAAGTTTACGA GGAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAGCCAACCCT TCCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACGCCACCTCA GAAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAGTGGTTCAC CCGGCAGCAGGTAAAACACTCATACTTTCAGTTTCCATTATCACCAGGTT CTCCCTGGCTCTCCCATAGAAATGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00444.4-exon-Sc0000078-1570713199:974869..974977 | Blg00444.4-exon-Sc0000078-1570713199:974869..974977 | Branchiostoma lanceolatum | exon |
Blg00444.4-exon-Sc0000078-1570713199:976044..976251 | Blg00444.4-exon-Sc0000078-1570713199:976044..976251 | Branchiostoma lanceolatum | exon |
Blg00444.4-exon-Sc0000078-1570713199:976769..977155 | Blg00444.4-exon-Sc0000078-1570713199:976769..977155 | Branchiostoma lanceolatum | exon |
Blg00444.4-exon-Sc0000078-1570713199:977250..977716 | Blg00444.4-exon-Sc0000078-1570713199:977250..977716 | Branchiostoma lanceolatum | exon |
Blg00444.4-exon-Sc0000078-1570713199:978287..978565 | Blg00444.4-exon-Sc0000078-1570713199:978287..978565 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000078 | genome | Sc0000078:974869..978565 + |
Properties
Property Name | Value |
GeneID | Blg00444 |
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