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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:974874..981124+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00444.3 ID=Blg00444.3|Name=Blg00444.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6251bp|location=Sequence derived from alignment at Sc0000078:974874..981124+ (Branchiostoma lanceolatum)
CTTTGCACTTCGTCCCAGCTGGTAGCTTGGAGCGCGCGGACTGACAGGTA
CCGACTAAAATTGTGCAGAAAGAATAGCTTGCAACGTCAAATACACCTGT
TCAGGTAACACTAAGCTGCTTGTGAACGAACACATTTGTACGAAAATCTG
TTTCATTTAAATTTGCGGAATTGAGCTAAGGGAGCTTACATTTTGGGGGA
AGCTAAACTGGGCCGTGTTACATGATGTTACATAATCATGCATGTTTCGG
TTGTAGGAGTGTTTTAGGGATTAAAAATGTAGTCTAGATAGCATGTGCTA
ACCACCAAGCAGATCTTTGGGGTTAAATCATGACGGGTTTTGTGATCCCT
TGGCGAGCTGTATATATGATCAGATCCTGGCCGCAGTCAGAAGCCGTCAC
GAAATTTGTGCCGAAAGATCTGCTTGGAGATTAGCCTCTGCATCTGGCAT
GATCACTTTACAACTGTTACATAACTTTAATGGTTAAGTGGTAAGTTATA
ATGTTGCCTGCGCTGCAAAACCCGTCCTCACAGAATAGTTCTACATTCAT
ATTTTTTTTGCCACCAATCCTGGTGGAGTTGACTGACCTCATTACATGTT
GTATAATAACTATAATATACGATACATGTAATCATACTTCACCAATGGAA
CAATGTAAAGCGCTTCAGATATAAATGGTGTAACATTAAGTATTGATATT
TACCTTCGTCAAGAAGGTTATGATTTCGGCAGCGTTTGGATGTAATGTAT
GTATGTCTGTATATGTTTTAGCAGCATACTGTAAATGCAGAAATGTTCGC
GGTGGTTTTATGTTCGTAATTTCGCGGCGACTGTTCACCGCAAACTTAAA
ACCACCGCAAACATTTTTGTCCAATACTGTAGCAGTATGTGACTATAGCG
CTGCCGTGAACTTAAAAGCACAAAATAAAGCGCAAAATAAAAACCATACA
AACTTAAATGCATTTACAGTAACTTGAAGCTACGAGAATGGATAGATTGT
TGTGAAACTCGGTACTAGTATGTGGTTAGTTCATGTCCTATCAAAGAAAT
AATTAGATTTTGGGCCCTTAGTGGCTTTCCTTGGCACTGCAGCAGAATTT
CTGGTTCTGATATTTTGTTTTGTGTATGTACAAAGGCTGGAAGTCATTAT
TATTATTCTCTAATTTGCAGACATGGATGCAGACGGCCTCACGCCCCAGA
AGCAGTTCCAAGAACACTTCTTCACCTGTGCCAGCAGGGGTGATGTGAAG
ACCATAGAGGATGTGCTACAGCAGGGCACGGTCAAGATAGATGCAACCAA
TGACCACGGCTGGACTGCACTCATGTTCGCTGCCAGGACTGGACAGGACA
AGGTGGTCAGACTGCTGTTGGACCACGGGTAAATGTTAACTTTTTATATA
GCAGTCATTATCAGTAAGATTCAGTAACAGGGATGTAGGCAAAAGACTGA
GTGGATTTTCTTAACTTCTATCTTGGCTTGAGACATCATGATTAGAGCAC
CCGGTCTTAGTAGTAAAATACATTGTAAACCATTTTCAAGACAAAGGGAC
TACTAGTAGAACTGTCATAGACTGTACGCTTGCTAGATCAATAGCTAGCA
TGCTGAATATATCAACTACTCTCTAGTCTGACTAAATTGCACTCCGATAG
CCCCCTGCCCCTGCCAGCAAGAGATTGTGTAAACAGAGGCTAACTACTAT
ACTAGTATATGCAGAAGAAGGTCACAATTTTCCGAACCAACCTCTGCTTG
TAGATTGGAATCAACAGTAAAGCAGGAAGACAGCATCTAATAGAAGATAG
CAGCCTTTGGGGTGTCTTTTCTCATATACCATATACTCTAATGGCGTTGT
ATTTTGAATTTCAGAAAGTTTATGTATTTTTTCTTCTGTTTTAAGATGTG
ACACAACAGTGATGAACAAGTCGTGCCAGACAGCTGCAGACATCGCTGCA
TTTTGGAACCACACGGCCGTTCTGACTGAGCTGGAGAAGAAAGGACAGAC
GTCTGACAGTCAGCCACAAAACTTCTGTAACTACTTTGGCTACAACCCTC
TGGATCGCTATGCACACAAGAGGAAGGATGAACAGTGGCTAGAGGAAAAA
CTCAGGGATCAATCTACTGTTATCCTGCTGTTTCATGATCTTGGGCTTGT
GGTGACCAAAGGTGAGAAGCTTGCTGCACAATCACGGGTCACTCAGCCAT
GCCATTTCACTTTCAACGACACCTCTGCATTGTTCGAGGAACTTGGAACA
GAGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGACAAAAC
AGATGGANAACGACACCTCTGCATTGTTCGAGGAACTTGGAACAGAGAAA
ATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGACAAAACGGATGG
ACCAAGTCCTCCTACAAGTGACAAGGAGGAGCATCTCCCTGCATGGTTTG
CTCTGGATGTCACATCGATTTCACAAGAGAAAATCCTTAGTATCAAAGAA
GGATTGGAGATTGCCTCATCTCCCTTCCCAGGTCTGTTCCAACTACCTGA
GAAAGAGGCAGGGATCGTAGCCCAAGCGAGGTCCCTCCTAGCCTGGCACC
AGCGGTACAAGTTCTGCCCAACCTGCGGCAGCGCGGCTGCTGTGGAAGAA
GCTGGCTACAAGCGTAGATGTCAGAAGGAGGGGTGTCCGAGTTTGAAGGG
CGTACACAACACCTCCTACCCCAGGACTGACCCTGTTGTCATCATGTTGA
TTGTCTCCCAGGATGGGAAGAAGTGCTTGCTGGGAAGGGGCAAACGGTTC
CCCGGTAGGATGTACTCCTGTCTGGCTGGCTTTATGGAACCAGGTAAATT
CTCGTTCAATGAAGTTTTTTTTTAAAAGTTTCACATATAATCGAATTTGT
TTTGTGTGTGTAGGAACTTAAAAGACTATCAGGTTCATGTATATTGTCTG
TTGAGTGAGTCTGAAAAATAAGGTGCACAGAAAGAAATTTGGGTGCACCA
CATAGAATAAAGTTGAATGTCAGCAAAACATAATTACAGTTTAATGCTCA
TATAATTGTAATTAAGAACTCCAATCTGTAATTCTATAGCTAACTTCGAA
TTTCAAACAAGTAATGCATCAAAGAAAGTGCAACAAAGGGTTAGATTGCT
TTTTCTGATACTGCTTGCTAGTATACTCAATAATACCTTTACCCTTAAGC
CTACAAAAATATCTAGGTGCACCAGTGCACCCACAGTCAAAAATTAGGTG
CACAGCTCCAATTTGGGGTGCACACAGGTGCACATGCACCCACTATTTCG
AGCCCTGAACAATATATTGTACAGTCATGTGTAATAGCTATAATGCTTTA
TGATTAACTGTGCCCAGAGATGTGGCTTTTAACCTACATGTGCACATTGC
CCCCTCCCTCCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAAGTTTA
CGAGGAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAGCCAAC
CCTTCCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACGCCACC
TCAGAAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAGTGGTT
CACCCGGCAGCAGGTAAAACACTCATACTTTCAGTTTCCATTATCACCAG
GTTCTCCCTGGCTCTCCCATAGAAATGAATAAAATCAAGATAAAATTTAT
GTTTTGTACAAAGTGCACAAAGTATCTTGTTTACTCTGTTGACCATCGGT
GTACATCATCCTTGTACATTCAAACCTATTTAAGTGCCACCTCTTCATAA
GAACCACCTGGCTGATGTGACAACTTTTTTTGTGGTCCCATTGAAGCATT
AAGAATCCTATCTATATATAGTGACCACCTGTCCATATAGATCAGATTTT
ATTGAGTGGTCTTCTTGGGCAGTTTTGACTGTACTTGAAAGGAAGAAAGA
GGATATAAATGAAATAAACTGTATGAATTTTCATGTATACCAAAGTCCCT
TACCCATTATATTTATGATGACACATCCCTATCTTGGTTAGCTTTAACAT
TTACAAGTTGATATATGAATGTGTCAAAAGGTGGCAGAAGTGCAGACCGG
TGCCCCCCTCCCCACGGATGCCCTGACTAACCCACGTGCTGAAGGCCCCA
GTTTCTTCCTGCCCCCAGCCCAGGCCATCGCACATCAGCTGGTTAAAGCA
TGGCTCAGAATGTCACCTAACCTTTAAACAAAGCTAGAGGGAAGTGCATT
CATTGCACCCCCTATAGGCTTTATAATGTGACATGATGATGATGGTACAG
ATGTTGATTAACATTGAAAGGAAAAATCTGAGAAGAGATGCCTTAGAAAC
CCTTAGACAAAATTTTTATATGAAAGTATTTTTTGATATCAAGTACTTTA
TTTGATTTTCTACAGGAAAAGGTTATAGAAATGGAAGATGTTTTATGATA
GAGAAGTTGACTTTGAGTCCAAAAAATCAATGCCAAAATGATGAATTTTA
TATATTATTTAAGTGTAGACCACTACATACATTTGTAATGGGTTGGAGAG
TAAGTGTGCCATTGCTACAGGAAAAGTAGAAGATTTGTGGCAGCTTAACG
AAATGTATCTAAAAACTTAATAAATGAAAAACCAGAGGACCACAAAAACC
TCAAACCTAACCTCAATATAGCAGTGTTTCTGCTTTTAGGTGGTGATAAA
TAGAAAGCAACCACAGGTAAATTGACTTTTTGGATGTCGGTTAAAATGTC
TTAAAATAGCATCAAGTGTTGTAATGTTCAATTGTTTTGTATCTTTTTTT
AAATTATTTTGTCAGATATTACTTGAAGATTTGATAAAGAATTAATATAA
AGAGATGTATAGTATCATAAATTGATGCAAATTCCACATGTTTAAACATT
GTAATTTGTGTTGAAAGACAGGTAAATTAACTTGAGTGTGAGGTATTTCC
TTGTTGGTCAAAGACATTTTAACATTTGCTGTGCTTTGGTTTAGGCTAAC
TTTTAGAGCATATAGCTTGTAGATGTTCATCTAATAAGCTCATTATAGAT
ATGCCAATGGTTCAGGATGGTTAACTCTGCCAAGACCTTTGTGTCTGAGT
TTCTGAGATGTAGATTGTAATGTTATAGGTGGAGATGTTTGTAGAATAAT
GGTTGCCTAATGTGGACATTGAGATTTTCAAATAACTCTAAATTAGGTCC
AACTGAAAGGCATTTGGAGATTTAAGCAAAAAGGCTATTTTTTTATGAAA
TTTGAAATTTGGCACAACATATTGATGACTGGAATATTAATTCTTGATAG
GCATGTTTAACACCAAGTTTTGTTTAATTCGTTTTCTGAACAGTCTGCCT
GTGTTTATATGTCATTGAATATATTCAACACAAAAATAACAGATCACACA
ATACACATATGCAATGCAGATGTAATTTATTTCCAGGACTAGAGCACTTC
TGACAAACAGTAAACCAAGAAAGACCAGTCTTAATTGTATATATTACTAG
CTGTGACTAAAATCTTAAACACATGTGCTCAAATAAATTCATTCTCAACC
TTTCAGCAGACTTTGTATGTTATCCTTTCTTCAGATAAAGTTGTTCCACA
CTAGAATCACAAAGTCAAGAAAACCCAACCTTTTGCTTCTAACACAAAAT
CATTATCGGAGTATACATAGTGTTTTCAAGGTCATTGTTCTTTCTTTGAC
AGTCGTCAGTCTCACAGACATAAAATATGACATTGATGGTACCTTACCAG
CTTCTTTACCTGATTGGTCAAGGAGATGCCATATGACTAGAAAGCTAAAC
TGAATCCAAAGTGCAAAGTGGAAAAAACTAAAATGCTTGACTTGACAGAA
CATTTCTCTTTATACTTACAAGATGATTATTGTCTAATGCCCAAAAAATA
GAAGGTTATAACAATAAGCATCAAAACGATACTACGTCAAAATGTCGTTA
GAGTCAGACTGTCCAATCAGAAAAGGTGGTTTAGGGAGTCTCGGGTTCGG
TTCCCCACTGCAGGCACTTGCTGATGTCACAAGTACACTCCAGAATGTAG
TCATAGGAGTGCTGCTGGAGAGTTCCGTCCTCACACATCATGTCCACAGT
TCGCCGCTCGCTCTTGGAAGGCTGGCAGCACTGGCACTCATGGCTGTGGG
GTAAGGAAAAGGTGTTATGGAGCATGCCCACAGTTAAATTATCTACAGCC
TGGTTTCTATTAAAATGGCATGTTTTAACCTCCTTGCTGCCTAACACTGT
A Coding sequence (CDS) from alignment at Sc0000078:974874..981124+ >Blg00444.3 ID=Blg00444.3|Name=Blg00444.3|organism=Branchiostoma lanceolatum|type=CDS|length=1407bp|location=Sequence derived from alignment at Sc0000078:974874..981124+ (Branchiostoma lanceolatum)
ATGGATGCAGACGGCCTCACGCCCCAGAAGCAGTTCCAAGAACACTTCTT
CACCTGTGCCAGCAGGGGTGATGTGAAGACCATAGAGGATGTGCTACAGC
AGGGCACGGTCAAGATAGATGCAACCAATGACCACGGCTGGACTGCACTC
ATGTTCGCTGCCAGGACTGGACAGGACAAGGTGGTCAGACTGCTGTTGGA
CCACGGATGTGACACAACAGTGATGAACAAGTCGTGCCAGACAGCTGCAG
ACATCGCTGCATTTTGGAACCACACGGCCGTTCTGACTGAGCTGGAGAAG
AAAGGACAGACGTCTGACAGTCAGCCACAAAACTTCTGTAACTACTTTGG
CTACAACCCTCTGGATCGCTATGCACACAAGAGGAAGGATGAACAGTGGC
TAGAGGAAAAACTCAGGGATCAATCTACTGTTATCCTGCTGTTTCATGAT
CTTGGGCTTGTGGTGACCAAAGGTGAGAAGCTTGCTGCACAATCACGGGT
CACTCAGCCATGCCATTTCACTTTCAACGACACCTCTGCATTGTTCGAGG
AACTTGGAACAGAGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAA
CCTGACAAAACGGATGGACCAAGTCCTCCTACAAGTGACAAGGAGGAGCA
TCTCCCTGCATGGTTTGCTCTGGATGTCACATCGATTTCACAAGAGAAAA
TCCTTAGTATCAAAGAAGGATTGGAGATTGCCTCATCTCCCTTCCCAGGT
CTGTTCCAACTACCTGAGAAAGAGGCAGGGATCGTAGCCCAAGCGAGGTC
CCTCCTAGCCTGGCACCAGCGGTACAAGTTCTGCCCAACCTGCGGCAGCG
CGGCTGCTGTGGAAGAAGCTGGCTACAAGCGTAGATGTCAGAAGGAGGGG
TGTCCGAGTTTGAAGGGCGTACACAACACCTCCTACCCCAGGACTGACCC
TGTTGTCATCATGTTGATTGTCTCCCAGGATGGGAAGAAGTGCTTGCTGG
GAAGGGGCAAACGGTTCCCCGGTAGGATGTACTCCTGTCTGGCTGGCTTT
ATGGAACCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAAGTTTACGA
GGAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAGCCAACCCT
TCCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACGCCACCTCA
GAAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAGTGGTTCAC
CCGGCAGCAGGTGGCAGAAGTGCAGACCGGTGCCCCCCTCCCCACGGATG
CCCTGACTAACCCACGTGCTGAAGGCCCCAGTTTCTTCCTGCCCCCAGCC
CAGGCCATCGCACATCAGCTGGTTAAAGCATGGCTCAGAATGTCACCTAA
CCTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00444.3-exon-Sc0000078-1570713199:974874..974977 | Blg00444.3-exon-Sc0000078-1570713199:974874..974977 | Branchiostoma lanceolatum | exon |
| Blg00444.3-exon-Sc0000078-1570713199:976044..976251 | Blg00444.3-exon-Sc0000078-1570713199:976044..976251 | Branchiostoma lanceolatum | exon |
| Blg00444.3-exon-Sc0000078-1570713199:976769..977155 | Blg00444.3-exon-Sc0000078-1570713199:976769..977155 | Branchiostoma lanceolatum | exon |
| Blg00444.3-exon-Sc0000078-1570713199:977250..977716 | Blg00444.3-exon-Sc0000078-1570713199:977250..977716 | Branchiostoma lanceolatum | exon |
| Blg00444.3-exon-Sc0000078-1570713199:978287..978486 | Blg00444.3-exon-Sc0000078-1570713199:978287..978486 | Branchiostoma lanceolatum | exon |
| Blg00444.3-exon-Sc0000078-1570713199:978954..981124 | Blg00444.3-exon-Sc0000078-1570713199:978954..981124 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000078 | genome | Sc0000078:974874..981124 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00444 |
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