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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:973628..981124+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00444.0 ID=Blg00444.0|Name=Blg00444.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7497bp|location=Sequence derived from alignment at Sc0000078:973628..981124+ (Branchiostoma lanceolatum)
TCATGTGCGTCTTCATCCACTTCTGGCCCTTAGGGTTCAAATATTCCCAG
GGATATTCGGAGAGAGTCAAAAATCATAATTAGACATGGATCAAAATACA
TCGTCCATGTTATCTACGTACCCACTGAAGTCGTCGATCATTCTGATAAT
GATTAATGACAATTAGACAACATTTAACAATGCTTACGACGTGGGAGAAG
ACACAGTAACCAACCACAGTGCGAAATCATTCCTGTAATGGCCAAGTGAA
TGTTTTTCGGAATGTTGAAACATTCAAGTAATGGGAATGCAGTGTTGTAC
AGTTGTGAGCCAAGTGGAGTAGGAAGAAGATAACATAAACAGTAATTACC
TTGTACACAGGTCATAAATGTTAGACGTACCTGCCAGTGTGTCGACGTTA
ACCGGGCTTTGTTTGCCGATGTTTGGAAGAGGAGGACGGTCTAGTGGAGA
CACCGTGATTCGTAATGGACCATCGGGGTCTTCCTCAACCTTTGATGGAT
CCATCCTGTAACACAGCTACTTCAGGTTTCTTTATCTGCTGGTCTATCAA
GCCCTTCCACAAGGCAATGTTCAAGCCTCCATGGTTCAAGGATGGCCACG
TGCACAGCACCGACTTTTATCCTGCCTTCAGAAGTTACATTTTACTTCCC
AGGATGAAACTAAGCGACTGTTCGTGACTGTTCTGATTTTTTTCTGTGTT
TACAGTGATGACCATCTGACGACCCTAACAGCCGTTGTTCCTTGTGATGT
TCAGAATTTCGAACAATAGAACTAAAGAACACCTTTATCTATCTGGGGAC
TGACGTCACTGGCTTACGTTCGGCGCATACGTTCGAGTCATCACAGTCAA
GAACTTGCGGTGGGTGAACACGTGACTGGTGGGTTGAATGTACACTTTTT
TTCTTTCAGTAGTGATCAAGAAAGTATCGTCACAGTGGGTGTGATTGTGA
TATGACGACTAAAAGGTTGATTACTTTAATGACAAATGGGAAAATTACGC
ATGTCACACGGGAAATAGTGCGCGTAAGAGAGAGGCGTTCAAATTATCGT
CAACTTTTATTTATTATGCCACCAGCCGTATAGTTGCAAATTACATCCAC
GTTAGTATGTTATGTAAGTTACATAACAGCGCATTAGCCTTACTATTGTG
TGAAGATTTAGAGTGTAGAAGCCGCAGACCCCTTCATGGGAATGGGCGAT
TCCACGACCTTTGCCCTAGTAACCCGCAGGTCAGTGACCAATCGAACTTT
GCACTTCGTCCCAGCTGGTAGCTTGGAGCGCGCGGACTGACAGGTACCGA
CTAAAATTGTGCAGAAAGAATAGCTTGCAACGTCAAATACACCTGTTCAG
GTAACACTAAGCTGCTTGTGAACGAACACATTTGTACGAAAATCTGTTTC
ATTTAAATTTGCGGAATTGAGCTAAGGGAGCTTACATTTTGGGGGAAGCT
AAACTGGGCCGTGTTACATGATGTTACATAATCATGCATGTTTCGGTTGT
AGGAGTGTTTTAGGGATTAAAAATGTAGTCTAGATAGCATGTGCTAACCA
CCAAGCAGATCTTTGGGGTTAAATCATGACGGGTTTTGTGATCCCTTGGC
GAGCTGTATATATGATCAGATCCTGGCCGCAGTCAGAAGCCGTCACGAAA
TTTGTGCCGAAAGATCTGCTTGGAGATTAGCCTCTGCATCTGGCATGATC
ACTTTACAACTGTTACATAACTTTAATGGTTAAGTGGTAAGTTATAATGT
TGCCTGCGCTGCAAAACCCGTCCTCACAGAATAGTTCTACATTCATATTT
TTTTTGCCACCAATCCTGGTGGAGTTGACTGACCTCATTACATGTTGTAT
AATAACTATAATATACGATACATGTAATCATACTTCACCAATGGAACAAT
GTAAAGCGCTTCAGATATAAATGGTGTAACATTAAGTATTGATATTTACC
TTCGTCAAGAAGGTTATGATTTCGGCAGCGTTTGGATGTAATGTATGTAT
GTCTGTATATGTTTTAGCAGCATACTGTAAATGCAGAAATGTTCGCGGTG
GTTTTATGTTCGTAATTTCGCGGCGACTGTTCACCGCAAACTTAAAACCA
CCGCAAACATTTTTGTCCAATACTGTAGCAGTATGTGACTATAGCGCTGC
CGTGAACTTAAAAGCACAAAATAAAGCGCAAAATAAAAACCATACAAACT
TAAATGCATTTACAGTAACTTGAAGCTACGAGAATGGATAGATTGTTGTG
AAACTCGGTACTAGTATGTGGTTAGTTCATGTCCTATCAAAGAAATAATT
AGATTTTGGGCCCTTAGTGGCTTTCCTTGGCACTGCAGCAGAATTTCTGG
TTCTGATATTTTGTTTTGTGTATGTACAAAGGCTGGAAGTCATTATTATT
ATTCTCTAATTTGCAGACATGGATGCAGACGGCCTCACGCCCCAGAAGCA
GTTCCAAGAACACTTCTTCACCTGTGCCAGCAGGGGTGATGTGAAGACCA
TAGAGGATGTGCTACAGCAGGGCACGGTCAAGATAGATGCAACCAATGAC
CACGGCTGGACTGCACTCATGTTCGCTGCCAGGACTGGACAGGACAAGGT
GGTCAGACTGCTGTTGGACCACGGGTAAATGTTAACTTTTTATATAGCAG
TCATTATCAGTAAGATTCAGTAACAGGGATGTAGGCAAAAGACTGAGTGG
ATTTTCTTAACTTCTATCTTGGCTTGAGACATCATGATTAGAGCACCCGG
TCTTAGTAGTAAAATACATTGTAAACCATTTTCAAGACAAAGGGACTACT
AGTAGAACTGTCATAGACTGTACGCTTGCTAGATCAATAGCTAGCATGCT
GAATATATCAACTACTCTCTAGTCTGACTAAATTGCACTCCGATAGCCCC
CTGCCCCTGCCAGCAAGAGATTGTGTAAACAGAGGCTAACTACTATACTA
GTATATGCAGAAGAAGGTCACAATTTTCCGAACCAACCTCTGCTTGTAGA
TTGGAATCAACAGTAAAGCAGGAAGACAGCATCTAATAGAAGATAGCAGC
CTTTGGGGTGTCTTTTCTCATATACCATATACTCTAATGGCGTTGTATTT
TGAATTTCAGAAAGTTTATGTATTTTTTCTTCTGTTTTAAGATGTGACAC
AACAGTGATGAACAAGTCGTGCCAGACAGCTGCAGACATCGCTGCATTTT
GGAACCACACGGCCGTTCTGACTGAGCTGGAGAAGAAAGGACAGACGTCT
GACAGTCAGCCACAAAACTTCTGTAACTACTTTGGCTACAACCCTCTGGA
TCGCTATGCACACAAGAGGAAGGATGAACAGTGGCTAGAGGAAAAACTCA
GGGATCAATCTACTGTTATCCTGCTGTTTCATGATCTTGGGCTTGTGGTG
ACCAAAGGTGAGAAGCTTGCTGCACAATCACGGGTCACTCAGCCATGCCA
TTTCACTTTCAACGACACCTCTGCATTGTTCGAGGAACTTGGAACAGAGA
AAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGACAAAACAGAT
GGANAACGACACCTCTGCATTGTTCGAGGAACTTGGAACAGAGAAAATTC
TCTTGTTCCTTGGACTGGGGAGGCTGCAACCTGACAAAACGGATGGACCA
AGTCCTCCTACAAGTGACAAGGAGGAGCATCTCCCTGCATGGTTTGCTCT
GGATGTCACATCGATTTCACAAGAGAAAATCCTTAGTATCAAAGAAGGAT
TGGAGATTGCCTCATCTCCCTTCCCAGGTCTGTTCCAACTACCTGAGAAA
GAGGCAGGGATCGTAGCCCAAGCGAGGTCCCTCCTAGCCTGGCACCAGCG
GTACAAGTTCTGCCCAACCTGCGGCAGCGCGGCTGCTGTGGAAGAAGCTG
GCTACAAGCGTAGATGTCAGAAGGAGGGGTGTCCGAGTTTGAAGGGCGTA
CACAACACCTCCTACCCCAGGACTGACCCTGTTGTCATCATGTTGATTGT
CTCCCAGGATGGGAAGAAGTGCTTGCTGGGAAGGGGCAAACGGTTCCCCG
GTAGGATGTACTCCTGTCTGGCTGGCTTTATGGAACCAGGTAAATTCTCG
TTCAATGAAGTTTTTTTTTAAAAGTTTCACATATAATCGAATTTGTTTTG
TGTGTGTAGGAACTTAAAAGACTATCAGGTTCATGTATATTGTCTGTTGA
GTGAGTCTGAAAAATAAGGTGCACAGAAAGAAATTTGGGTGCACCACATA
GAATAAAGTTGAATGTCAGCAAAACATAATTACAGTTTAATGCTCATATA
ATTGTAATTAAGAACTCCAATCTGTAATTCTATAGCTAACTTCGAATTTC
AAACAAGTAATGCATCAAAGAAAGTGCAACAAAGGGTTAGATTGCTTTTT
CTGATACTGCTTGCTAGTATACTCAATAATACCTTTACCCTTAAGCCTAC
AAAAATATCTAGGTGCACCAGTGCACCCACAGTCAAAAATTAGGTGCACA
GCTCCAATTTGGGGTGCACACAGGTGCACATGCACCCACTATTTCGAGCC
CTGAACAATATATTGTACAGTCATGTGTAATAGCTATAATGCTTTATGAT
TAACTGTGCCCAGAGATGTGGCTTTTAACCTACATGTGCACATTGCCCCC
TCCCTCCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAAGTTTACGAG
GAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAGCCAACCCTT
CCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACGCCACCTCAG
AAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAGTGGTTCACC
CGGCAGCAGGTAAAACACTCATACTTTCAGTTTCCATTATCACCAGGTTC
TCCCTGGCTCTCCCATAGAAATGAATAAAATCAAGATAAAATTTATGTTT
TGTACAAAGTGCACAAAGTATCTTGTTTACTCTGTTGACCATCGGTGTAC
ATCATCCTTGTACATTCAAACCTATTTAAGTGCCACCTCTTCATAAGAAC
CACCTGGCTGATGTGACAACTTTTTTTGTGGTCCCATTGAAGCATTAAGA
ATCCTATCTATATATAGTGACCACCTGTCCATATAGATCAGATTTTATTG
AGTGGTCTTCTTGGGCAGTTTTGACTGTACTTGAAAGGAAGAAAGAGGAT
ATAAATGAAATAAACTGTATGAATTTTCATGTATACCAAAGTCCCTTACC
CATTATATTTATGATGACACATCCCTATCTTGGTTAGCTTTAACATTTAC
AAGTTGATATATGAATGTGTCAAAAGGTGGCAGAAGTGCAGACCGGTGCC
CCCCTCCCCACGGATGCCCTGACTAACCCACGTGCTGAAGGCCCCAGTTT
CTTCCTGCCCCCAGCCCAGGCCATCGCACATCAGCTGGTTAAAGCATGGC
TCAGAATGTCACCTAACCTTTAAACAAAGCTAGAGGGAAGTGCATTCATT
GCACCCCCTATAGGCTTTATAATGTGACATGATGATGATGGTACAGATGT
TGATTAACATTGAAAGGAAAAATCTGAGAAGAGATGCCTTAGAAACCCTT
AGACAAAATTTTTATATGAAAGTATTTTTTGATATCAAGTACTTTATTTG
ATTTTCTACAGGAAAAGGTTATAGAAATGGAAGATGTTTTATGATAGAGA
AGTTGACTTTGAGTCCAAAAAATCAATGCCAAAATGATGAATTTTATATA
TTATTTAAGTGTAGACCACTACATACATTTGTAATGGGTTGGAGAGTAAG
TGTGCCATTGCTACAGGAAAAGTAGAAGATTTGTGGCAGCTTAACGAAAT
GTATCTAAAAACTTAATAAATGAAAAACCAGAGGACCACAAAAACCTCAA
ACCTAACCTCAATATAGCAGTGTTTCTGCTTTTAGGTGGTGATAAATAGA
AAGCAACCACAGGTAAATTGACTTTTTGGATGTCGGTTAAAATGTCTTAA
AATAGCATCAAGTGTTGTAATGTTCAATTGTTTTGTATCTTTTTTTAAAT
TATTTTGTCAGATATTACTTGAAGATTTGATAAAGAATTAATATAAAGAG
ATGTATAGTATCATAAATTGATGCAAATTCCACATGTTTAAACATTGTAA
TTTGTGTTGAAAGACAGGTAAATTAACTTGAGTGTGAGGTATTTCCTTGT
TGGTCAAAGACATTTTAACATTTGCTGTGCTTTGGTTTAGGCTAACTTTT
AGAGCATATAGCTTGTAGATGTTCATCTAATAAGCTCATTATAGATATGC
CAATGGTTCAGGATGGTTAACTCTGCCAAGACCTTTGTGTCTGAGTTTCT
GAGATGTAGATTGTAATGTTATAGGTGGAGATGTTTGTAGAATAATGGTT
GCCTAATGTGGACATTGAGATTTTCAAATAACTCTAAATTAGGTCCAACT
GAAAGGCATTTGGAGATTTAAGCAAAAAGGCTATTTTTTTATGAAATTTG
AAATTTGGCACAACATATTGATGACTGGAATATTAATTCTTGATAGGCAT
GTTTAACACCAAGTTTTGTTTAATTCGTTTTCTGAACAGTCTGCCTGTGT
TTATATGTCATTGAATATATTCAACACAAAAATAACAGATCACACAATAC
ACATATGCAATGCAGATGTAATTTATTTCCAGGACTAGAGCACTTCTGAC
AAACAGTAAACCAAGAAAGACCAGTCTTAATTGTATATATTACTAGCTGT
GACTAAAATCTTAAACACATGTGCTCAAATAAATTCATTCTCAACCTTTC
AGCAGACTTTGTATGTTATCCTTTCTTCAGATAAAGTTGTTCCACACTAG
AATCACAAAGTCAAGAAAACCCAACCTTTTGCTTCTAACACAAAATCATT
ATCGGAGTATACATAGTGTTTTCAAGGTCATTGTTCTTTCTTTGACAGTC
GTCAGTCTCACAGACATAAAATATGACATTGATGGTACCTTACCAGCTTC
TTTACCTGATTGGTCAAGGAGATGCCATATGACTAGAAAGCTAAACTGAA
TCCAAAGTGCAAAGTGGAAAAAACTAAAATGCTTGACTTGACAGAACATT
TCTCTTTATACTTACAAGATGATTATTGTCTAATGCCCAAAAAATAGAAG
GTTATAACAATAAGCATCAAAACGATACTACGTCAAAATGTCGTTAGAGT
CAGACTGTCCAATCAGAAAAGGTGGTTTAGGGAGTCTCGGGTTCGGTTCC
CCACTGCAGGCACTTGCTGATGTCACAAGTACACTCCAGAATGTAGTCAT
AGGAGTGCTGCTGGAGAGTTCCGTCCTCACACATCATGTCCACAGTTCGC
CGCTCGCTCTTGGAAGGCTGGCAGCACTGGCACTCATGGCTGTGGGGTAA
GGAAAAGGTGTTATGGAGCATGCCCACAGTTAAATTATCTACAGCCTGGT
TTCTATTAAAATGGCATGTTTTAACCTCCTTGCTGCCTAACACTGTA Coding sequence (CDS) from alignment at Sc0000078:973628..981124+ >Blg00444.0 ID=Blg00444.0|Name=Blg00444.0|organism=Branchiostoma lanceolatum|type=CDS|length=1407bp|location=Sequence derived from alignment at Sc0000078:973628..981124+ (Branchiostoma lanceolatum)
ATGGATGCAGACGGCCTCACGCCCCAGAAGCAGTTCCAAGAACACTTCTT
CACCTGTGCCAGCAGGGGTGATGTGAAGACCATAGAGGATGTGCTACAGC
AGGGCACGGTCAAGATAGATGCAACCAATGACCACGGCTGGACTGCACTC
ATGTTCGCTGCCAGGACTGGACAGGACAAGGTGGTCAGACTGCTGTTGGA
CCACGGATGTGACACAACAGTGATGAACAAGTCGTGCCAGACAGCTGCAG
ACATCGCTGCATTTTGGAACCACACGGCCGTTCTGACTGAGCTGGAGAAG
AAAGGACAGACGTCTGACAGTCAGCCACAAAACTTCTGTAACTACTTTGG
CTACAACCCTCTGGATCGCTATGCACACAAGAGGAAGGATGAACAGTGGC
TAGAGGAAAAACTCAGGGATCAATCTACTGTTATCCTGCTGTTTCATGAT
CTTGGGCTTGTGGTGACCAAAGGTGAGAAGCTTGCTGCACAATCACGGGT
CACTCAGCCATGCCATTTCACTTTCAACGACACCTCTGCATTGTTCGAGG
AACTTGGAACAGAGAAAATTCTCTTGTTCCTTGGACTGGGGAGGCTGCAA
CCTGACAAAACGGATGGACCAAGTCCTCCTACAAGTGACAAGGAGGAGCA
TCTCCCTGCATGGTTTGCTCTGGATGTCACATCGATTTCACAAGAGAAAA
TCCTTAGTATCAAAGAAGGATTGGAGATTGCCTCATCTCCCTTCCCAGGT
CTGTTCCAACTACCTGAGAAAGAGGCAGGGATCGTAGCCCAAGCGAGGTC
CCTCCTAGCCTGGCACCAGCGGTACAAGTTCTGCCCAACCTGCGGCAGCG
CGGCTGCTGTGGAAGAAGCTGGCTACAAGCGTAGATGTCAGAAGGAGGGG
TGTCCGAGTTTGAAGGGCGTACACAACACCTCCTACCCCAGGACTGACCC
TGTTGTCATCATGTTGATTGTCTCCCAGGATGGGAAGAAGTGCTTGCTGG
GAAGGGGCAAACGGTTCCCCGGTAGGATGTACTCCTGTCTGGCTGGCTTT
ATGGAACCAGGTGAGACCATAGAGGATGCCGTGCGTAGAGAAGTTTACGA
GGAGTCCGGAGTGAGAGTCGGGCGTGTGCAGTACCACTCCAGCCAACCCT
TCCCTCTCCCAGCCTCCCTGATGATCGGTTGCCTAGGTTACGCCACCTCA
GAAACCATCTCAGTGGACAAGGAGGAGTTGGAGGATGCACAGTGGTTCAC
CCGGCAGCAGGTGGCAGAAGTGCAGACCGGTGCCCCCCTCCCCACGGATG
CCCTGACTAACCCACGTGCTGAAGGCCCCAGTTTCTTCCTGCCCCCAGCC
CAGGCCATCGCACATCAGCTGGTTAAAGCATGGCTCAGAATGTCACCTAA
CCTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00444.0-exon-Sc0000078-1570713199:973628..973652 | Blg00444.0-exon-Sc0000078-1570713199:973628..973652 | Branchiostoma lanceolatum | exon |
| Blg00444.0-exon-Sc0000078-1570713199:974002..974505 | Blg00444.0-exon-Sc0000078-1570713199:974002..974505 | Branchiostoma lanceolatum | exon |
| Blg00444.0-exon-Sc0000078-1570713199:976044..976251 | Blg00444.0-exon-Sc0000078-1570713199:976044..976251 | Branchiostoma lanceolatum | exon |
| Blg00444.0-exon-Sc0000078-1570713199:976769..977155 | Blg00444.0-exon-Sc0000078-1570713199:976769..977155 | Branchiostoma lanceolatum | exon |
| Blg00444.0-exon-Sc0000078-1570713199:977250..977716 | Blg00444.0-exon-Sc0000078-1570713199:977250..977716 | Branchiostoma lanceolatum | exon |
| Blg00444.0-exon-Sc0000078-1570713199:978287..978486 | Blg00444.0-exon-Sc0000078-1570713199:978287..978486 | Branchiostoma lanceolatum | exon |
| Blg00444.0-exon-Sc0000078-1570713199:978954..981124 | Blg00444.0-exon-Sc0000078-1570713199:978954..981124 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000078 | genome | Sc0000078:973628..981124 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00444 |
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