|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:1051671..1056777+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00443.1 ID=Blg00443.1|Name=Blg00443.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5107bp|location=Sequence derived from alignment at Sc0000078:1051671..1056777+ (Branchiostoma lanceolatum)
CAAACATTGACTAAAAACCGGGAACACTGCCAAGTTCTGTTACAACAAAT
GCGACTAGGTGTCTGACCTTTAATCTTTGGCCTGGAATATCCCATTACGA
TTACAGGGTGTAGAAGGTTGTACTAAAGATTAATGGTTATAAATGCATGA
GTAGATTTTTACAACGTGAGCTTATCAATCTCAACAATCAACTATCATGA
CGTGATGTTTAAGATGGTTGTCAAAACATAGCAGCACTGTTGTGGTCGAT
ATTAAAAATCCCCATTCGATATTTGGGGTCACCTGAGGGTCACTCAGGGT
TCAGCTGCAGAAGCTCCGCAGAGTTGCGAAGAACAGTTTCCTGATGATCA
GGTGAGTACTTGGGGTGTGTGTAGACGTGCTTTGGAAACGAGGGGAAAGC
CGTTTTAAATGATAACCCTACACAAGTGCAGGCTTTTCCTCAACTCAAAT
GTTGTTGAAGTATAAGCTAGAGTTTTACTAGTATCATGTGTATCAAGGTA
TGTGATCATTGTGATGATCACGAAATTGTAAACTTCATTCATCACAAATC
TTAACATTCATGGGCTATATGGTGTCCTTGGTTCTACGTAAGTATTACGT
TTGATAGAGAGCATCTCGTGAGGAAGGGGCGGGGTCACTGTGTTACTTTT
TTAAGACTATAACTTATAAGGTGAATGTAACATTGCTGTTGAAAGAACAT
ACGTTCTCACGCTAATTGCAAGGGGGGAATTCATAAAACATTTGTAAGAT
TTGGACATGTTCACATTATATTGATAAAAGTTGAGAACGATTTGACATAG
CGGAACAAACAACAGGTACGGGTGTGTTCTATTTGAAGATAACACAGTTG
CATTTTGGACTTTAAGCCCTTTGGTCCCGTGCCTGTTTTGGTGTTTCGCC
ATATTTGTCATCATGATCAAGCCATATTCTCTGTAAAGCATGTCAATCCA
GCGAATGGTCTTTTGAAGTTAGACTGCACCGAATCTACTGCAAAATGGTT
ATCGCACGGCCGATAAACGTGTCTGCATATGTTTGGGGAACAAAGTGATT
TTGTGTATAGAAACATACCTCCGGGAGTCCAGGTATCCTTGCTTGCGCAG
TGGCGGTGATGGTCAGTGTTTCGAGCACCAGGGCTGCGCATGTGAGTGGG
TCGTGAGAGAAAAGGGCCGGAATTTCCCTCGGTTATATTTTTCTTAAGAT
GAGCATTGTGTTTCATATCATTGGAAAGCTTGTCTATTGCCTTTCAAAAT
TATATCCTGTTTGTGATGCTTTTAAAGTTTCATGCGATGAGCACCATGAA
TTTCCCTGACAATGTTGGACACTGTGTTGCCAGTGAAATTTCGACACTTC
TGTTTTTGTTACCCACTCACATAGTCAGCCGTTGTACTTGAACCATGGAT
TTGAAGGAATGGAATTGATTAAGTGACAACGGAAATATGATCAACTGAAG
TCAAGTTTCCAATCTTTTTGTGTTAGGTTTAGGTGTACTTTTATCGACTC
TCCAGTTGGATTGACTGATTGTCTTCCCATGTTATTATGAATTGCAGAGT
AAGGCGCCATCCATAATGGCAGCGGAAGAAACGGACTTCAGCGTTATTGG
CTACGCCACTTTCCTTCATAAGAGTAGAGAACTGAGGCTTTACCAGAGAG
GACGTCTCGTCTTGCAGGGTGCACTATGTACAGAGATAACAGCCAATCAG
TTACCACGGATGAAAAAGCCGCGCAAGTCAGGTGAAGACGGTTTCCAGTG
GCAGTGCGCAGGTCTCAACATTCGGCACGAGCAACATGATGATGACGTCG
ACACGTACAGAATCAGGTGGAGTAGTACCACGGATCCAGACTTCCGGCTA
CGGGACGAGTTTGAGATGGCGGGGGGTCACTGGTACGGCTGTGGCACCGT
GCACCAACAGCTCTGGCCCATCGAGAAATGGCAAAGAGACATCTCCCCTT
TCGTTTCACCTTTTGGTTACATGATTGAACGATATTGGTTATCGTCGTTG
GGCGTGGCAATAGTGGTTGGCAACGAGGTGCCATTGTTTGTAGGTATGAA
CAGTAATGGTAACGGGAAGTTGTCGTTCTTGGCGCAGTTCAATGATTCCC
CGTACAATAATCCTAAAGGGCGCAGGCCTTCCCTAGAGTACACCATCATC
GCGGGCCCTAGTCCATTGGTTGTGCACAAGTTCGTCATGAAGAAGTTCTT
CTCTCTTCCTCGTGGCGTCCCAGATGAGCGCATGTTCCGTTCGCCCGTGT
GGTCCACCTGGGCGCGCTACAAGGTCCACGTCAGCCAGGGTAAGGTGCTC
GACTACGCCAGGGAGATTTCTTCCCACGGATTCAACAACAGCCAGATAGA
GATTGACGACGACTTCACAACAAAGTACGGTGATTTCAGGTTCAACCTGG
ACAAGTTTCCTGACGCTAAGGGGATGGTAGACCAACTCAAGGCTGAAGAC
TTCCGCGTCACTTTGTGGGTTCATCCTTTCTCAAACTTGGACTCGCAGTC
TTTCGCAGAAGGTTGTGAGAAGGGATACTTCCTGGGTTCTCACGATGAGG
CAGACGGCGGAGTGAAAGCCGCGGAGTGGTGGAATGGATCGGGAGCGGTA
GTCGACGTGACCAATCCAAAAGCGCGGGAATGGTACTGTGGCCGCCTTCA
CGACCTACAGCAAGAATCCGGTATCGACTCCTACAAGTTTGATGCTGGGG
AGAACCTGTACCTACCGCCACACCTGTCAGCACACCAGCCCATGGTCAAC
CCTTCAGACTTCACCACAAAGTACGTCCAGACGGTCGCTTCATTCGGGCC
CATGGTAGAAGTGCGTGTAGGCTACCGCAACCAAGATCTGCCCATATTCG
TCCGTATGATGGACAAGGACTCGAACTGGGGCTACAACAACGGCCTGCGG
ACCATCATCCCCTCCGCTCTGACGCTTGGTATCCTGGGATATCCCTACAT
CCTCCCTGACATGATTGGCGGGAACGCGTACGAGGCAGGCTTCCACGAGA
CGCGGCTCCCCGATAGGGAGTTGTACATCCGTTGGGTGCAACTCACTGCA
TTCCTGCCGGCTATGCAGTTCTCCATCGCCCCGTGGCAATACGACGAAGA
AGTCGTCCAAATCTCGAAGCGGTACGTCGAACTACACGAGACCTTCGTGA
CGCCCGTCGTTCTGAAGTTCGCAGAGGAGGCGCTGAAAGACGCAAGCCCG
ATCATACGGCCTCTGTGGTGGCTGGCTCCGGGAGACGAACTGTCACAGAT
CGAAGACTCGGAGTTCTTGATCGGAGACGAGGTTCTTGTGGCACCAATAT
TAGACCAAGGAAGGACCTTCCGTGACGTGTACCTGCCGCCTGGCGGAACG
TGGCGGGATTGCAGGAACGGCTCCGTCTATGATGGAGGGCAGACATTGAA
AGACGTCCCTGTGCCTCTTGGAGATGTGGCATACTACACAATGTTGTGAG
AATATTGGAAATTTGGGATACACAAACATACTGTGTATAGTGTACATTGA
GCTCCAACAATGAGCTCTGATTATTGTTTCTAAACGGCTTTGAGTAAGAC
GGCCTACATGTATACATGTACACAGCTGGTATGTTGCGGCNCGGCCTACA
TGTATACATGTACACAGCTGGTAACGTTATGTTGCGGCGAAGAGCGGTTA
TACCGGCTATATAGATACAGATACATGTCTTAGACTTGAGAAGGTAACAG
ATTACATATCAACAGCTTGTGCGAGTGCTTTCCTGCAACTTTATTTTAAG
GTTTTATTATATTGTTATTTTCGGAAATCTACTCCTTGGCACCCCTGTGA
TCCAAAATATCATTATTGTTTTAGAAAAAAATCATATGCAATAATAGAAA
GTCCAACAACTTAAAATTGGAATCATTTCTTTTATGTGCTTATTTCTTTA
ATCGAGTCGAATATCATATTGCGGTTAGAAAAGGGAAATTGGAGAAACAC
CGGGGTATATGTGGCACATGATGTATTTGATGGATTATTACGTGCGTTTC
TGTTGATAAGCCGATCCTTATTCATATGTGCAAATGATTACTTATATTAT
GCTTTGATTTCTGCTGGATGGTTTTGTGTCTTTTGTTGGTTCATGTAAGA
AAAATGAAATAAATAAAAAACTTTATGTTAAGGCTTAATTGTATTTAGTG
TTGGACTCAATATTTGCCGCAGTAGAGCTGTTTTGAGAATGAACCAGGAC
AGGGTCTTGTGTAGTTAAGCCTTCTGGGGGTACTGACAGAATTATCTACA
GAGCTGCTGCTGGATAAAGAATCATTGCTGGTTAAAGGCATCCAGAGCAT
TTTATGAGGCTTGAAACTTGAAAACTCGAATTTCTAGTCATTCCTACACA
TAGCAAGGTTCAATAACACTATACCATTGCATATATAAATTAAATGAGCA
AAGATACGATGTCTTTGTGTGGTGAAAACTGATAGAAAATCTAAGCCCTA
ATAGACTGATACTTACTGTCCATCACAATTAGAGGTTCGACCAATGTGAG
AGTGACTGCATGTCCGTCAAATATTTGCATTTGTATGTTTTAATTTTGCA
TTTCTATGTTTTGACGGAGGTGGGCGGGACTATGGTATCTACAGTATTTA
CAGTAGGCGCGTGAAACGAAAAGATCACCATGTAGATTATTTTTGTGCCT
TTTTGCGCACTTTTGATAAGAAATCCGAACGCAAATGTGATTAACAGTGT
CAACAGAATACAGCAACCAAAATATTTCCAGTTTTCATGTCTCATAAAAT
GCGCTGGGTGCCTTTAAGCCTTCAAAGAATGGTCATTTAATTTAACATGG
TCATTACTAAACGCAACGGATAAATTCATATTTTTGTTGCGCCTAGACAA
TTACAACCCTTGTATAAGAAACATGATCTGTTCATACATCTACACAAGTA
CAAAAAAGTGAGAAGAAGTTGACTGTACTGGATTAGCTTAGCTTATCATT
TTCGTTTGCCATGTATGTCTTAACTATGTACTGTATATATAGCAGTATCC
TTTATATGTTTCACCGTATATGTCACTTACTTGTTAGTTAAGTTTATGTT
AGACGACCTGTATCTAGCCCCTCGGGGCACGAATGTACAATAAAGGTCTT
CATTCAT Coding sequence (CDS) from alignment at Sc0000078:1051671..1056777+ >Blg00443.1 ID=Blg00443.1|Name=Blg00443.1|organism=Branchiostoma lanceolatum|type=CDS|length=1884bp|location=Sequence derived from alignment at Sc0000078:1051671..1056777+ (Branchiostoma lanceolatum)
ATGGCAGCGGAAGAAACGGACTTCAGCGTTATTGGCTACGCCACTTTCCT
TCATAAGAGTAGAGAACTGAGGCTTTACCAGAGAGGACGTCTCGTCTTGC
AGGGTGCACTATGTACAGAGATAACAGCCAATCAGTTACCACGGATGAAA
AAGCCGCGCAAGTCAGGTGAAGACGGTTTCCAGTGGCAGTGCGCAGGTCT
CAACATTCGGCACGAGCAACATGATGATGACGTCGACACGTACAGAATCA
GGTGGAGTAGTACCACGGATCCAGACTTCCGGCTACGGGACGAGTTTGAG
ATGGCGGGGGGTCACTGGTACGGCTGTGGCACCGTGCACCAACAGCTCTG
GCCCATCGAGAAATGGCAAAGAGACATCTCCCCTTTCGTTTCACCTTTTG
GTTACATGATTGAACGATATTGGTTATCGTCGTTGGGCGTGGCAATAGTG
GTTGGCAACGAGGTGCCATTGTTTGTAGGTATGAACAGTAATGGTAACGG
GAAGTTGTCGTTCTTGGCGCAGTTCAATGATTCCCCGTACAATAATCCTA
AAGGGCGCAGGCCTTCCCTAGAGTACACCATCATCGCGGGCCCTAGTCCA
TTGGTTGTGCACAAGTTCGTCATGAAGAAGTTCTTCTCTCTTCCTCGTGG
CGTCCCAGATGAGCGCATGTTCCGTTCGCCCGTGTGGTCCACCTGGGCGC
GCTACAAGGTCCACGTCAGCCAGGGTAAGGTGCTCGACTACGCCAGGGAG
ATTTCTTCCCACGGATTCAACAACAGCCAGATAGAGATTGACGACGACTT
CACAACAAAGTACGGTGATTTCAGGTTCAACCTGGACAAGTTTCCTGACG
CTAAGGGGATGGTAGACCAACTCAAGGCTGAAGACTTCCGCGTCACTTTG
TGGGTTCATCCTTTCTCAAACTTGGACTCGCAGTCTTTCGCAGAAGGTTG
TGAGAAGGGATACTTCCTGGGTTCTCACGATGAGGCAGACGGCGGAGTGA
AAGCCGCGGAGTGGTGGAATGGATCGGGAGCGGTAGTCGACGTGACCAAT
CCAAAAGCGCGGGAATGGTACTGTGGCCGCCTTCACGACCTACAGCAAGA
ATCCGGTATCGACTCCTACAAGTTTGATGCTGGGGAGAACCTGTACCTAC
CGCCACACCTGTCAGCACACCAGCCCATGGTCAACCCTTCAGACTTCACC
ACAAAGTACGTCCAGACGGTCGCTTCATTCGGGCCCATGGTAGAAGTGCG
TGTAGGCTACCGCAACCAAGATCTGCCCATATTCGTCCGTATGATGGACA
AGGACTCGAACTGGGGCTACAACAACGGCCTGCGGACCATCATCCCCTCC
GCTCTGACGCTTGGTATCCTGGGATATCCCTACATCCTCCCTGACATGAT
TGGCGGGAACGCGTACGAGGCAGGCTTCCACGAGACGCGGCTCCCCGATA
GGGAGTTGTACATCCGTTGGGTGCAACTCACTGCATTCCTGCCGGCTATG
CAGTTCTCCATCGCCCCGTGGCAATACGACGAAGAAGTCGTCCAAATCTC
GAAGCGGTACGTCGAACTACACGAGACCTTCGTGACGCCCGTCGTTCTGA
AGTTCGCAGAGGAGGCGCTGAAAGACGCAAGCCCGATCATACGGCCTCTG
TGGTGGCTGGCTCCGGGAGACGAACTGTCACAGATCGAAGACTCGGAGTT
CTTGATCGGAGACGAGGTTCTTGTGGCACCAATATTAGACCAAGGAAGGA
CCTTCCGTGACGTGTACCTGCCGCCTGGCGGAACGTGGCGGGATTGCAGG
AACGGCTCCGTCTATGATGGAGGGCAGACATTGAAAGACGTCCCTGTGCC
TCTTGGAGATGTGGCATACTACACAATGTTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00443.1-exon-Sc0000078-1570713199:1051671..1052021 | Blg00443.1-exon-Sc0000078-1570713199:1051671..1052021 | Branchiostoma lanceolatum | exon |
| Blg00443.1-exon-Sc0000078-1570713199:1053218..1056777 | Blg00443.1-exon-Sc0000078-1570713199:1053218..1056777 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000078 | genome | Sc0000078:1051671..1056777 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00443 |
|
