Blg00443.0 (mRNA) - B. lanceolatum

Overview
NameBlg00443.0
Unique NameBlg00443.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:1051489..1055337+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00443.0 ID=Blg00443.0|Name=Blg00443.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3849bp|location=Sequence derived from alignment at Sc0000078:1051489..1055337+ (Branchiostoma lanceolatum)
AGGATCTCGTCCCCGATGATAATGACTCCGGCCGTGGTGTGGTGCCGGAC CAGGCTGTTCGTGGGGGCCGCCATGACGACAGAACTCGTGCGAAGGTGAC TCCAGACGACTCCGATACGGAACAAGGCGCGCCCGGACACCAGCGGGAGA AGGTTGGACATAAATCGCTACGCTGATTTCATCAAACATTGACTAAAAAC CGGGAACACTGCCAAGTTCTGTTACAACAAATGCGACTAGGTGTCTGACC TTTAATCTTTGGCCTGGAATATCCCATTACGATTACAGGGTGTAGAAGGT TGTACTAAAGATTAATGGTTATAAATGCATGAGTAGATTTTTACAACGTG AGCTTATCAATCTCAACAATCAACTATCATGACGTGATGTTTAAGATGGT TGTCAAAACATAGCAGCACTGTTGTGGTCGATATTAAAAATCCCCATTCG ATATTTGGGGTCACCTGAGGGTCACTCAGGGTTCAGCTGCAGAAGCTCCG CAGAGTTGCGAAGAACAGTTTCCTGATGATCAGGTGAGTACTTGGGGTGT GTGTAGACGTGCTTTGGAAACGAGGGGAAAGCCGTTTTAAATGATAACCC TACACAAGTGCAGGCTTTTCCTCAACTCAAATGTTGTTGAAGTATAAGCT AGAGTTTTACTAGTATCATGTGTATCAAGGTATGTGATCATTGTGATGAT CACGAAATTGTAAACTTCATTCATCACAAATCTTAACATTCATGGGCTAT ATGGTGTCCTTGGTTCTACGTAAGTATTACGTTTGATAGAGAGCATCTCG TGAGGAAGGGGCGGGGTCACTGTGTTACTTTTTTAAGACTATAACTTATA AGGTGAATGTAACATTGCTGTTGAAAGAACATACGTTCTCACGCTAATTG CAAGGGGGGAATTCATAAAACATTTGTAAGATTTGGACATGTTCACATTA TATTGATAAAAGTTGAGAACGATTTGACATAGCGGAACAAACAACAGGTA CGGGTGTGTTCTATTTGAAGATAACACAGTTGCATTTTGGACTTTAAGCC CTTTGGTCCCGTGCCTGTTTTGGTGTTTCGCCATATTTGTCATCATGATC AAGCCATATTCTCTGTAAAGCATGTCAATCCAGCGAATGGTCTTTTGAAG TTAGACTGCACCGAATCTACTGCAAAATGGTTATCGCACGGCCGATAAAC GTGTCTGCATATGTTTGGGGAACAAAGTGATTTTGTGTATAGAAACATAC CTCCGGGAGTCCAGGTATCCTTGCTTGCGCAGTGGCGGTGATGGTCAGTG TTTCGAGCACCAGGGCTGCGCATGTGAGTGGGTCGTGAGAGAAAAGGGCC GGAATTTCCCTCGGTTATATTTTTCTTAAGATGAGCATTGTGTTTCATAT CATTGGAAAGCTTGTCTATTGCCTTTCAAAATTATATCCTGTTTGTGATG CTTTTAAAGTTTCATGCGATGAGCACCATGAATTTCCCTGACAATGTTGG ACACTGTGTTGCCAGTGAAATTTCGACACTTCTGTTTTTGTTACCCACTC ACATAGTCAGCCGTTGTACTTGAACCATGGATTTGAAGGAATGGAATTGA TTAAGTGACAACGGAAATATGATCAACTGAAGTCAAGTTTCCAATCTTTT TGTGTTAGGTTTAGGTGTACTTTTATCGACTCTCCAGTTGGATTGACTGA TTGTCTTCCCATGTTATTATGAATTGCAGAGTAAGGCGCCATCCATAATG GCAGCGGAAGAAACGGACTTCAGCGTTATTGGCTACGCCACTTTCCTTCA TAAGAGTAGAGAACTGAGGCTTTACCAGAGAGGACGTCTCGTCTTGCAGG GTGCACTATGTACAGAGATAACAGCCAATCAGTTACCACGGATGAAAAAG CCGCGCAAGTCAGGTGAAGACGGTTTCCAGTGGCAGTGCGCAGGTCTCAA CATTCGGCACGAGCAACATGATGATGACGTCGACACGTACAGAATCAGGT GGAGTAGTACCACGGATCCAGACTTCCGGCTACGGGACGAGTTTGAGATG GCGGGGGGTCACTGGTACGGCTGTGGCACCGTGCACCAACAGCTCTGGCC CATCGAGAAATGGCAAAGAGACATCTCCCCTTTCGTTTCACCTTTTGGTT ACATGATTGAACGATATTGGTTATCGTCGTTGGGCGTGGCAATAGTGGTT GGCAACGAGGTGCCATTGTTTGTAGGTATGAACAGTAATGGTAACGGGAA GTTGTCGTTCTTGGCGCAGTTCAATGATTCCCCGTACAATAATCCTAAAG GGCGCAGGCCTTCCCTAGAGTACACCATCATCGCGGGCCCTAGTCCATTG GTTGTGCACAAGTTCGTCATGAAGAAGTTCTTCTCTCTTCCTCGTGGCGT CCCAGATGAGCGCATGTTCCGTTCGCCCGTGTGGTCCACCTGGGCGCGCT ACAAGGTCCACGTCAGCCAGGGTAAGGTGCTCGACTACGCCAGGGAGATT TCTTCCCACGGATTCAACAACAGCCAGATAGAGATTGACGACGACTTCAC AACAAAGTACGGTGATTTCAGGTTCAACCTGGACAAGTTTCCTGACGCTA AGGGGATGGTAGACCAACTCAAGGCTGAAGACTTCCGCGTCACTTTGTGG GTTCATCCTTTCTCAAACTTGGACTCGCAGTCTTTCGCAGAAGGTTGTGA GAAGGGATACTTCCTGGGTTCTCACGATGAGGCAGACGGCGGAGTGAAAG CCGCGGAGTGGTGGAATGGATCGGGAGCGGTAGTCGACGTGACCAATCCA AAAGCGCGGGAATGGTACTGTGGCCGCCTTCACGACCTACAGCAAGAATC CGGTATCGACTCCTACAAGTTTGATGCTGGGGAGAACCTGTACCTACCGC CACACCTGTCAGCACACCAGCCCATGGTCAACCCTTCAGACTTCACCACA AAGTACGTCCAGACGGTCGCTTCATTCGGGCCCATGGTAGAAGTGCGTGT AGGCTACCGCAACCAAGATCTGCCCATATTCGTCCGTATGATGGACAAGG ACTCGAACTGGGGCTACAACAACGGCCTGCGGACCATCATCCCCTCCGCT CTGACGCTTGGTATCCTGGGATATCCCTACATCCTCCCTGACATGATTGG CGGGAACGCGTACGAGGCAGGCTTCCACGAGACGCGGCTCCCCGATAGGG AGTTGTACATCCGTTGGGTGCAACTCACTGCATTCCTGCCGGCTATGCAG TTCTCCATCGCCCCGTGGCAATACGACGAAGAAGTCGTCCAAATCTCGAA GCGGTACGTCGAACTACACGAGACCTTCGTGACGCCCGTCGTTCTGAAGT TCGCAGAGGAGGCGCTGAAAGACGCAAGCCCGATCATACGGCCTCTGTGG TGGCTGGCTCCGGGAGACGAACTGTCACAGATCGAAGACTCGGAGTTCTT GATCGGAGACGAGGTTCTTGTGGCACCAATATTAGACCAAGGAAGGACCT TCCGTGACGTGTACCTGCCGCCTGGCGGAACGTGGCGGGATTGCAGGAAC GGCTCCGTCTATGATGGAGGGCAGACATTGAAAGACGTCCCTGTGCCTCT TGGAGATGTGGCATACTACACAATGTTGTGAGAATATTGGAAATTTGGGA TACACAAACATACTGTGTATAGTGTACATTGAGCTCCAACAATGAGCTCT GATTATTGTTTCTAAACGGCTTTGAGTAAGACGGCCTACATGTATACATG TACACAGCTGGTATGTTGCGGCNCGGCCTACATGTATACATGTACACAGC TGGTAACGTTATGTTGCGGCGAAGAGCGGTTATACCGGCTATATAGATA

Coding sequence (CDS) from alignment at Sc0000078:1051489..1055337+

>Blg00443.0 ID=Blg00443.0|Name=Blg00443.0|organism=Branchiostoma lanceolatum|type=CDS|length=1884bp|location=Sequence derived from alignment at Sc0000078:1051489..1055337+ (Branchiostoma lanceolatum)
ATGGCAGCGGAAGAAACGGACTTCAGCGTTATTGGCTACGCCACTTTCCT
TCATAAGAGTAGAGAACTGAGGCTTTACCAGAGAGGACGTCTCGTCTTGC
AGGGTGCACTATGTACAGAGATAACAGCCAATCAGTTACCACGGATGAAA
AAGCCGCGCAAGTCAGGTGAAGACGGTTTCCAGTGGCAGTGCGCAGGTCT
CAACATTCGGCACGAGCAACATGATGATGACGTCGACACGTACAGAATCA
GGTGGAGTAGTACCACGGATCCAGACTTCCGGCTACGGGACGAGTTTGAG
ATGGCGGGGGGTCACTGGTACGGCTGTGGCACCGTGCACCAACAGCTCTG
GCCCATCGAGAAATGGCAAAGAGACATCTCCCCTTTCGTTTCACCTTTTG
GTTACATGATTGAACGATATTGGTTATCGTCGTTGGGCGTGGCAATAGTG
GTTGGCAACGAGGTGCCATTGTTTGTAGGTATGAACAGTAATGGTAACGG
GAAGTTGTCGTTCTTGGCGCAGTTCAATGATTCCCCGTACAATAATCCTA
AAGGGCGCAGGCCTTCCCTAGAGTACACCATCATCGCGGGCCCTAGTCCA
TTGGTTGTGCACAAGTTCGTCATGAAGAAGTTCTTCTCTCTTCCTCGTGG
CGTCCCAGATGAGCGCATGTTCCGTTCGCCCGTGTGGTCCACCTGGGCGC
GCTACAAGGTCCACGTCAGCCAGGGTAAGGTGCTCGACTACGCCAGGGAG
ATTTCTTCCCACGGATTCAACAACAGCCAGATAGAGATTGACGACGACTT
CACAACAAAGTACGGTGATTTCAGGTTCAACCTGGACAAGTTTCCTGACG
CTAAGGGGATGGTAGACCAACTCAAGGCTGAAGACTTCCGCGTCACTTTG
TGGGTTCATCCTTTCTCAAACTTGGACTCGCAGTCTTTCGCAGAAGGTTG
TGAGAAGGGATACTTCCTGGGTTCTCACGATGAGGCAGACGGCGGAGTGA
AAGCCGCGGAGTGGTGGAATGGATCGGGAGCGGTAGTCGACGTGACCAAT
CCAAAAGCGCGGGAATGGTACTGTGGCCGCCTTCACGACCTACAGCAAGA
ATCCGGTATCGACTCCTACAAGTTTGATGCTGGGGAGAACCTGTACCTAC
CGCCACACCTGTCAGCACACCAGCCCATGGTCAACCCTTCAGACTTCACC
ACAAAGTACGTCCAGACGGTCGCTTCATTCGGGCCCATGGTAGAAGTGCG
TGTAGGCTACCGCAACCAAGATCTGCCCATATTCGTCCGTATGATGGACA
AGGACTCGAACTGGGGCTACAACAACGGCCTGCGGACCATCATCCCCTCC
GCTCTGACGCTTGGTATCCTGGGATATCCCTACATCCTCCCTGACATGAT
TGGCGGGAACGCGTACGAGGCAGGCTTCCACGAGACGCGGCTCCCCGATA
GGGAGTTGTACATCCGTTGGGTGCAACTCACTGCATTCCTGCCGGCTATG
CAGTTCTCCATCGCCCCGTGGCAATACGACGAAGAAGTCGTCCAAATCTC
GAAGCGGTACGTCGAACTACACGAGACCTTCGTGACGCCCGTCGTTCTGA
AGTTCGCAGAGGAGGCGCTGAAAGACGCAAGCCCGATCATACGGCCTCTG
TGGTGGCTGGCTCCGGGAGACGAACTGTCACAGATCGAAGACTCGGAGTT
CTTGATCGGAGACGAGGTTCTTGTGGCACCAATATTAGACCAAGGAAGGA
CCTTCCGTGACGTGTACCTGCCGCCTGGCGGAACGTGGCGGGATTGCAGG
AACGGCTCCGTCTATGATGGAGGGCAGACATTGAAAGACGTCCCTGTGCC
TCTTGGAGATGTGGCATACTACACAATGTTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00443.0-exon-Sc0000078-1570713199:1051489..1051583Blg00443.0-exon-Sc0000078-1570713199:1051489..1051583Branchiostoma lanceolatumexon
Blg00443.0-exon-Sc0000078-1570713199:1053218..1055337Blg00443.0-exon-Sc0000078-1570713199:1053218..1055337Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00443.0Blg00443.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:1051489..1055337 +
Properties
Property NameValue
GeneIDBlg00443