Blg00440.0 (mRNA) - B. lanceolatum

Overview
NameBlg00440.0
Unique NameBlg00440.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:46900..48495+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00440.0 ID=Blg00440.0|Name=Blg00440.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1596bp|location=Sequence derived from alignment at Sc0000078:46900..48495+ (Branchiostoma lanceolatum)
ATGAGGAAAACTAACTGTTCCATAGTGATCCCTGGGATGGAAGCAGACGA CACTAGTACTGCTAATTCAATCAACAACAAGTTTTCCGAGGTGTCCAATG CCCTCCCTCGGCTAGACACTTCCTTGCTGCCGTCCTTCCTACCTTCTCCT CAACAGCTACCCACACTCCAGGTCTGGGAGGTATACCAACGCCTCCGGGC TGTCAAGGTCAACAAAGCCCCTGGCCCTGATAACATCCCTCTCAAGCTGT TAAAGGAGTTCGCCTGTGAGCTCAGCACGCCTTTTTGTCATATCCTCAAT GCCTCCTTTGCCACCGGCACAGTCCCCAACCAGTGGAAAGAGGCAATTGT TGTGCCCGTTCCAAAATCTCAGCCAGCAAGCATTGAACAGCTCAGACCAA TCTCACTAACCTGCCAATTTGCAAAGATTGCTGAGTTCTTTGCTTGCGAG TGGATCTCGAAAGACATTCACTTGGACACAAGGCAATTCGGCAGCCTTAA AGGCCGTTCTACCGTCCACGCGCTCGTAAGTCTGGTTGACAGACTATGCC GGGGCGCGGACAACCCTGGAACCATCAGTACCATCGTGGCCACGGACTTC TCGAAGGCCTTCGACCGAGTCCATCACAATACTGTGATAGCCAAGCTACT AGACAAGGGACTGAGACCAGAGCTAGTACCGTGGGTCTGCGACTTCATTA CTGCAAGAAAACAGCGTGTTAGGTACAGAGGATCACTCTCCAACTGGCAG ACGCTCACATGTGGAGTTGCTCAAGGCACTTTACTTGGCCCAATCCTTTT CCTGGTCCTGATAGATGACGCTGCAACTGGCGCACTCAGTTTTGCTTTGA AATATTTAGATGATATGAACTTCCTGGAAACAAGAACGCTCCATGTCCCC TCCTGTCTGCAAAATGACCTAGACGAGCTAAACTCTTGGACAAGGAAAAA CCACATGCTTTTGAATGGTACCAAGTGTCTAGCAATGCACATTACGTTCT GCAGGAACCCGCCACCGTTCCCTACATTGCAAATCGACTCCTCAACTCTG TCTGCTGTGCCTTGTTTAAAAATACTTGGTCTCCGCATTCAGAAAGACCT ACGTTGGAATGAGCAAGTCAGTTACATGTCAGCGCAAGCCGCAAGAAAAC TTTTCATTCTCAAGCGACTCAGAAAGTTCAACCTCTCACCTAAAGAACTA CTTACCATCTATATAGGGTACATCAGACCCCTCCTCGAATACGCTGTCCC CATTTGGAATCCCGGACTTACACATCGCCAAAGGGACCAGCTGGAGAGAA TTCAGAGAAGAGCCTGCCGCATCATCCTCGGCAGAGACTACCCTGGATAT GCGGAGGCACTGACTCAGCTGGGACTCACCACCCTGTCTGAAAGGCGCGA GGGACTGTGTTTGAAGTTTGGCAGATCCCTGCTAGGTTCCGAATTCGAAC ACTGGTTGCCTTGTAGAAGATCTGAAATCTCGGGTAGACGCACTCGTAAT GGGCACAAACTGAACATTCCTAGGGCAAATACACTGAGATTCAGTAACTC GCCGATTCCGTACCTCACGAAATTGCTTAACCAGTATGGTTGCTGA

Coding sequence (CDS) from alignment at Sc0000078:46900..48495+

>Blg00440.0 ID=Blg00440.0|Name=Blg00440.0|organism=Branchiostoma lanceolatum|type=CDS|length=1596bp|location=Sequence derived from alignment at Sc0000078:46900..48495+ (Branchiostoma lanceolatum)
ATGAGGAAAACTAACTGTTCCATAGTGATCCCTGGGATGGAAGCAGACGA
CACTAGTACTGCTAATTCAATCAACAACAAGTTTTCCGAGGTGTCCAATG
CCCTCCCTCGGCTAGACACTTCCTTGCTGCCGTCCTTCCTACCTTCTCCT
CAACAGCTACCCACACTCCAGGTCTGGGAGGTATACCAACGCCTCCGGGC
TGTCAAGGTCAACAAAGCCCCTGGCCCTGATAACATCCCTCTCAAGCTGT
TAAAGGAGTTCGCCTGTGAGCTCAGCACGCCTTTTTGTCATATCCTCAAT
GCCTCCTTTGCCACCGGCACAGTCCCCAACCAGTGGAAAGAGGCAATTGT
TGTGCCCGTTCCAAAATCTCAGCCAGCAAGCATTGAACAGCTCAGACCAA
TCTCACTAACCTGCCAATTTGCAAAGATTGCTGAGTTCTTTGCTTGCGAG
TGGATCTCGAAAGACATTCACTTGGACACAAGGCAATTCGGCAGCCTTAA
AGGCCGTTCTACCGTCCACGCGCTCGTAAGTCTGGTTGACAGACTATGCC
GGGGCGCGGACAACCCTGGAACCATCAGTACCATCGTGGCCACGGACTTC
TCGAAGGCCTTCGACCGAGTCCATCACAATACTGTGATAGCCAAGCTACT
AGACAAGGGACTGAGACCAGAGCTAGTACCGTGGGTCTGCGACTTCATTA
CTGCAAGAAAACAGCGTGTTAGGTACAGAGGATCACTCTCCAACTGGCAG
ACGCTCACATGTGGAGTTGCTCAAGGCACTTTACTTGGCCCAATCCTTTT
CCTGGTCCTGATAGATGACGCTGCAACTGGCGCACTCAGTTTTGCTTTGA
AATATTTAGATGATATGAACTTCCTGGAAACAAGAACGCTCCATGTCCCC
TCCTGTCTGCAAAATGACCTAGACGAGCTAAACTCTTGGACAAGGAAAAA
CCACATGCTTTTGAATGGTACCAAGTGTCTAGCAATGCACATTACGTTCT
GCAGGAACCCGCCACCGTTCCCTACATTGCAAATCGACTCCTCAACTCTG
TCTGCTGTGCCTTGTTTAAAAATACTTGGTCTCCGCATTCAGAAAGACCT
ACGTTGGAATGAGCAAGTCAGTTACATGTCAGCGCAAGCCGCAAGAAAAC
TTTTCATTCTCAAGCGACTCAGAAAGTTCAACCTCTCACCTAAAGAACTA
CTTACCATCTATATAGGGTACATCAGACCCCTCCTCGAATACGCTGTCCC
CATTTGGAATCCCGGACTTACACATCGCCAAAGGGACCAGCTGGAGAGAA
TTCAGAGAAGAGCCTGCCGCATCATCCTCGGCAGAGACTACCCTGGATAT
GCGGAGGCACTGACTCAGCTGGGACTCACCACCCTGTCTGAAAGGCGCGA
GGGACTGTGTTTGAAGTTTGGCAGATCCCTGCTAGGTTCCGAATTCGAAC
ACTGGTTGCCTTGTAGAAGATCTGAAATCTCGGGTAGACGCACTCGTAAT
GGGCACAAACTGAACATTCCTAGGGCAAATACACTGAGATTCAGTAACTC
GCCGATTCCGTACCTCACGAAATTGCTTAACCAGTATGGTTGCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00440.0-exon-Sc0000078-1570713199:46900..48495Blg00440.0-exon-Sc0000078-1570713199:46900..48495Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00440.0Blg00440.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:46900..48495 +
Properties
Property NameValue
GeneIDBlg00440