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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:622350..628975+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00439.0 ID=Blg00439.0|Name=Blg00439.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6626bp|location=Sequence derived from alignment at Sc0000078:622350..628975+ (Branchiostoma lanceolatum) ATGTTCCGGCTGCTCCGAACGGTGGAGAAGCAGGGCCTTGTGCCGCTGAT
TGACAACCTGGTCAGTGGGAACATCCAGAAGGTCATATCTGTGCAGAGCC
GCAACCTCAACACCTTCAAGTGTCTCTTCTCGTCCAGCGGAGAACAAGTC
ACGCTAAAGGGGATCCCGTACAGCGAGCTGACAGTCGGCGTACCCAAGGA
GACATTCCTGAACGAGCGTCGAGTTGCTCTCAGCCCGGCTGCGTGTGCGA
TCTTGACAAAGGCAGGGTTCAAGGTGAGTGTGGAACGTGGTGCCGGTGCG
GAGGCACAGTTCAGCGAGTCCGAGTACGTCAGCTCAGGTGCGGAAATCAA
GGATACCGGAGATGTCTTCAAGTCGGACATTATCCTGAAGGTGCGAGCAC
CGAGCGCAGGGGAAGTCGGCCAGCTCAAGGATGGCGCACACCTCATCAGC
TTTCTATACCCAGCACAGAACCAGGAGCTCATCGACCTGCTGGCAAAGCG
GAATGCCACCGTACTGGCCATGGACTGCGTGCCCCGTATCAGTCGTGCGC
AGGTGTTCGACGCCCTGAGCTCCATGGCAAACATTGCCGGCTACAAGGCA
GTGTTAGAGGCAGCCAATAGCTTTGGACGATTCTTCACGGGTCAGATCAC
AGCTGCTGGGAAAGTGCCTCCAGCAAAAGTCATGGTCATCGGAGGTGGTG
TGGCTGGTCTGTCTTCCATCGGTACTGCAAAGAACATGGGAGCCATTGTG
AGAGGGTTTGACACCAGAGAGGCTGCCAGAGAGCAGATCAAGTCCTTAGG
AGGAGAAGCCCTTGAAGTCCACGTGGAAGAGTCCGGTGAAGGAGGTGGCG
GCTATGCCAAAGAGATGTCCCCAGAGTTCATCGCAGCAGAGATGGCCCTA
TTCGCCAAGCAGTGCAAGGAGATCGACATCCTGATCTCCACGGCGCTCAT
TCCCGGCAAGCCCGCACCAAAGCTGATCTCCAAGGAGATGGTCGAGTCCA
TGAAGCAGGGGTCCGTCATCGTCGACTTGGCAGCGGAAGCAGGTGGCAAC
GTGGCGACGACGAAACCCGGAGAGAAGTACGTACATCACGGGGTGACGCA
CATCGGGTACACCGACTTCCCCAGCAGACTGCCCACCCAAAGCAGCACCC
TGTACGCCAACAACATCAGCAAACTCCTGCTGTCACTCGGAGGGAACGGG
GAGTACGTGCTGGACATAGAGGATGAAGTCGTCCGAGGTTCCATCATCCT
GGACAAGGGCAAGATGATGTGGCCGCCACCCCCACCACCGAAGCTGGACG
TCACCCCAGAGGCCAAGCCAGCAGAACAGGTCGCGGTAGGACCACCGGAG
CCCAACTACTTCATGGATACCATGAGGAGTGCTGGGATGTACTCTGCCGG
GCTGGGTGTCGCAGCCCTTCTCGGAGTCGGCTCACCAAACCCAGCCTTCT
CCACCCAGCTCACTACCTTCTCTCTGGCTGGCATTGTCGGGTACCACACC
GTGTGGGGCGTAACCCCGGCCCTTCACTCCCCACTCATGTCCGTCACAAA
TGCCATCTCCGGTATCACTGCCGTGGGAGGGTTGCTCCTGATGGGTGGAG
GCTACTTCCCCAACAACTGGCCCACCGCCCTGGCCGCTACAGCGTGCTTC
ATTTCCTCCATCAACATCGGCGGCGGCTTCGTCATCACGCAGAGAATGCT
GGACATGTTCCGTCGCCCCGACGATCCACCAGAGTACAACTACCTCTACG
CCCTCCCCGGTGTCGGCTTCATCGGAGCCTACAGTTACGGTGAGATGATG
GGATACCCCGAGATGTACAACCTCACCTGCCNTGTACAACCTAACCTGCC
TCGGTGCGTCCCTTTGCTGTGTCGGCGCCCTGACAGGGCTAGCCCACCAG
ACCACCTCACGTGTGGGCAATGCCCTCGGGATCATCGGTATCGCCTCCGG
CATCGCTGCCACCATTGGTATCGTGGACGTGTCGGCGGAGACCTACATGC
AGATGGGAGCAGCCATGAGTGTGGGGGGCGCCCTCGGAGCCATCATCGCC
AAGCGCATCATTATCAGCGACCTCCCACAGTTGGTCGCGTTGTTCCACAG
CTTCGTCGGAATGGCTGCCGTGCTGACCTGCGTCGCCACCTACCTGGCCC
ACGCCCCCCACTGGGGAGATGATCCTCAGACCATCGAGAGAATCGCCCAG
TTCCTCGGCACGTTCATCGGAGGTGTCACCTTCACTGGCTCGCTGATCGC
CTATGGAAAGCTTCAGGTAGGTTCCAATTCACAGAGAACATGTTTGTATT
ACTGTAATTCTTTATTTGCTAAATTACGGTAAATTAATTTTAGGGACTTT
CATGGTCACTATTCAAAATTTCAACCACTAAAATTTAATCACAAATATTT
GATCACTCTTCCTCATGACTGTGTTGAAGCAAGAACTTTGTTGCCACTGT
GAGAAATAAATGCCGCAAATTCCACCCTTTTCCCCCAACTGCTACAGTAC
CAACCCCGCTATCAAATGGATTTACAGTATTCTAAGCTTTAGTTTGGGAA
TGGCGTTAGACTTCTAGAAAGTTTGTTTTTTTCCTCCAAAGAAATCTGAC
ACTCATCTTAAATTTTGAACATTTTTCCACCACTAAAACAATACAATTGA
TGTTGTATTTTTTACAGGGTACTCTGAAGTCTGACCCCCTCCTGCTCCCT
GGCCGCCATGCGCTGAATGCAGGAATGATGGCCGTCAACGTTGGAGCCTT
GGGCTACTTCCTCATGGACCCGAGCATGGGAGCCGGCATTGCGTGAGTCC
ATTGGCTGACTGCTAACCAGGGTAGAGCCGTGTACTGTACACTGTACACA
TACAGTACCGGGTACAATCAATTAGGTACAGGTCCAAAATACCTGAACCC
TGGTGTACCTGTACTGGACCGGTACTAATCAGGTCAAGCCTGACTGAGGG
GATGGCTACTTTGACAGATAATATTACTATGAAATTACCGTGGCAGTGCA
CTAAAGCCACATCTATTATAGACTACTATACTCCAGCACATAAAACACAT
TTGTAAGGCCGGAGTCAAATTTTCATCTGTGTTTTCATAAAAATATTACC
CAGCACAATTACAACATGCTTTTGTCCGTATTGAAAATCTGCTATTTTCT
GAACATTAGTAGCTTAGGTACAGGCTCAGGTCCGGACCTGTACCTAAACC
TGTGTACCTGTACCTAAAATTTGTTTAGGTACACAGCTCTAAACCTGGGG
TGTCTCCAAGAGCCATTCCTCCGTCCTGGGACAGAATGTTGCTTGTTGAA
CTTTATGACATGAAATTGATGAAAATGTATTTTCGTAAGCTTAAAATGAC
CGATTTAGCAACTAACATGGGCTCCCAATCAATGAGTGGGACGGAAAAAA
TTTAAAGCTGGAGTCAGCTCTGCTGCTAACACTTGACTACCACTCGAACC
ACACTGTCAGCCCAGAATCGTCTGTCCTCCATTGCCTCCCCCTTAGGCTG
AATTGTGTGATACATTACAAGGAACAATGCTGACAAATCTTCTCTTAGAT
TAACATTGTGAAACCACTGAGATTAATAGACCTTTGTATTAAAGGCAACC
TAAGCAATATTAGGGCGCCGAAAGTCATATATTCAAAATCAATTTTTTTC
TGATTTCTATCCATAGTTAGTTTATATAACACTATCCCATTGTATATCGA
CCATCATGGAGCAAAAATGTGATGTCGTTGTGCAGTGGGAACTCATTGAA
AATCTGAGCACTTGGAGGCCAGCCATCATTTCAAATCTTCCGAACATGCA
CGATTCTGACCGATAAATCCCGAACGCTTCCGAAGAAATAATCACGTGGT
CATGGCTCAATGTACGTCACGCGGCCGGAAGTTACCGAAGATTGTCGACA
GAAAACGGTTACGACTCGATTCTGGGCTGATTTTTGGGGGGACCCAATAA
ATAAAATACTCCTTTTGTGGCTTGCTTCTGTACTATTTTTAAACGCCCAA
AGTATGAAATAATGATGCAGATGTGCTAATATAGGGAAGTAATAATATTA
TTGTAAATTTCAACCTCACCAAAAATAATTGCTTTCCCCAGAATATTTCA
AGTTTTACCCCCTGAAATCGCTTAGGGCACCTTTAAAATGAGATACATAA
TAAAAGCATCAACAAAAGAATGAAATACAAAAAGTACAATAGTAGCACTA
CAGTCATAGGTGGGCAAAAGTTTCGCAGTGGCTTGAAGTTCGTGCCGAAA
GTTCACCACAAAAACAGCAAACACAAAACCACTGTGAACATTTCTGCATT
TGCAGTACAACTGATCACACTTTACTGATGTTCTTACAGATCTCTTGGGA
CGGCTACTTGCCTCTCCTCTGTGTTGGGTGTGACACTGACATCAGCCATT
GGTGGAGCAGACATGCCTGTGGTCATCTCTATGCTGAACAGTTACAGTGG
ATGGGCACTGTGTGCTGAAGGTACGGTCCTCGATATGGCACCTTTCATAG
TTTTTTTTCATGCTGTAACTGGTAGGTGTACATATGTCAAAAATAGCTGA
CTTCCTGCTATCTCATGATGTAAAGGAGATACGGTAATGAGTAGAATTCA
TTTTTATTTAGGGCAATGCTTTAGGGACTTACCAATGAAAAGTGTATTCC
CCTTTAACCCTTAAGCTGAGTTTCAGCCCAAAACAAACTCTCGGGGTTTC
CATTTGACCCCTGACCTCCGACCCGTAGCCCGTGAAACAGCCCAGCTTCC
GGGTTTCGCATGCTACACACATACAGTGCTGTTTTCTCCCGGGGAATTTA
CGGGGATATTTATGAAATACCCTGTCCTTCATAAATCTGTATCACAGATG
TATCTGGGAGTGACAGCTTAAGTTGAATTATGATACTGAAAACTTTTTTG
CAAAATCACAAACCTGTCCCATTAAGGGTGCCAATGACTTGGATATTTGA
TAGATACGGTAGATATTATCTGCTCTGCTTCTCACCACAGTCACTATTTC
CACAGGGTTCATGTTACAGAACAGCCTGCTGACTGTTGTTGGCACTCTGA
TTGGCTCGTCCGGTGCCATCCTGTCCTACATCATGTGCAAGGCCATGAAC
CGCTCTCTTATCAATGTCATCTTCGGCGGCCTGGAGGCCAAGACAAAGAC
TTGGGGAGGTAGGGAGAATCGTCAAGTATAGACATTCATTATATTGTGTG
CTTTTAATCTTATTATGTTACTAGGTAATATCCGGGGAAATGCTTCATGC
AGTGTTACAATATAACGTAAATATAGAAAACAACACGGGCTATTCCGTAT
CACCCAAGGTACCAGCCCGACCGCAGGTAGAATGGCCCATAGGCCGGAGG
GCGATCCGACCCGCGGGAGGGCTAGGACCATGATGCGGAATGCACCATGT
TGTATTTTATTTATGTCATACCCACCCGAGAAAACACACATTTCAATGCG
AAATGCGCCTGAAGTTGAGGGAGTTTTGTGTCCTCGAACAGAAAACTGTA
ACAACATTGATTCCAACCTCCAAATCCGGTATTCGAATTTTCAACGGTGG
CGCAAACGGCACGCTCAAAATGCATTATAAGTATTCTATGAAAGCCCGTG
TGATACAACTTAGAACCCCATGTGATACGGAAAATTATTACACGTTATTG
AATGTTTTCACGGCCCAGGTATGGCATTAAGTTATTTTACTGTCTACGCT
GTATATGTCATTCTTGTAAGGCCGAACTCTTTCCATGTGGTAGAAAGGTC
CAAAGACTTTGATATGAGATGGACGTGGAAGGATGATGGGTGAGGCATAG
AGAATGGAGATTTAAGTCTACTCGTAGTGTTTGCGGAGAACATATGGCAA
GAAGACTTACAGGAACAAAAAAGGGAAAATGAAAGCCATGGACTGCAACA
GTTTGCCCACTTTCTAGTCCAACTCAGAACTACATTTGTGCCCTCCACCT
TATCATAGCAGCAATGCTGTATTTGGTTTACTAGCACAGCTGTCAGTTCT
GCATATCAAAATCTGGTACTGTTTTTAATATGTATAACAATTCTTGCCAT
TCTTCATCAGGTGGCAAACCCATGGAGATCACCGGCACGCACACTGAGGT
CAACGTGGACCAGTCGGTGGAAATCATCAAGGAATCAAAGGACATCATCA
TCGTTCCTGGCTACGGTCTCTGTGCTGCCAAGGGACAGTACCCGCTGGCT
GCCATGATCGACACGCTCGTGAAGAATGGAAAGAACGTCCGCTTTGGGGT
CCATCCCGTGGCAGGGCGTATGCCCGGTCAGCTCAACGTTCTCCTCGCCG
AGGCCGGCGTTCCTTACGACATCGTCTTGGAGATGGACGAGATCAACCAC
GACTTCAAGGACACCGACCTGGTTCTGGTAGTAGGCGCCAACGACACGGT
GAACTCCGCGGCCCAAGACGACCCCAACTCCGCCATCGCCGGCATGCCCG
TTATGGAGGTGTGGAAGGCAGCGAATGTCATCGTCATGAAAAGGACTCTG
GGTGTGGGGTACGCCAACGTAGACAACCCGGTGTTCTACAAGCCAAACAC
GTCCATGCTGCTCGGGGATGCCAAGAAGACGCTAGAAGGCTTGCAAGGAA
AGGTTTCAGATTACTACACCAGCTAG Coding sequence (CDS) from alignment at Sc0000078:622350..628975+ >Blg00439.0 ID=Blg00439.0|Name=Blg00439.0|organism=Branchiostoma lanceolatum|type=CDS|length=3144bp|location=Sequence derived from alignment at Sc0000078:622350..628975+ (Branchiostoma lanceolatum) ATGTTCCGGCTGCTCCGAACGGTGGAGAAGCAGGGCCTTGTGCCGCTGAT TGACAACCTGGTCAGTGGGAACATCCAGAAGGTCATATCTGTGCAGAGCC GCAACCTCAACACCTTCAAGTGTCTCTTCTCGTCCAGCGGAGAACAAGTC ACGCTAAAGGGGATCCCGTACAGCGAGCTGACAGTCGGCGTACCCAAGGA GACATTCCTGAACGAGCGTCGAGTTGCTCTCAGCCCGGCTGCGTGTGCGA TCTTGACAAAGGCAGGGTTCAAGGTGAGTGTGGAACGTGGTGCCGGTGCG GAGGCACAGTTCAGCGAGTCCGAGTACGTCAGCTCAGGTGCGGAAATCAA GGATACCGGAGATGTCTTCAAGTCGGACATTATCCTGAAGGTGCGAGCAC CGAGCGCAGGGGAAGTCGGCCAGCTCAAGGATGGCGCACACCTCATCAGC TTTCTATACCCAGCACAGAACCAGGAGCTCATCGACCTGCTGGCAAAGCG GAATGCCACCGTACTGGCCATGGACTGCGTGCCCCGTATCAGTCGTGCGC AGGTGTTCGACGCCCTGAGCTCCATGGCAAACATTGCCGGCTACAAGGCA GTGTTAGAGGCAGCCAATAGCTTTGGACGATTCTTCACGGGTCAGATCAC AGCTGCTGGGAAAGTGCCTCCAGCAAAAGTCATGGTCATCGGAGGTGGTG TGGCTGGTCTGTCTTCCATCGGTACTGCAAAGAACATGGGAGCCATTGTG AGAGGGTTTGACACCAGAGAGGCTGCCAGAGAGCAGATCAAGTCCTTAGG AGGAGAAGCCCTTGAAGTCCACGTGGAAGAGTCCGGTGAAGGAGGTGGCG GCTATGCCAAAGAGATGTCCCCAGAGTTCATCGCAGCAGAGATGGCCCTA TTCGCCAAGCAGTGCAAGGAGATCGACATCCTGATCTCCACGGCGCTCAT TCCCGGCAAGCCCGCACCAAAGCTGATCTCCAAGGAGATGGTCGAGTCCA TGAAGCAGGGGTCCGTCATCGTCGACTTGGCAGCGGAAGCAGGTGGCAAC GTGGCGACGACGAAACCCGGAGAGAAGTACGTACATCACGGGGTGACGCA CATCGGGTACACCGACTTCCCCAGCAGACTGCCCACCCAAAGCAGCACCC TGTACGCCAACAACATCAGCAAACTCCTGCTGTCACTCGGAGGGAACGGG GAGTACGTGCTGGACATAGAGGATGAAGTCGTCCGAGGTTCCATCATCCT GGACAAGGGCAAGATGATGTGGCCGCCACCCCCACCACCGAAGCTGGACG TCACCCCAGAGGCCAAGCCAGCAGAACAGGTCGCGGTAGGACCACCGGAG CCCAACTACTTCATGGATACCATGAGGAGTGCTGGGATGTACTCTGCCGG GCTGGGTGTCGCAGCCCTTCTCGGAGTCGGCTCACCAAACCCAGCCTTCT CCACCCAGCTCACTACCTTCTCTCTGGCTGGCATTGTCGGGTACCACACC GTGTGGGGCGTAACCCCGGCCCTTCACTCCCCACTCATGTCCGTCACAAA TGCCATCTCCGGTATCACTGCCGTGGGAGGGTTGCTCCTGATGGGTGGAG GCTACTTCCCCAACAACTGGCCCACCGCCCTGGCCGCTACAGCGTGCTTC ATTTCCTCCATCAACATCGGCGGCGGCTTCGTCATCACGCAGAGAATGCT GGACATGTTCCGTCGCCCCGACGATCCACCAGAGTACAACTACCTCTACG CCCTCCCCGGTGTCGGCTTCATCGGAGCCTACAGTTACGGGCTAGCCCAC CAGACCACCTCACGTGTGGGCAATGCCCTCGGGATCATCGGTATCGCCTC CGGCATCGCTGCCACCATTGGTATCGTGGACGTGTCGGCGGAGACCTACA TGCAGATGGGAGCAGCCATGAGTGTGGGGGGCGCCCTCGGAGCCATCATC GCCAAGCGCATCATTATCAGCGACCTCCCACAGTTGGTCGCGTTGTTCCA CAGCTTCGTCGGAATGGCTGCCGTGCTGACCTGCGTCGCCACCTACCTGG CCCACGCCCCCCACTGGGGAGATGATCCTCAGACCATCGAGAGAATCGCC CAGTTCCTCGGCACGTTCATCGGAGGTGTCACCTTCACTGGCTCGCTGAT CGCCTATGGAAAGCTTCAGGGTACTCTGAAGTCTGACCCCCTCCTGCTCC CTGGCCGCCATGCGCTGAATGCAGGAATGATGGCCGTCAACGTTGGAGCC TTGGGCTACTTCCTCATGGACCCGAGCATGGGAGCCGGCATTGCATCTCT TGGGACGGCTACTTGCCTCTCCTCTGTGTTGGGTGTGACACTGACATCAG CCATTGGTGGAGCAGACATGCCTGTGGTCATCTCTATGCTGAACAGTTAC AGTGGATGGGCACTGTGTGCTGAAGGGTTCATGTTACAGAACAGCCTGCT GACTGTTGTTGGCACTCTGATTGGCTCGTCCGGTGCCATCCTGTCCTACA TCATGTGCAAGGCCATGAACCGCTCTCTTATCAATGTCATCTTCGGCGGC CTGGAGGCCAAGACAAAGACTTGGGGAGGTGGCAAACCCATGGAGATCAC CGGCACGCACACTGAGGTCAACGTGGACCAGTCGGTGGAAATCATCAAGG AATCAAAGGACATCATCATCGTTCCTGGCTACGGTCTCTGTGCTGCCAAG GGACAGTACCCGCTGGCTGCCATGATCGACACGCTCGTGAAGAATGGAAA GAACGTCCGCTTTGGGGTCCATCCCGTGGCAGGGCGTATGCCCGGTCAGC TCAACGTTCTCCTCGCCGAGGCCGGCGTTCCTTACGACATCGTCTTGGAG ATGGACGAGATCAACCACGACTTCAAGGACACCGACCTGGTTCTGGTAGT AGGCGCCAACGACACGGTGAACTCCGCGGCCCAAGACGACCCCAACTCCG CCATCGCCGGCATGCCCGTTATGGAGGTGTGGAAGGCAGCGAATGTCATC GTCATGAAAAGGACTCTGGGTGTGGGGTACGCCAACGTAGACAACCCGGT GTTCTACAAGCCAAACACGTCCATGCTGCTCGGGGATGCCAAGAAGACGC TAGAAGGCTTGCAAGGAAAGGTTTCAGATTACTACACCAGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00439.0-exon-Sc0000078-1570713199:622350..624138 | Blg00439.0-exon-Sc0000078-1570713199:622350..624138 | Branchiostoma lanceolatum | exon |
Blg00439.0-exon-Sc0000078-1570713199:624236..624615 | Blg00439.0-exon-Sc0000078-1570713199:624236..624615 | Branchiostoma lanceolatum | exon |
Blg00439.0-exon-Sc0000078-1570713199:625017..625141 | Blg00439.0-exon-Sc0000078-1570713199:625017..625141 | Branchiostoma lanceolatum | exon |
Blg00439.0-exon-Sc0000078-1570713199:626689..626819 | Blg00439.0-exon-Sc0000078-1570713199:626689..626819 | Branchiostoma lanceolatum | exon |
Blg00439.0-exon-Sc0000078-1570713199:627355..627507 | Blg00439.0-exon-Sc0000078-1570713199:627355..627507 | Branchiostoma lanceolatum | exon |
Blg00439.0-exon-Sc0000078-1570713199:628410..628975 | Blg00439.0-exon-Sc0000078-1570713199:628410..628975 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000078 | genome | Sc0000078:622350..628975 + |
Properties
Property Name | Value |
GeneID | Blg00439 |
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