Blg00436.0 (mRNA) - B. lanceolatum

Overview
NameBlg00436.0
Unique NameBlg00436.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:1041338..1045327+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00436.0 ID=Blg00436.0|Name=Blg00436.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3990bp|location=Sequence derived from alignment at Sc0000078:1041338..1045327+ (Branchiostoma lanceolatum)
GCGACGTCAACATGTTTTGACACGTAGTTGACTGCTCTAGATCTGTTCGC ACAACTTCTCAACCACATTTCTTTTGTTTTTTTGTTTTCATTTCATTTAC TGCATAACCTAAGTTACTAACATGTATGTTAGGTCTTTCTTGTTCCTGGT ACTGTGGCTGGTAGGGGCGAACAGCCACCTTTTGAAGTTTGAGGATTGCG GTGAGTTCAGCGGTTCTGATTTTAAATCTAAATCTCTGTTTACTGGTAAC TTTACCAAGAAACGCTACGCTGTCGTCACAATGTGTTACCGAGCTTATGC TATTTACAGGTTCTGTGAAGGGGAGAGTTATCCAGGTGGACTTTGTGCCG TGCGGATACCTCAATATTGAGTTCCACATGTGTAAGTGCATTGTTACTCC TCAGATAAGTTGGCTCTACCATTCTTCGTCTATGGTACCCTGCTACTACA CATATGTCATTCAAAAGCCTAATATACATGAACGCTACTGGAAAGGGTTG CAGTCTTTGGTCCACTGTTCATTGTGCTTATCGAAAAGAGCTAGTGGAAT TTTCCCGGTACAATGAGCCTGTAAACACTGGCATGTTTTCTCTGTTACTA CCAGTGGAAGAATTTCTCTTCATTGAGCTAAACCGGTTCGAGATCACCAC TATCAATCAATCAATCAATCAATCAATCAACCAATCAACCAATCAATCAA TCAATCAATCAATCAATCAATCCTTTCTTAAATAATTATGGGACATTTGC ATTAATTATGCAAGTTAGGGATTCATTTGAATAATTGATATCTGTTAATG TTCCATCTTCAATAAACTACAAAACGTTACTTGTATTTGAGTCCTACATG TATAATAATGGAAAACACTGCAAATACGGATTTTCCTCAGTAATTATGCA AATTGAGTTCTGCTGCAGTACCAAGGTCACATACCAGGGGGCCCAAAATC GACCTTGACCTTTGTCTCATCGACGCCCATCCACATACCATTTGTATGGA GATAATTTTTACAATTTGCTTAAGGATGGGGCACACTGCGCATCCTCATG CACGCTGATCTACACGACAGCCCCAGTCACTGCCAATGGTATGGGGGTGG GGAGATATATAATCTTAGGCTATTTCTAACTACTGCAAGCCTGGAGTCCT CATGTATTATCCAGTAGTATCTATTCCTACAGTGGAGACTGTGCAGAACG CCACCATACTCATGAACCAGATTGTGGAGGGCAAACCGGAGCCGGCTCCA CTGCCGTACATCTACGCCTGTAACCAGTACGACTTCTACGGACTGAGGTG TCCTTTTCGTGCGGGGGGACGGTACAACTTCAGTCTGGACCTGGCACAGG AGGAACCAGAGGTGTAGATACCTGTTACAGTACAGTCAAAGTTTGGATGT TGCACAACATTTGTTCGAATTTCGTTTAGACCCTTGTAGTGCCTAGTGGC AAATAGGGCAGCGCAAGTGTCCTCGCTGTTTTAGTAGCAGAGTATATCTT ACAGGGAGCGGTTGCCAGCCCTTCTCCTTTAAGCCCCCCTCTCACTAGAT CCGCGGCACGCTGGCGGCGTCACTGCGGCCGATCGAATTGACAAAGCACT CAACGAATTTCATGGACAAAAATGAACGTTTTTAAGCTTTGTGTGCTTTG TTGTCTATTTGATTATACTTGTACGTTTTGAATGATATTTCCATTGTAAA GTCAAGGGTAACACAAGTCCAGTTTAGGACGCAGCGACTCCGCCAGCGTG CCGCGGGTCCAGTGAGAGAGGGGCTTCAAAGTGCTCGAGGCACCTCCTCG AATACTGGATCCCCTATTTGCGTCCCTTCCGAAAAAACGGGTGCAGTCCC AACCGGGTTTGAACCGCGGGTCCAGTGAGAGGGGGCATAAGGCTGCAACC AGTTGAGCTACAGAGACATCCCTGCTTACAAAAGACTATGGTCCATAATT TCATGTTATTGACATGGCACAACTGTGTATAACTATAAAGAATTTAAAAC CAAAAAGCTTAGATTGCATTCCATAGCACTTCTTACAATAGTCACTTGTG CCGGATCCACCTGTCACCATTGTTAACTTGCACTGTCTGTATACTTTTAA TATACATTGTTTTATGTTGCAATTAGAACTCGGGCAAGACCTTGCAAACA AAACTCTATATAACGTACGTGTATATGTTATCTGACCTTCCCACCCAGTT CCATCTGAAGGGGAGGTTCACGCTGAAGGACCTGTCTGCGCATGTCATCT TCTGCAGCCAGTTCAGCTTCTGGTTCTGTTAGCTGAGGACAATGGGCATG AGGCTCAATTCCCGTCTCCATCAAAGTTACGCACTCTGGTTATAAAGCAA TGCTATACATGGCCATCTGTACACAAATAGTATGCACCCATCAAGTCTTC TTTCACAAGCATTGACATTGGAATGTCATTTTCTGTACATTTCATGTTCG ATTTATGTTACAAAAATTATGTGCCATTTGTCTTATGTTCTCTGGGGCCT CTTGGAAATCAACAATCTTGTTGTAGGGGCTGACCAGATGTTTTGTAGAT GAAATTAATAATAACATAATAAATCTACATCTTTATACTCAATCAAATAC TGGATACTACTATAATACAAGAACCTCTTTTTTATATAATCTATAATGAA ATACTGGATACTACTATACAAGAACCTCATTTTTTATATACTGGACTGTG ACCGTTACACTACAGGATGTACTAAGTAAAGTGGTTTCATATTCTTCAGT CTAGAATAACCTTTCAACTAAAAGCAAAAGTTTGATGATCAGATATAAAC GACAATCAGATTTATTGGTACATTTAGTCTTTTTTTATCCGTCATTTAAC ACTATGGGGAAGAACTGGTTCCAAGTATAAATTTCCACAGTTGATGGTTT TTATTCTGAGTATGCAATGTATGTATCATGAGATTTTGCTGCTATACTTT GAAAATATATCTGTTGCAGAAAATGGCAAATTGTGATTTGGTCACAATTC CATTTTATTCAACATATAAATGTACATGAATGAATAAGATCTTTCATATC AAAACAATGGTCAAGTCAAATGTCATGATGTTCCTGCACTTTCGGGCTAA AAAAATCATGTTCTAAAGGTAATACGTACTCAAATCAGCAAACCTTATAT TCTTCTCAATAACTGCAAACAACATATCACATATACTCATAATTTCCCTG AGAGAAATGTATTAGAACTATCACTGGTTTACTATCAAGATTTGCTAAAG ATACAGTATACATGTGTTCAAACAACATCATTTCTGACTGTAATCTCTCA TGACCTACATTTAGCTTTGTTTGTCTAAAACCAAAACATCACTGAGAGTC ACACTGAAAGATTAGCATCTATTTCAGGAGTTTTGGTTAAATACCTGTTG AATTCTGGTTCAGTCACTGATGAAAGACAGCGGATGGTGTCTGAAAGGTC TGACCGTTTGCAAGTCTATCCAGTTGCTTGAGTAACTATCATCTTGCATA CTAGTAGTTTAAGCTGACTCTGATACATGTAAAAATGGAATTTTTGTAGG TTTAGACATTTTACCTAACCTTGTATACATAGTATTACAAATATGCCAAG AATACTGTTGGATTTTGTAAGTCCACAATGATAAAAAGTCTAATAAATCT GACCATCTTTTAACACTGCTAACTCCTGTATTTGGCCTCCTATCATTCAT ATTCAAATCAAATGTGCGTTATTTAAAGTAAAAAGAAGCCACATAATAAT CTCCAACTATAAATTGTGTGACTTTGTAATCATGATGTAACTGAAAATAA TCCTTTCTAAACACCTGTTTGGCATAGTGCAACTATATCTCATGCACTAC CCAATGATGTCCACTTTGTGAAGTATAAAAAAAATCCATTTTCACGAGGT AGGAAGAATCACAATAATCCCTGGTCATGTCTGTCTTGGAATAACTTTGT GATAGAAGGGATAGAGGGGAATAAACATGTAAAACCAGAA

Coding sequence (CDS) from alignment at Sc0000078:1041338..1045327+

>Blg00436.0 ID=Blg00436.0|Name=Blg00436.0|organism=Branchiostoma lanceolatum|type=CDS|length=414bp|location=Sequence derived from alignment at Sc0000078:1041338..1045327+ (Branchiostoma lanceolatum)
ATGTATGTTAGGTCTTTCTTGTTCCTGGTACTGTGGCTGGTAGGGGCGAA
CAGCCACCTTTTGAAGTTTGAGGATTGCGGTTCTGTGAAGGGGAGAGTTA
TCCAGGTGGACTTTGTGCCGTGCGGATACCTCAATATTGAGTTCCACATG
TTGGAGACTGTGCAGAACGCCACCATACTCATGAACCAGATTGTGGAGGG
CAAACCGGAGCCGGCTCCACTGCCGTACATCTACGCCTGTAACCAGTACG
ACTTCTACGGACTGAGGTGTCCTTTTCGTGCGGGGGGACGGTACAACTTC
AGTCTGGACCTGGCACAGGAGGAACCAGAGTTCCATCTGAAGGGGAGGTT
CACGCTGAAGGACCTGTCTGCGCATGTCATCTTCTGCAGCCAGTTCAGCT
TCTGGTTCTGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00436.0Blg00436.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00436.0-exon-Sc0000078-1570713199:1041338..1041537Blg00436.0-exon-Sc0000078-1570713199:1041338..1041537Branchiostoma lanceolatumexon
Blg00436.0-exon-Sc0000078-1570713199:1041647..1041718Blg00436.0-exon-Sc0000078-1570713199:1041647..1041718Branchiostoma lanceolatumexon
Blg00436.0-exon-Sc0000078-1570713199:1042520..1042698Blg00436.0-exon-Sc0000078-1570713199:1042520..1042698Branchiostoma lanceolatumexon
Blg00436.0-exon-Sc0000078-1570713199:1043536..1045327Blg00436.0-exon-Sc0000078-1570713199:1043536..1045327Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:1041338..1045327 +
Properties
Property NameValue
GeneIDBlg00436