Blg00428.0 (mRNA) - B. lanceolatum

Overview
NameBlg00428.0
Unique NameBlg00428.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:717002..719577+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00428.0 ID=Blg00428.0|Name=Blg00428.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2576bp|location=Sequence derived from alignment at Sc0000078:717002..719577+ (Branchiostoma lanceolatum)
ATGGCCTCAGGAGCCGGCAAACGTAAGACAAGGAGGCCCGTGAGGTTCAG GGACGACGACACCCTCACAGAGGAGGAGACCACCCGGCGGATCGATGCCA TGACAGCCGAGCTTGATCGTCTCGAGTCGTCGCTGAGAGAGGAGATAGCG TCCCTTACCAGCGGGTCCACATCTGGTAGCGACACAGCTACAGACACGAG CATCTCGGAGCAGGACAACGACGGGCTCGAGGAGACACCCCTCCGCTCCG ACAGGCCATCGCTGAGGGAGCTTCAAGAGATCGCCCGGTTGCAAAACTCC ACCGCTCGCAGCACCCGCAAGAGCGGCCACGCTAGCGACCGGACCCCCAG AGAGGTAAGAAGTTGCGCAGTGTCCTGGATAGAAAGGTGCATGACAAGGT TGTTGTTGAGGTCGAGTGGGCCCACATGCATGTCTTCGAGGAGGAACTGG CCACCCACGCATCGCTCATGTGGTACCAGTTTGTGTCCGGCGAGCTGGCC ATCATTAACGACCCCCGGACGGAGAGGCGCGAGAGGAAGGCCAGGATGAC CCTGCTGGAAGATTTATTGCTGGAAGTGCCAACGTACACGGTCCCTCGGC CTGGCCGAGTCCGAGGACAAAGCTTCTCCTCCTGCCCCGCAGATGACATT CCTAGGGGTGGAATACGACTCGCCATGTCCAAACGGGTTCCTCCCGACCG TCTCGCCGACGCCTTGACTATACTTCGGGAGTGGTCATCCAAGACGAGGG CGACCAAGCAGCAAATACAGTCCCTGGTGAGCCGCCTCTCCTTTATCACG GCGTGCGTGGCTCCGGGCTGCGTATTCCTGTCACGCATGTTGAATGCTTT ACGCGGCCTCCGCAGGCATCACCATCGCGTGCGGTTGATCTCCGAATTCC GGAAGGACGTCCGGTGGTGGCTGCACTTTCTCCCGCAGTACAACGGCGTC TCCTTGATACCAGACCCCACGCGACGCCGGCTAGCAACCCAGCCTACCAC GGACGCTTGCCTCACGGGCTGCGGAGGCACATTCGGGTCCGAGTTCTTCC ACACTCCGTTCCCACCCGACGTGTTGAGGCGCGCACATCCTATTCATCGG CTCGAGATGCTAGCCGTCATCATCGCGTGCAAGCTCTGGGGCCTTTCGTG GTCAGGCTGCTCCGTCAACATCACGTGTGACAACACGCTCACCGTGCAAG TCATTCACTCCGGCCGCTCGTCTGATACGTTCATGCAGGCTTGCGTGCGG GAGCTGGTTTATCTCCAGGCCCTGAAAGACTTCCACCTTGTCGCGCATCA TATCCCGGGTGACGAGAACAGGCTGGCGGATCTCCTCAGCCGATGGCACC TCAGTCCCCAATCGGCCGCCAGGTCACTTGCCGTGGTAGGGCCGGGCCTC TCCCGCGAACGAACAGTCCTCCAAGCTGACTTTAGTTTCTCCCATCCTTG GTAGCTTCGACAATGTGACGTCGGCTGCATGGCTCTACCGTGTTCACACC TTGTCTTTCTTTCCCTTCCAGACGAACTCTGGCGGATCCTGGAATGGGAC GCTCTCCGATCGCAGCAAGTGGCCTTTGCCCTTGGCACCCAGGCCAATCA CCGCACGCAGTTCCGTGCATATCAACTATTCTGCTCTTTCTTCGACCTCC CACCGCTGCCCGCCAACCCACATCAACTCGCATGCTACGCACAGTTTCTC AGCCGCTCCATGAAATCGCCTGCTAGCATCTCGCAGTACCTCTCTGCCGT CAACCTGCTCCACAAAATGAACGGTCTCCCGCCGTGCTCCACATCCTCCT TCGAGATCCAACAGACACTCAGGGGAATCAAAAAGACGCTGGCACACCAG CCTCGGGAGCGTCACCCCCTCACTCCCGAAGTTCTGCTCACACTGCTGAG CTACCTGGACCTGTCCCTCCCACAGGACATCACACTTTGGTCGGCCATCC TCATCGCCTTCTTCTCATACCTCCGCAAGTCCAATCTCGTTCCCCCATCC AGCACCAAATTCGATCCCATCAAACATCTCTCGCGTCAGGCCATCCTCGT CGCCAATTCCAGCCTTCTCGTCAACGTCAGCTGGTCTAAGACACTCCAAG CCCGAGAGCGCACAATCTCTATCCCGGTCCTGGCAATCCCAGACCATCCC CTCTGCCCCGTCACCGCCTATCGCAGGATGGTCGCCACCCTGNGGATGGT CGCCGCCCTGCCCGGTCAACCAGGTGACCCGGCTTTCCTGCTCCCGGGGC GCTCCTTCTTGACAGCATCCAAATTCGAGAAGGCCTTTTCCGCTCTCATC ACCAACGCTGGTTTCCCCAAGGGCCACTTCACGCCGCACGATCTCCGTAG AGGTGGCTACACTCTGGCCTTTGAGGCCGGTGTCCCCAGGGAACTCCGCC GTGTCCACAGCGACTGGAAGTCCGACGCGGACCTCCTTTACCTCAAACTC TCGTTACAAGAAAGACTACGTCTCCCCGCAGCCATGAGAGCAATCATATC AGCCCGACTCTCCTACAACCCTGAAACATCCCTACACGTGCCTGGCCCTC CGTTTGGCCAACGTTCTTCTGAATAA

Coding sequence (CDS) from alignment at Sc0000078:717002..719577+

>Blg00428.0 ID=Blg00428.0|Name=Blg00428.0|organism=Branchiostoma lanceolatum|type=CDS|length=2301bp|location=Sequence derived from alignment at Sc0000078:717002..719577+ (Branchiostoma lanceolatum)
ATGGCCTCAGGAGCCGGCAAACGTAAGACAAGGAGGCCCGTGAGGTTCAG
GGACGACGACACCCTCACAGAGGAGGAGACCACCCGGCGGATCGATGCCA
TGACAGCCGAGCTTGATCGTCTCGAGTCGTCGCTGAGAGAGGAGATAGCG
TCCCTTACCAGCGGGTCCACATCTGGTAGCGACACAGCTACAGACACGAG
CATCTCGGAGCAGGACAACGACGGGCTCGAGGAGACACCCCTCCGCTCCG
ACAGGCCATCGCTGAGGGAGCTTCAAGAGATCGCCCGGTTGCAAAACTCC
ACCGCTCGCAGCACCCGCAAGAGCGGCCACGCTAGCGACCGGACCCCCAG
AGAGTGGGCCCACATGCATGTCTTCGAGGAGGAACTGGCCACCCACGCAT
CGCTCATGTGGTACCAGTTTGTGTCCGGCGAGCTGGCCATCATTAACGAC
CCCCGGACGGAGAGGCGCGAGAGGAAGGCCAGGATGACCCTGCTGGAAGA
TTTATTGCTGGAAGTGCCAACGTACACGGTCCCTCGGCCTGGCCGAGTCC
GAGGACAAAGCTTCTCCTCCTGCCCCGCAGATGACATTCCTAGGGGTGGA
ATACGACTCGCCATGTCCAAACGGGTTCCTCCCGACCGTCTCGCCGACGC
CTTGACTATACTTCGGGAGTGGTCATCCAAGACGAGGGCGACCAAGCAGC
AAATACAGTCCCTGGTGAGCCGCCTCTCCTTTATCACGGCGTGCGTGGCT
CCGGGCTGCGTATTCCTGTCACGCATGTTGAATGCTTTACGCGGCCTCCG
CAGGCATCACCATCGCGTGCGGTTGATCTCCGAATTCCGGAAGGACGTCC
GGTGGTGGCTGCACTTTCTCCCGCAGTACAACGGCGTCTCCTTGATACCA
GACCCCACGCGACGCCGGCTAGCAACCCAGCCTACCACGGACGCTTGCCT
CACGGGCTGCGGAGGCACATTCGGGTCCGAGTTCTTCCACACTCCGTTCC
CACCCGACGTGTTGAGGCGCGCACATCCTATTCATCGGCTCGAGATGCTA
GCCGTCATCATCGCGTGCAAGCTCTGGGGCCTTTCGTGGTCAGGCTGCTC
CGTCAACATCACGTGTGACAACACGCTCACCGTGCAAGTCATTCACTCCG
GCCGCTCGTCTGATACGTTCATGCAGGCTTGCGTGCGGGAGCTGGTTTAT
CTCCAGGCCCTGAAAGACTTCCACCTTGTCGCGCATCATATCCCGGACGA
ACTCTGGCGGATCCTGGAATGGGACGCTCTCCGATCGCAGCAAGTGGCCT
TTGCCCTTGGCACCCAGGCCAATCACCGCACGCAGTTCCGTGCATATCAA
CTATTCTGCTCTTTCTTCGACCTCCCACCGCTGCCCGCCAACCCACATCA
ACTCGCATGCTACGCACAGTTTCTCAGCCGCTCCATGAAATCGCCTGCTA
GCATCTCGCAGTACCTCTCTGCCGTCAACCTGCTCCACAAAATGAACGGT
CTCCCGCCGTGCTCCACATCCTCCTTCGAGATCCAACAGACACTCAGGGG
AATCAAAAAGACGCTGGCACACCAGCCTCGGGAGCGTCACCCCCTCACTC
CCGAAGTTCTGCTCACACTGCTGAGCTACCTGGACCTGTCCCTCCCACAG
GACATCACACTTTGGTCGGCCATCCTCATCGCCTTCTTCTCATACCTCCG
CAAGTCCAATCTCGTTCCCCCATCCAGCACCAAATTCGATCCCATCAAAC
ATCTCTCGCGTCAGGCCATCCTCGTCGCCAATTCCAGCCTTCTCGTCAAC
GTCAGCTGGTCTAAGACACTCCAAGCCCGAGAGCGCACAATCTCTATCCC
GGTCCTGGCAATCCCAGACCATCCCCTCTGCCCCGTCACCGCCTATCGCA
GGATGGTCGCCACCCTGNGGATGGTCGCCGCCCTGCCCGGTCAACCAGGT
GACCCGGCTTTCCTGCTCCCGGGGCGCTCCTTCTTGACAGCATCCAAATT
CGAGAAGGCCTTTTCCGCTCTCATCACCAACGCTGGTTTCCCCAAGGGCC
ACTTCACGCCGCACGATCTCCGTAGAGGTGGCTACACTCTGGCCTTTGAG
GCCGGTGTCCCCAGGGAACTCCGCCGTGTCCACAGCGACTGGAAGTCCGA
CGCGGACCTCCTTTACCTCAAACTCTCGTTACAAGAAAGACTACGTCTCC
CCGCAGCCATGAGAGCAATCATATCAGCCCGACTCTCCTACAACCCTGAA
ACATCCCTACACGTGCCTGGCCCTCCGTTTGGCCAACGTTCTTCTGAATA
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00428.0Blg00428.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00428.0-exon-Sc0000078-1570713199:717002..717355Blg00428.0-exon-Sc0000078-1570713199:717002..717355Branchiostoma lanceolatumexon
Blg00428.0-exon-Sc0000078-1570713199:717418..718309Blg00428.0-exon-Sc0000078-1570713199:717418..718309Branchiostoma lanceolatumexon
Blg00428.0-exon-Sc0000078-1570713199:718523..719577Blg00428.0-exon-Sc0000078-1570713199:718523..719577Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:717002..719577 +
Properties
Property NameValue
GeneIDBlg00428