Blg00426.2 (mRNA) - B. lanceolatum

Overview
NameBlg00426.2
Unique NameBlg00426.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:289209..297484+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00426.2 ID=Blg00426.2|Name=Blg00426.2|organism=Branchiostoma lanceolatum|type=mRNA|length=8276bp|location=Sequence derived from alignment at Sc0000078:289209..297484+ (Branchiostoma lanceolatum)
CTTTCCGTTGTTCACTTTTCGCGAATTTCTCCTCAAGCGGCTCAAATTAG GGCGCAAATTGTGAGACGTTCGGGAGTCAGAACGATCCCACGTGATCAGG AACAGGTGCCACAGAACTCACAGAACGAACAGTTAGATTCTAGAACCGAC GGTTAAAGATACAAAAATACATTGTTCTCGATACAGTCGGAATATCCTTC ATGTAAAACGTACTCTTACGATCGTAGGGCTGGTTTTCCACATGATGGCG GACGACACTCTCGGGCGGTTAAACGCCACAGAGGCGGCCATCGACCAAAT CAACTTCACGCTAGAAGTGTACGGCCGGAGTATGGACACACTGCTGCTCA TCCTGTGCGCCTGCCTCATCATGACCATGCAGGCAGGCTTCGCCCTGTTG GAAGTCGGCTCGGTCAAGGTCGCAAACACCTACGCCATCCTGCTCAACAA CGTTCTGGACGTTTGTAAGCAACAGGTCTTCGCAGTATCTTTTGTATTCT AACTCCTTACTCATGTTCGTAAAACGTAAATTCGTACCATTTGTGGTTGA CTCAAGGTTCGCACCGTTTGAGATTACAAAACATTCGTTGCGTTCCTCGC AAAATATTTCCATCAGGACAAAGGACAAATCATATCATTTATAGACCCGC ACAAATCTGCCGAGAGTAAAGACTGTTTAATCATTTTGTCCACAGTGCAA AATGATGTGAAAGTGCAATGGATTAGATACAACTACTGGACATCTAACAC TTTGTTCAATCTCTTTCACATCCTTCAACATCTTGGAACACTGTGAAACA TTTTTACTAACCCAATTTATCAATACCCTGCTTTTGAAAAGTACCATGTC TTTTTTTAAATTCTTTTTAAAGAAGAATTTGTCTTTGTTATACAGGCATA CATGGAAATCATTGTTACGAATCTTTCGCTTTCAATCAATCTTTTATACA TCATTCCTTGCATTGTCTCTCCAACTTGGAAAGATTTTTAACGATCTCTT TTTTTCCCCGATCTGGTTTTGTTAATCAGGAATAACTCTATTTTGTGTAA ATTTGTTTTCATACGCCACCAGAGCTCTCGAAGGTAATAGGAAAGTCCGG TCCGTTTTCTTGGCATGCTGATTTTATTTTTTAAATACCCAAGCATTGTT CCGTCCTTATTTTTAATGGCAGTGCGCTATGTGAGAAAACGGGTTTCTCC GAGACCTAATCTTTGAAGGAACCTTGGGTAGAGACAGTACAGAGATGTCG AATTCAAAACGAAAATTGCAAGCACTAGATCTCTCAAGCTGTCAGTTCTT TGAAATGTTCTAAATCTAGATTCTATCCCGCCAATTTTCCCTCAACAAGC GTTACAGTTCGACTTAAGAAGAGTATAATACGCTGCCCAATTCGAAATAG CGCCTGGCTTGTATAGTGTCAGCTTATTTTACATAGACAAGCACACTTCA AATACAATCATGGTTTGTGTGGAGTGTCATACTGCATATTTTACGCTCTT TATATGGTGTTGTGTATTCTGGGATCTTATCCCTATCTCAAACATCTAAG ATTGTTACAGCTAGCACCAACGTGGTTAACATGCTGCCTTGTCTCCATAG GTGTTGGCACTTTAGGCTACTTCTTATTCGGATATGCTGTGTCGTATGGC CCAACGACCAGCGGATTCATGGGGACGGACTACTGGGCTCTTCGCCATCT CCCGAACGATGACGCGCTGACCTGGGTATTCTTCCAGTACTCATTTGCCG CCACCGCCACTGCTATCGTGTCCGGGGCTATGGTTGGTCGCACTTCATAC CACGCGTACATGATCTACTCTTTCATCATCACCGGCTTCGTGTACCCGAC AGTTGTTCACTGGATATGGAGTGGCAATGGCTGGCTCAACTCCGATTTGT ATGGTCTCGCCTTCCAGGTAATACCCCCATTCCACAAGGACGGCGCTCTC GCCGCACGCTTTCTGCGACTTATCATTCAACAGAGCGCTCAACGAACTTC ATAGATAAAAACGTATATTTTACGCTTTGTGTGTTTTGCTGTCTTTTCAG CCAATACTTTTACAGCTTGCACGATATTCCAACTATTAAATCAAGGATTA GACAAATTCGATGTAAGTCGCAGCGAGAGCGCAACACGATCCCCGTCTAG TGGAATGGGGGCCCAAGAAAGAGTAAATTGTTAACATTATGAAAACAAAG TGATGGGCTGAGGTCCAAACAAAAACTATAAAAGGTACCTCAGAAAAATG TTAACGTGGCGATATCTATTATCGTCCACTTTGGGTTATGTCCACATATA GAGGTGTATCATGTAAAGTATGAATATATGCTCACATGGCGTTAATCAGG CGGAAAAAAAGATTACAGATCATTGCACCTTTAGAAGATAAATGACGTAT GAAGATAACCGGACGATGATTGGTACCCAGGGCTCGAATTACTGGGTTCA TGTGGTCTTTTGTACACCCGAAATCGGAGCTGTGCACGTATTTTGTTTTT TACTGTGGGTGCACTAATTAACCCCTCAATACCATGAGGAACTTGCCTTT ATAATAGTAATAGTCTCTATTGCATATTATTGCCGCGATGGGCTAAATGC GCAAATGATGACCACATGTGGTATATAAGAAGCAAAATGTAAAACAAGAA TTGATGAAATGCTACATTCTCACAATCAAAAGTAAAAAACCGACAAAATT GTGGACCGTTATTAAACTAATGTTGATCGCCTAATAGTTTCTTCCCTTTT TGAAACACTAAAAGAAAACTACATACTTTGCCCATCATAATTTAAATGTT CGTTCTTACATGACAACAGGTATATACATATATTAAATGTGACTTGCTTT GACCTTTTTGGCGACGCTTCAAGAAGGCACCACACAGTTATGTATTTGGT TCCAAAAATTCCATAGATCCCATCTATGCCGAGTTGGTATGCCCGGAATG TTACGCGTAGTAGAAACCGGCCAAAGATTCCATGGCAGGTCAGATAAGAT CTCCCGGGAGGATCAGCCTCCCGCCCTCTCCTCCGCTGAGCAGGGTTTGG CAAACTGACGGGAAATTCCACCTCTGAAGTACAAGAGAAGAACTCTTTAA TAAATTGATTTTTCGGGATTTAGGGTCATGACTCTTGTACATTGTACATA GGGAAAGTATATCGATTTGTATTCCTGATCGCCACGTTATTTCCGTGTGT GAGGCAGCCCGTTTCCTTGACCGCTCATATGGCTCTGTTTAGAAATTACC GTCACCGATGTGTTACTTCTCTGGACCAATCACCAATACTGTCTCTCTGC TCAGAATGGAACTCCAGGCAATTAGCCTGTCTGAAGGATGGTTTGAATCA AGGATTCGAATTCATCAATAAATTAGTGGAAAAGTCAAAATGTCAAATGT CTCTTGGCTGTCCAACAATAAGTAGCCACATTTTAACCATTAGCCATGCG GCCTGGCACCTAAGTTGCAATGTGTCAAAACATAGCTTTAAAATGTTAAT CATAGACACGTCTTATATATAGCCACTCAATCGTCGCCATGGCAATACGT TTTAATGCCTTTTTTGTTGTAGATTTCTTGTCTACTTTTATTGTCTTCAA CAGCGGTTGACGCTCATCTTCATATAAGGAACAATCGAATAAAAAGTGTG TCTCATTTACAACACATAAGTGGTCATAGAATTTGCATGTTCTTTTATAA ACAATAGTTTTACACTGATCATGTATTATTTAGGACTTCGGGGGAAGCGG TGTGGTGCACACCACGGGAGGGACAGCTGCCCTGATGGGGGCACTCGTAC TGGGCCGCAGAAAGTTGACCAAGGAGGTTGCAGAGCACGCCGTCCCCGAG TCCTCCCCAGCCCTGGTCACCTTAGGTGAGAGAAACAATAATCGTATAAA TGATGTTGTATTTCCTGTAGTTATGATTGACTGTTGCTGAGTCGTGATTT ATAGATTATGTATTACATACCTGCTTCAGACCTCTGCTCATTACTTTATC TTGTAATGCGCATGGATACGTTTGAGCTCGGGGACCACTTGAAATATACC AATGATGTGAATAGAAGTAGAAACTGTATAATTGCTCCTTTGTCAGCCAT TTTACGACCATTGATTATACATTTTATCTCAAACTGCCCCTTTAATGATA GGTAAAGAAAAAGCTTTTTATAGAAGCCACCACAACTTACCACAACTTCC AAACGTTTACTGGCAAAAAGAAAACAAGAACACTGTTAACCTCTCAAAAA CTTTTCTCCAAGCAGATGTTTCGGTCGAGAAGGGTAGGAGTGCCCGGGAT TCCCGGGATTCCCGGACACTCCTACCCTACTCGACCGAAACCTCTGCTTG GAGAATACAAAAACCGTCGATTGTATTCCGTAGTAGTTCTTTGAATAGCC ATTTGTTCCACTTGTCAAGATTGTCAACTCGCACTGTCTGTACTGTTTGC CATTTATATACATTGCTTCATGTTGCAATTAGACCTCGGCCAAAATTGTA AATAAAACACTTATTCTCTGAAATGGAATTTGTCAGATAAAATCATTTAT TTATGTAAAAAGTACAAAAGCTGTTGACTAATACTGACCCGTGGTCTGCT GCTGACGAACAGGTTTCTTCATCCTGATGGTCGGCTTCTTCGCCTTCAAT GGCAGCTCGGAGGCCCACATATCTCGCCCAGGTGACCCTGAAGCCGTGGC CCGAGCCGTCATCAACACAGCCCTGGCCTGCGCATCTGGTGGTGTAGCCA CCCTTCTGTTTGAGCGCGTGGTTCACAAGAAGATCAACGATTTCTATGTG CTGTGCATCGTGGCGAATGGATGCCTTGCAGGAACTGTAAGCTCAGCTTG TACCTAAATGCACTACACGGCAGGGATTCTCACACTAAGAGCCCTGTCAC ACATGCGTATATTCAAGTGCGTATGAGTTGCGCATCAACATTTCTTTGGT TTAATAAAGTTTGAGGGGAAGAAGTTGTTTTTCACTTTAACCTACCGTTG TGCAGCCTGCTTATCGAACCAAAGAAATGACTTCTTCGGCTGCAAACTTA ACCTAAACCAAAAACATGTTCATCCGCAACGGAATTGAAGTGTGACAGGA GCTTTACATGTTGCTGTGCCACAGGAAAGATTTTCTGTGTACTTTTCGTT TGACGGTGAAGGCAAAAGAAACCAAATAAATGATCAAAGATCTCTTCCCC ACGACTAATGTAGTTTGTTCCTTAAAAGTTGTGTATTCTGCATATGTTTA AATCAAGAGCATGATTTCCATCGGACCATGCCTGTAAGCAAAAATGACCC TATATTTCGTCCAGGTTTCAATCTGCGCTGCCGTCAACGTTGCGACAACG TACAGCACTTTATTCATTGGATCTTCCGGGGCCATTATTCACTGCCTGTG GTCCATAAGCCTGCACAAGTTTACTCCGATCGAGGACCCCGTGGATGCCA CTGCAGGTTCGACAATTACATGAATGTAGCAACAAATATTCTCAGACTCA TCTAGTCCTATTGTTACATGTCAATATCATAGATTATCATTGTCACTTAC GCTATACATGTTACATTTTCTATGTAGTCCTGCTGATGAAAAAATTAAGA AAATGCATCATGTAAGAAATACACGCTCCAAGGGCTGGGGATCACCAGAA CCGACTGGAGGGTCTACGCCGAGAGTAGACAAACCTGGCGTGATCTAGCC ACGCATGTCTGTAGCCGCTATGTATCAGTTCCCGATGCTCGCGAATGATT GATTGATTGATCATGTTCTATACATAAATCAACTCCAGTTTTACAGGCAT GTGGTATCAGGTAGTAGAGATAGCAAAGCAGTCTAATATAATGACCCCTG TATATTCCCACAGTGCACCTGGCACCAGGAATTTGGGGTGTAATTATTTG CCCCTTCGTGGACAAGAACAAGGGTATCTTCTACTGTGGCTATGCTGGAC AGTACGCTGCCTGGCGTCAACTGGGAGTCCATGTGGGTGGGCTTGTGTGC ATCATCGGATACACAGCTGTGACCACTTTCATCATCTTCACCAGTAAGTT CCTCTGGTCCCCTCCTGCTGAACTTGAAATCCAAACTTTCCCCACACCGA TCTTAGATAAGCAATGGTTGATATAGATGAAGTATAGAATAAGGTGATAT TCTTGTTCAACGTGCCCTTAAAAATTTACCCTCAAACGTAGCCATGAAAC GCATCATGTAGCAAAATTAGACCCCCATTCCACTAGACGGTGCTCTCACT GCGACCTCGAGGCGACTTAAGGCGGATTTGTGTTACCTTTGATTCTATAA TTGGAACATCATGCAAAATGCAAAAGTATGACTGAAAGCACAATGATACA CACAAAGCGTAAAAAATATTTGTTCTTTTTCTGCGCAATTCATTGAGAGC TCTGGTCGCAGAGAGCGCGGCGAGAGCGCCGTCCTAGTGGAATGCGGGCA TTACCAATGAAGCCTTCTGAATTTTCTTTTTCAGTATTTGACAAGTTAAA ACTGCTCCGGTCGCACCAGGAGAAGTTTGAGCACGCGGAAGCCTTGCGGA TTCACGAAGAAGAGCTGGCCAAACAAAGTCACCATGGCTTCTTCCATGAC GTTTTCCATCATCATGAACATCATGAACATCATGAAGGTAATGATATTAC ATCTCATGCAGACCCAAACACATACAGTTGTCAGCACACTGTGTTAATAT GAATTCTCTCATCATGTTGCATACAAATCATTATTTTGGTCATTGGATTA TACGTTTCAGATTAACAGTAATCCTTTTTGTAGAAATCCCTATGGGCTGA TTGGACTAATTACACAATGTATCTGAAAAGGATAAGGGTGATGACTGAAT TTTCTAGAATTGTAATTAATCAAGAAGAGATTTTGCACCATGGCCAAATG CACACAATGTGCTTCTAGTCGCTCTGTCCAGTATAGTTTTTCATACTTTT TCATAACTTCCTCAGCTGCACCTGCACCGAAGAAGAGCGTCTCCTCTGCA TTTGATGATGCTGTAAGAACAAGCGAGGCTGATGTGGTCGTCACGGTTAA CTCTGGGCAGTCTCTGGACGGGTCTGTGATCAAAGAGAGCGTGTTTTAGA CGATTTACCAGCACGACTGGCAAATTCTTGCAGCATCAATGAATAATGTT CCGTCTGTTTAAACTACAACATTTTTTTTTACTCGGAAACACTATTCAAT AAAATCTCCCCTGCTGCTGCAACCTTAGTCCGCTTACACATTTTTTCGCG AGATATTTTCTTACGTGAAGCTGGTATGGCCATGTTGATTTGATTATGTG GATGACATCCGTGCGCGCATCAATTTTCGCCCGTTTAAAAAAGTTTTCGG CCATACTGTAAATTATACAAAGCAGCTGCAAAATAAGAAAATCCATGCTG TGAATATGTAGGAAAACGAAAACTTATGTCGTAAAATGCCAAAGTCATGT AGAAGATGTGAAATAAGAAAAATCTATTATTCGGTATACTATACACTGTG TGGTAAGTTTCGTTCAACCTTTCTGACCACGTAGATTTCAGATTGAAGGC AACTTTTTTTGCTAAACTCTTTTCTAAATTTGCACGTTCTCATCAGTTTT GAGATTCCCAGAAGATGTCATCCATATAATCAAATCAACATGGCCTAACG TTAAATGTAGCAAGGTCATTCAGGCCCAATCTTCATTATCGCTAGTCCGT ATATTCAAGTCCGTATGAGTTGCGCATTTACATTTTTTGTCTTAAGTAAA GTTTGCGGCCGAAAAAAAAATCGTTTTTTTCCGGTTCAATAACCACCGTG CGATAACCAGGCTGCACAACGGTGGGCCAAAGTTAAAACAATTTCTTCCC CTAAACCATAATGTAAATACGCAACTCATACGGACTTGAATATACGCACA AGTGCAAACGGACCCTAACGGAGAGCACGCTTGATGCGATCAATACTAAA GCCCACCTCACACTTGCGCGTATATACAAGTCCGCATGAGTTGCGTATTA ACATTGTTTAAGGTTAAGTTTGCAGCCGAAGAAGAAATTTCGTTGGTTCG AATACTAGGCTGCACGGCGGTGGGTCAAAGTAAAAAAAAAAACTTTTTCC CCGCAAACTTTACTTGATCAAGCATTATGCCCCTGTGACATGGTACTAAA AGCAACAAAGATAGATTTTAGCGTAATAGCCAAGCAGATCCATTCATCAT TCTCTTCTTCACATCAGTGGATTTAGTGGCCGGCTCAGGAACGGATATGG CTTTTATCTCCGGCGCTTTGAAGTAG

Coding sequence (CDS) from alignment at Sc0000078:289209..297484+

>Blg00426.2 ID=Blg00426.2|Name=Blg00426.2|organism=Branchiostoma lanceolatum|type=CDS|length=1446bp|location=Sequence derived from alignment at Sc0000078:289209..297484+ (Branchiostoma lanceolatum)
ATGATGGCGGACGACACTCTCGGGCGGTTAAACGCCACAGAGGCGGCCAT
CGACCAAATCAACTTCACGCTAGAAGTGTACGGCCGGAGTATGGACACAC
TGCTGCTCATCCTGTGCGCCTGCCTCATCATGACCATGCAGGCAGGCTTC
GCCCTGTTGGAAGTCGGCTCGGTCAAGGTCGCAAACACCTACGCCATCCT
GCTCAACAACGTTCTGGACGTTTGTGTTGGCACTTTAGGCTACTTCTTAT
TCGGATATGCTGTGTCGTATGGCCCAACGACCAGCGGATTCATGGGGACG
GACTACTGGGCTCTTCGCCATCTCCCGAACGATGACGCGCTGACCTGGGT
ATTCTTCCAGTACTCATTTGCCGCCACCGCCACTGCTATCGTGTCCGGGG
CTATGGTTGGTCGCACTTCATACCACGCGTACATGATCTACTCTTTCATC
ATCACCGGCTTCGTGTACCCGACAGTTGTTCACTGGATATGGAGTGGCAA
TGGCTGGCTCAACTCCGATTTGTATGGTCTCGCCTTCCAGGACTTCGGGG
GAAGCGGTGTGGTGCACACCACGGGAGGGACAGCTGCCCTGATGGGGGCA
CTCGTACTGGGCCGCAGAAAGTTGACCAAGGAGGTTGCAGAGCACGCCGT
CCCCGAGTCCTCCCCAGCCCTGGTCACCTTAGGTTTCTTCATCCTGATGG
TCGGCTTCTTCGCCTTCAATGGCAGCTCGGAGGCCCACATATCTCGCCCA
GGTGACCCTGAAGCCGTGGCCCGAGCCGTCATCAACACAGCCCTGGCCTG
CGCATCTGGTGGTGTAGCCACCCTTCTGTTTGAGCGCGTGGTTCACAAGA
AGATCAACGATTTCTATGTGCTGTGCATCGTGGCGAATGGATGCCTTGCA
GGAACTGTTTCAATCTGCGCTGCCGTCAACGTTGCGACAACGTACAGCAC
TTTATTCATTGGATCTTCCGGGGCCATTATTCACTGCCTGTGGTCCATAA
GCCTGCACAAGTTTACTCCGATCGAGGACCCCGTGGATGCCACTGCAGTG
CACCTGGCACCAGGAATTTGGGGTGTAATTATTTGCCCCTTCGTGGACAA
GAACAAGGGTATCTTCTACTGTGGCTATGCTGGACAGTACGCTGCCTGGC
GTCAACTGGGAGTCCATGTGGGTGGGCTTGTGTGCATCATCGGATACACA
GCTGTGACCACTTTCATCATCTTCACCATATTTGACAAGTTAAAACTGCT
CCGGTCGCACCAGGAGAAGTTTGAGCACGCGGAAGCCTTGCGGATTCACG
AAGAAGAGCTGGCCAAACAAAGTCACCATGGCTTCTTCCATGACGTTTTC
CATCATCATGAACATCATGAACATCATGAAGGTAATGATATTACATCTCA
TGCAGACCCAAACACATACAGTTGTCAGCACACTGTGTTAATATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00426.2-exon-Sc0000078-1570713199:289209..289672Blg00426.2-exon-Sc0000078-1570713199:289209..289672Branchiostoma lanceolatumexon
Blg00426.2-exon-Sc0000078-1570713199:290809..291125Blg00426.2-exon-Sc0000078-1570713199:290809..291125Branchiostoma lanceolatumexon
Blg00426.2-exon-Sc0000078-1570713199:292942..293083Blg00426.2-exon-Sc0000078-1570713199:292942..293083Branchiostoma lanceolatumexon
Blg00426.2-exon-Sc0000078-1570713199:293821..294044Blg00426.2-exon-Sc0000078-1570713199:293821..294044Branchiostoma lanceolatumexon
Blg00426.2-exon-Sc0000078-1570713199:294523..294664Blg00426.2-exon-Sc0000078-1570713199:294523..294664Branchiostoma lanceolatumexon
Blg00426.2-exon-Sc0000078-1570713199:295072..295251Blg00426.2-exon-Sc0000078-1570713199:295072..295251Branchiostoma lanceolatumexon
Blg00426.2-exon-Sc0000078-1570713199:295693..297484Blg00426.2-exon-Sc0000078-1570713199:295693..297484Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00426.2Blg00426.2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:289209..297484 +
Properties
Property NameValue
GeneIDBlg00426