|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:289168..297484+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00426.0 ID=Blg00426.0|Name=Blg00426.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8317bp|location=Sequence derived from alignment at Sc0000078:289168..297484+ (Branchiostoma lanceolatum)
GACAGATGTAACAATTTCTGCTAAGTTTTTCTGTATTCATTCTTTCCGTT
GTTCACTTTTCGCGAATTTCTCCTCAAGCGGCTCAAATTAGGGCGCAAAT
TGTGAGACGTTCGGGAGTCAGAACGATCCCACGTGATCAGGAACAGGTGC
CACAGAACTCACAGAACGAACAGTTAGATTCTAGAACCGACGGTTAAAGA
TACAAAAATACATTGTTCTCGATACAGTCGGAATATCCTTCATGTAAAAC
GTACTCTTACGATCGTAGGGCTGGTTTTCCACATGATGGCGGACGACACT
CTCGGGCGGTTAAACGCCACAGAGGCGGCCATCGACCAAATCAACTTCAC
GCTAGAAGTGTACGGCCGGAGTATGGACACACTGCTGCTCATCCTGTGCG
CCTGCCTCATCATGACCATGCAGGCAGGCTTCGCCCTGTTGGAAGTCGGC
TCGGTCAAGGTCGCAAACACCTACGCCATCCTGCTCAACAACGTTCTGGA
CGTTTGTAAGCAACAGGTCTTCGCAGTATCTTTTGTATTCTAACTCCTTA
CTCATGTTCGTAAAACGTAAATTCGTACCATTTGTGGTTGACTCAAGGTT
CGCACCGTTTGAGATTACAAAACATTCGTTGCGTTCCTCGCAAAATATTT
CCATCAGGACAAAGGACAAATCATATCATTTATAGACCCGCACAAATCTG
CCGAGAGTAAAGACTGTTTAATCATTTTGTCCACAGTGCAAAATGATGTG
AAAGTGCAATGGATTAGATACAACTACTGGACATCTAACACTTTGTTCAA
TCTCTTTCACATCCTTCAACATCTTGGAACACTGTGAAACATTTTTACTA
ACCCAATTTATCAATACCCTGCTTTTGAAAAGTACCATGTCTTTTTTTAA
ATTCTTTTTAAAGAAGAATTTGTCTTTGTTATACAGGCATACATGGAAAT
CATTGTTACGAATCTTTCGCTTTCAATCAATCTTTTATACATCATTCCTT
GCATTGTCTCTCCAACTTGGAAAGATTTTTAACGATCTCTTTTTTTCCCC
GATCTGGTTTTGTTAATCAGGAATAACTCTATTTTGTGTAAATTTGTTTT
CATACGCCACCAGAGCTCTCGAAGGTAATAGGAAAGTCCGGTCCGTTTTC
TTGGCATGCTGATTTTATTTTTTAAATACCCAAGCATTGTTCCGTCCTTA
TTTTTAATGGCAGTGCGCTATGTGAGAAAACGGGTTTCTCCGAGACCTAA
TCTTTGAAGGAACCTTGGGTAGAGACAGTACAGAGATGTCGAATTCAAAA
CGAAAATTGCAAGCACTAGATCTCTCAAGCTGTCAGTTCTTTGAAATGTT
CTAAATCTAGATTCTATCCCGCCAATTTTCCCTCAACAAGCGTTACAGTT
CGACTTAAGAAGAGTATAATACGCTGCCCAATTCGAAATAGCGCCTGGCT
TGTATAGTGTCAGCTTATTTTACATAGACAAGCACACTTCAAATACAATC
ATGGTTTGTGTGGAGTGTCATACTGCATATTTTACGCTCTTTATATGGTG
TTGTGTATTCTGGGATCTTATCCCTATCTCAAACATCTAAGATTGTTACA
GCTAGCACCAACGTGGTTAACATGCTGCCTTGTCTCCATAGGTGTTGGCA
CTTTAGGCTACTTCTTATTCGGATATGCTGTGTCGTATGGCCCAACGACC
AGCGGATTCATGGGGACGGACTACTGGGCTCTTCGCCATCTCCCGAACGA
TGACGCGCTGACCTGGGTATTCTTCCAGTACTCATTTGCCGCCACCGCCA
CTGCTATCGTGTCCGGGGCTATGGTTGGTCGCACTTCATACCACGCGTAC
ATGATCTACTCTTTCATCATCACCGGCTTCGTGTACCCGACAGTTGTTCA
CTGGATATGGAGTGGCAATGGCTGGCTCAACTCCGATTTGTATGGTCTCG
CCTTCCAGGTAATACCCCCATTCCACAAGGACGGCGCTCTCGCCGCACGC
TTTCTGCGACTTATCATTCAACAGAGCGCTCAACGAACTTCATAGATAAA
AACGTATATTTTACGCTTTGTGTGTTTTGCTGTCTTTTCAGCCAATACTT
TTACAGCTTGCACGATATTCCAACTATTAAATCAAGGATTAGACAAATTC
GATGTAAGTCGCAGCGAGAGCGCAACACGATCCCCGTCTAGTGGAATGGG
GGCCCAAGAAAGAGTAAATTGTTAACATTATGAAAACAAAGTGATGGGCT
GAGGTCCAAACAAAAACTATAAAAGGTACCTCAGAAAAATGTTAACGTGG
CGATATCTATTATCGTCCACTTTGGGTTATGTCCACATATAGAGGTGTAT
CATGTAAAGTATGAATATATGCTCACATGGCGTTAATCAGGCGGAAAAAA
AGATTACAGATCATTGCACCTTTAGAAGATAAATGACGTATGAAGATAAC
CGGACGATGATTGGTACCCAGGGCTCGAATTACTGGGTTCATGTGGTCTT
TTGTACACCCGAAATCGGAGCTGTGCACGTATTTTGTTTTTTACTGTGGG
TGCACTAATTAACCCCTCAATACCATGAGGAACTTGCCTTTATAATAGTA
ATAGTCTCTATTGCATATTATTGCCGCGATGGGCTAAATGCGCAAATGAT
GACCACATGTGGTATATAAGAAGCAAAATGTAAAACAAGAATTGATGAAA
TGCTACATTCTCACAATCAAAAGTAAAAAACCGACAAAATTGTGGACCGT
TATTAAACTAATGTTGATCGCCTAATAGTTTCTTCCCTTTTTGAAACACT
AAAAGAAAACTACATACTTTGCCCATCATAATTTAAATGTTCGTTCTTAC
ATGACAACAGGTATATACATATATTAAATGTGACTTGCTTTGACCTTTTT
GGCGACGCTTCAAGAAGGCACCACACAGTTATGTATTTGGTTCCAAAAAT
TCCATAGATCCCATCTATGCCGAGTTGGTATGCCCGGAATGTTACGCGTA
GTAGAAACCGGCCAAAGATTCCATGGCAGGTCAGATAAGATCTCCCGGGA
GGATCAGCCTCCCGCCCTCTCCTCCGCTGAGCAGGGTTTGGCAAACTGAC
GGGAAATTCCACCTCTGAAGTACAAGAGAAGAACTCTTTAATAAATTGAT
TTTTCGGGATTTAGGGTCATGACTCTTGTACATTGTACATAGGGAAAGTA
TATCGATTTGTATTCCTGATCGCCACGTTATTTCCGTGTGTGAGGCAGCC
CGTTTCCTTGACCGCTCATATGGCTCTGTTTAGAAATTACCGTCACCGAT
GTGTTACTTCTCTGGACCAATCACCAATACTGTCTCTCTGCTCAGAATGG
AACTCCAGGCAATTAGCCTGTCTGAAGGATGGTTTGAATCAAGGATTCGA
ATTCATCAATAAATTAGTGGAAAAGTCAAAATGTCAAATGTCTCTTGGCT
GTCCAACAATAAGTAGCCACATTTTAACCATTAGCCATGCGGCCTGGCAC
CTAAGTTGCAATGTGTCAAAACATAGCTTTAAAATGTTAATCATAGACAC
GTCTTATATATAGCCACTCAATCGTCGCCATGGCAATACGTTTTAATGCC
TTTTTTGTTGTAGATTTCTTGTCTACTTTTATTGTCTTCAACAGCGGTTG
ACGCTCATCTTCATATAAGGAACAATCGAATAAAAAGTGTGTCTCATTTA
CAACACATAAGTGGTCATAGAATTTGCATGTTCTTTTATAAACAATAGTT
TTACACTGATCATGTATTATTTAGGACTTCGGGGGAAGCGGTGTGGTGCA
CACCACGGGAGGGACAGCTGCCCTGATGGGGGCACTCGTACTGGGCCGCA
GAAAGTTGACCAAGGAGGTTGCAGAGCACGCCGTCCCCGAGTCCTCCCCA
GCCCTGGTCACCTTAGGTGAGAGAAACAATAATCGTATAAATGATGTTGT
ATTTCCTGTAGTTATGATTGACTGTTGCTGAGTCGTGATTTATAGATTAT
GTATTACATACCTGCTTCAGACCTCTGCTCATTACTTTATCTTGTAATGC
GCATGGATACGTTTGAGCTCGGGGACCACTTGAAATATACCAATGATGTG
AATAGAAGTAGAAACTGTATAATTGCTCCTTTGTCAGCCATTTTACGACC
ATTGATTATACATTTTATCTCAAACTGCCCCTTTAATGATAGGTAAAGAA
AAAGCTTTTTATAGAAGCCACCACAACTTACCACAACTTCCAAACGTTTA
CTGGCAAAAAGAAAACAAGAACACTGTTAACCTCTCAAAAACTTTTCTCC
AAGCAGATGTTTCGGTCGAGAAGGGTAGGAGTGCCCGGGATTCCCGGGAT
TCCCGGACACTCCTACCCTACTCGACCGAAACCTCTGCTTGGAGAATACA
AAAACCGTCGATTGTATTCCGTAGTAGTTCTTTGAATAGCCATTTGTTCC
ACTTGTCAAGATTGTCAACTCGCACTGTCTGTACTGTTTGCCATTTATAT
ACATTGCTTCATGTTGCAATTAGACCTCGGCCAAAATTGTAAATAAAACA
CTTATTCTCTGAAATGGAATTTGTCAGATAAAATCATTTATTTATGTAAA
AAGTACAAAAGCTGTTGACTAATACTGACCCGTGGTCTGCTGCTGACGAA
CAGGTTTCTTCATCCTGATGGTCGGCTTCTTCGCCTTCAATGGCAGCTCG
GAGGCCCACATATCTCGCCCAGGTGACCCTGAAGCCGTGGCCCGAGCCGT
CATCAACACAGCCCTGGCCTGCGCATCTGGTGGTGTAGCCACCCTTCTGT
TTGAGCGCGTGGTTCACAAGAAGATCAACGATTTCTATGTGCTGTGCATC
GTGGCGAATGGATGCCTTGCAGGAACTGTAAGCTCAGCTTGTACCTAAAT
GCACTACACGGCAGGGATTCTCACACTAAGAGCCCTGTCACACATGCGTA
TATTCAAGTGCGTATGAGTTGCGCATCAACATTTCTTTGGTTTAATAAAG
TTTGAGGGGAAGAAGTTGTTTTTCACTTTAACCTACCGTTGTGCAGCCTG
CTTATCGAACCAAAGAAATGACTTCTTCGGCTGCAAACTTAACCTAAACC
AAAAACATGTTCATCCGCAACGGAATTGAAGTGTGACAGGAGCTTTACAT
GTTGCTGTGCCACAGGAAAGATTTTCTGTGTACTTTTCGTTTGACGGTGA
AGGCAAAAGAAACCAAATAAATGATCAAAGATCTCTTCCCCACGACTAAT
GTAGTTTGTTCCTTAAAAGTTGTGTATTCTGCATATGTTTAAATCAAGAG
CATGATTTCCATCGGACCATGCCTGTAAGCAAAAATGACCCTATATTTCG
TCCAGGTTTCAATCTGCGCTGCCGTCAACGTTGCGACAACGTACAGCACT
TTATTCATTGGATCTTCCGGGGCCATTATTCACTGCCTGTGGTCCATAAG
CCTGCACAAGTTTACTCCGATCGAGGACCCCGTGGATGCCACTGCAGGTT
CGACAATTACATGAATGTAGCAACAAATATTCTCAGACTCATCTAGTCCT
ATTGTTACATGTCAATATCATAGATTATCATTGTCACTTACGCTATACAT
GTTACATTTTCTATGTAGTCCTGCTGATGAAAAAATTAAGAAAATGCATC
ATGTAAGAAATACACGCTCCAAGGGCTGGGGATCACCAGAACCGACTGGA
GGGTCTACGCCGAGAGTAGACAAACCTGGCGTGATCTAGCCACGCATGTC
TGTAGCCGCTATGTATCAGTTCCCGATGCTCGCGAATGATTGATTGATTG
ATCATGTTCTATACATAAATCAACTCCAGTTTTACAGGCATGTGGTATCA
GGTAGTAGAGATAGCAAAGCAGTCTAATATAATGACCCCTGTATATTCCC
ACAGTGCACCTGGCACCAGGAATTTGGGGTGTAATTATTTGCCCCTTCGT
GGACAAGAACAAGGGTATCTTCTACTGTGGCTATGCTGGACAGTACGCTG
CCTGGCGTCAACTGGGAGTCCATGTGGGTGGGCTTGTGTGCATCATCGGA
TACACAGCTGTGACCACTTTCATCATCTTCACCAGTAAGTTCCTCTGGTC
CCCTCCTGCTGAACTTGAAATCCAAACTTTCCCCACACCGATCTTAGATA
AGCAATGGTTGATATAGATGAAGTATAGAATAAGGTGATATTCTTGTTCA
ACGTGCCCTTAAAAATTTACCCTCAAACGTAGCCATGAAACGCATCATGT
AGCAAAATTAGACCCCCATTCCACTAGACGGTGCTCTCACTGCGACCTCG
AGGCGACTTAAGGCGGATTTGTGTTACCTTTGATTCTATAATTGGAACAT
CATGCAAAATGCAAAAGTATGACTGAAAGCACAATGATACACACAAAGCG
TAAAAAATATTTGTTCTTTTTCTGCGCAATTCATTGAGAGCTCTGGTCGC
AGAGAGCGCGGCGAGAGCGCCGTCCTAGTGGAATGCGGGCATTACCAATG
AAGCCTTCTGAATTTTCTTTTTCAGTATTTGACAAGTTAAAACTGCTCCG
GTCGCACCAGGAGAAGTTTGAGCACGCGGAAGCCTTGCGGATTCACGAAG
AAGAGCTGGCCAAACAAAGTCACCATGGCTTCTTCCATGACGTTTTCCAT
CATCATGAACATCATGAACATCATGAAGGTAATGATATTACATCTCATGC
AGACCCAAACACATACAGTTGTCAGCACACTGTGTTAATATGAATTCTCT
CATCATGTTGCATACAAATCATTATTTTGGTCATTGGATTATACGTTTCA
GATTAACAGTAATCCTTTTTGTAGAAATCCCTATGGGCTGATTGGACTAA
TTACACAATGTATCTGAAAAGGATAAGGGTGATGACTGAATTTTCTAGAA
TTGTAATTAATCAAGAAGAGATTTTGCACCATGGCCAAATGCACACAATG
TGCTTCTAGTCGCTCTGTCCAGTATAGTTTTTCATACTTTTTCATAACTT
CCTCAGCTGCACCTGCACCGAAGAAGAGCGTCTCCTCTGCATTTGATGAT
GCTGTAAGAACAAGCGAGGCTGATGTGGTCGTCACGGTTAACTCTGGGCA
GTCTCTGGACGGGTCTGTGATCAAAGAGAGCGTGTTTTAGACGATTTACC
AGCACGACTGGCAAATTCTTGCAGCATCAATGAATAATGTTCCGTCTGTT
TAAACTACAACATTTTTTTTTACTCGGAAACACTATTCAATAAAATCTCC
CCTGCTGCTGCAACCTTAGTCCGCTTACACATTTTTTCGCGAGATATTTT
CTTACGTGAAGCTGGTATGGCCATGTTGATTTGATTATGTGGATGACATC
CGTGCGCGCATCAATTTTCGCCCGTTTAAAAAAGTTTTCGGCCATACTGT
AAATTATACAAAGCAGCTGCAAAATAAGAAAATCCATGCTGTGAATATGT
AGGAAAACGAAAACTTATGTCGTAAAATGCCAAAGTCATGTAGAAGATGT
GAAATAAGAAAAATCTATTATTCGGTATACTATACACTGTGTGGTAAGTT
TCGTTCAACCTTTCTGACCACGTAGATTTCAGATTGAAGGCAACTTTTTT
TGCTAAACTCTTTTCTAAATTTGCACGTTCTCATCAGTTTTGAGATTCCC
AGAAGATGTCATCCATATAATCAAATCAACATGGCCTAACGTTAAATGTA
GCAAGGTCATTCAGGCCCAATCTTCATTATCGCTAGTCCGTATATTCAAG
TCCGTATGAGTTGCGCATTTACATTTTTTGTCTTAAGTAAAGTTTGCGGC
CGAAAAAAAAATCGTTTTTTTCCGGTTCAATAACCACCGTGCGATAACCA
GGCTGCACAACGGTGGGCCAAAGTTAAAACAATTTCTTCCCCTAAACCAT
AATGTAAATACGCAACTCATACGGACTTGAATATACGCACAAGTGCAAAC
GGACCCTAACGGAGAGCACGCTTGATGCGATCAATACTAAAGCCCACCTC
ACACTTGCGCGTATATACAAGTCCGCATGAGTTGCGTATTAACATTGTTT
AAGGTTAAGTTTGCAGCCGAAGAAGAAATTTCGTTGGTTCGAATACTAGG
CTGCACGGCGGTGGGTCAAAGTAAAAAAAAAAACTTTTTCCCCGCAAACT
TTACTTGATCAAGCATTATGCCCCTGTGACATGGTACTAAAAGCAACAAA
GATAGATTTTAGCGTAATAGCCAAGCAGATCCATTCATCATTCTCTTCTT
CACATCAGTGGATTTAGTGGCCGGCTCAGGAACGGATATGGCTTTTATCT
CCGGCGCTTTGAAGTAG Coding sequence (CDS) from alignment at Sc0000078:289168..297484+ >Blg00426.0 ID=Blg00426.0|Name=Blg00426.0|organism=Branchiostoma lanceolatum|type=CDS|length=1224bp|location=Sequence derived from alignment at Sc0000078:289168..297484+ (Branchiostoma lanceolatum)
ATGGGGACGGACTACTGGGCTCTTCGCCATCTCCCGAACGATGACGCGCT
GACCTGGGTATTCTTCCAGTACTCATTTGCCGCCACCGCCACTGCTATCG
TGTCCGGGGCTATGGTTGGTCGCACTTCATACCACGCGTACATGATCTAC
TCTTTCATCATCACCGGCTTCGTGTACCCGACAGTTGTTCACTGGATATG
GAGTGGCAATGGCTGGCTCAACTCCGATTTGTATGGTCTCGCCTTCCAGG
ACTTCGGGGGAAGCGGTGTGGTGCACACCACGGGAGGGACAGCTGCCCTG
ATGGGGGCACTCGTACTGGGCCGCAGAAAGTTGACCAAGGAGGTTGCAGA
GCACGCCGTCCCCGAGTCCTCCCCAGCCCTGGTCACCTTAGGTTTCTTCA
TCCTGATGGTCGGCTTCTTCGCCTTCAATGGCAGCTCGGAGGCCCACATA
TCTCGCCCAGGTGACCCTGAAGCCGTGGCCCGAGCCGTCATCAACACAGC
CCTGGCCTGCGCATCTGGTGGTGTAGCCACCCTTCTGTTTGAGCGCGTGG
TTCACAAGAAGATCAACGATTTCTATGTGCTGTGCATCGTGGCGAATGGA
TGCCTTGCAGGAACTGTTTCAATCTGCGCTGCCGTCAACGTTGCGACAAC
GTACAGCACTTTATTCATTGGATCTTCCGGGGCCATTATTCACTGCCTGT
GGTCCATAAGCCTGCACAAGTTTACTCCGATCGAGGACCCCGTGGATGCC
ACTGCAGTGCACCTGGCACCAGGAATTTGGGGTGTAATTATTTGCCCCTT
CGTGGACAAGAACAAGGGTATCTTCTACTGTGGCTATGCTGGACAGTACG
CTGCCTGGCGTCAACTGGGAGTCCATGTGGGTGGGCTTGTGTGCATCATC
GGATACACAGCTGTGACCACTTTCATCATCTTCACCATATTTGACAAGTT
AAAACTGCTCCGGTCGCACCAGGAGAAGTTTGAGCACGCGGAAGCCTTGC
GGATTCACGAAGAAGAGCTGGCCAAACAAAGTCACCATGGCTTCTTCCAT
GACGTTTTCCATCATCATGAACATCATGAACATCATGAAGCTGCACCTGC
ACCGAAGAAGAGCGTCTCCTCTGCATTTGATGATGCTGTAAGAACAAGCG
AGGCTGATGTGGTCGTCACGGTTAACTCTGGGCAGTCTCTGGACGGGTCT
GTGATCAAAGAGAGCGTGTTTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00426.0-exon-Sc0000078-1570713199:289168..290291 | Blg00426.0-exon-Sc0000078-1570713199:289168..290291 | Branchiostoma lanceolatum | exon |
| Blg00426.0-exon-Sc0000078-1570713199:290809..291125 | Blg00426.0-exon-Sc0000078-1570713199:290809..291125 | Branchiostoma lanceolatum | exon |
| Blg00426.0-exon-Sc0000078-1570713199:292942..293083 | Blg00426.0-exon-Sc0000078-1570713199:292942..293083 | Branchiostoma lanceolatum | exon |
| Blg00426.0-exon-Sc0000078-1570713199:293821..294044 | Blg00426.0-exon-Sc0000078-1570713199:293821..294044 | Branchiostoma lanceolatum | exon |
| Blg00426.0-exon-Sc0000078-1570713199:294523..294664 | Blg00426.0-exon-Sc0000078-1570713199:294523..294664 | Branchiostoma lanceolatum | exon |
| Blg00426.0-exon-Sc0000078-1570713199:295072..295251 | Blg00426.0-exon-Sc0000078-1570713199:295072..295251 | Branchiostoma lanceolatum | exon |
| Blg00426.0-exon-Sc0000078-1570713199:295693..295845 | Blg00426.0-exon-Sc0000078-1570713199:295693..295845 | Branchiostoma lanceolatum | exon |
| Blg00426.0-exon-Sc0000078-1570713199:296174..297484 | Blg00426.0-exon-Sc0000078-1570713199:296174..297484 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000078 | genome | Sc0000078:289168..297484 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00426 |
|
