Blg00410.4 (mRNA) - B. lanceolatum

Overview
NameBlg00410.4
Unique NameBlg00410.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:458881..466078+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00410.4 ID=Blg00410.4|Name=Blg00410.4|organism=Branchiostoma lanceolatum|type=mRNA|length=7198bp|location=Sequence derived from alignment at Sc0000078:458881..466078+ (Branchiostoma lanceolatum)
GTCTCGTCGGGCGGGTTTTCAGTCCCTTCTCTAATCGTAATTTGTTCTCA GTTGTTTATCTGAACTCAAATCTAGGATACTCGACGTTGAATAGGTAAGT CTGAGTTAAAACAGCGTTTCTTGTGTACGTTAGAGCTTTTATGATCAAGC AGTTAAGTTAAAATGTCGATGCAGAGAGGCTGGTGTGAGCACACGCCATC GTCGATTAACTGTCCCCATGACATCTAGTATTCTCTTATTCGTAGTATCT GGAGTGTGAGACATAGCCGGTAATGAACTGCGGCCTCGCATCAACTTGCT TTCACATTGTGACAGATAATCATATATGCAGACACATACACTCTTATAGA CATACAGACGGGCTAATAACTTTTGGGTGGGGATGGGGCATTAACAATAA CTTATTAGCTACATACCAAGATGTTACCTTGAATGGCCAAGAAGTACAGT ATACGTATACCAGCTGCAAACTGACATGGCTTAGTCACACATGACGGACG GGAGATGGGTCTTGGTCACATTTGGCTGACGGCCTGGGCGTGACAGTGTA GGCTTTGATCGATGGAAAAAGCTACTACAGTAATGATGTATTCTCCATAT GCTACTTACGTTCACCATACGGTCACGACAAGTGTCAATCAAAACCTTAT TTTCATATTATATTAGATCACGTTCATGCCAGCTTGACAACATGGCGCAT GCGCGGGAGTACAATGGCGGGAGATAAAGAAAGCTTACCCATTGGTCGAA CCAAGATCGAACTGTGTATTGTCAACATCAACCTAATTGTGATCGGCTGT CTCGTCGGGCGGGTTTTCAGTCCCTTCTCTAATCGTAATTTGTTCTTCGT TGTTTATCTGAACTCAAATCTAGGATACTCGACGTTGAATAGGTAAGTCT GAGTTAAAATAGCGTTTCTTGTGGACGTTCGAGCTTTTGTGATCAAGCAG TTAAGTTAAAATGTCGATGCAGAGAGGCTGGTGTGAGCGCACGCGATCGT CGATTAACTGTTCCCATGACATCTAGTAAGTATTCTCTTATTCGTAGTAT CTGGAGTGTGAAGCTCAGTGAGGCATGAACTGCGGCCTCGCATCAACTTG CTTTCACATTGTGACAGATAATCATATATGCAGACACATACACTCTTATA GACATACAGACGGGCTAATAACTTTTGGGTGGGGGTGGGGCATTAACAAT AACTTATTAGCTACATACCAAGATGTTACCTTGAATGGCCAAGAAGTACA GTATACCAGCTGCAAAATGACATGGCTTAGTCACACATGACGGACGGGAG ATGGGTCTTGGTCACATTTGGTTGACGGCCTGGGCGTGACAGTGTAGGCT TTGATCGATGGAAAAAGCTACTACAGTCATTGTTCGTTGAGGTACTATAT TTGGTCTGTGTTTTTTAAATTATGTATTTTATTTTCTATATGCTACATAC GTTCACAGCGTCAAAAAGTGTTAATCAAAACCTTATTTTCATATTATATG AGGTACAATTAAACAAGACATGAGGAAAGGTCTAAATATTTCACGGAGGT ATGAGATCTTCTAACATCACCCCCTCCTCGTTATAACTGGTTTGTTTCTT CCCTTCTCTGATAAATTGTTCAATGCAGTTATGTGTATTCACATCCAGAT ATTTTGTGCCTACCGGACTTCTCCAGACAATTTGTATCTTATGACAGAAT TGCATATATGTATATAACACATATTCAGATGCATGACATAATACACAAGG ATCACAAGAATATACAATTTAGAAACTCAGAACCAGTCCTAACTCTAGTC CTAAAGTCCATTTCTAACAGTCAATAGGCAATAAGTTTTCTTTGTTGTGT TGGAAGTTCATTCTAAAGTACCCGACCCGTGTGCGTCAGACTTCTCTAGA AACGCTTATGCATTAGTTACATTAAAACATAGAAATCTAAAAGTTACTTT AAAACATAGAAATGCAGAAGAACTAACAACGGTCCAGTCACCTTTTTTTT TAAATCTGTTGAAGTGCAATGTATTGATGGACAGCCGCGATCGCCCTTTG TAGACGGACGGGAGATGGGTCTTTCAAAATAAGATTCCAAAAGAATTGAA TCATCACTCGCAGTGTAGAGTTTCTATTTTTTGTATTTCTCTCTGAAAAA GTCTTTATCTCTCCTATCTGTTGTTTCAGTACATATCGCAATCTGCCTGC ATCAGTTAAAAAAGATCATGATCACCTGGTAGCCTAAATAATGCCTGGAT GTACATCTTCACAAAACATAAACGTATTCCACACAAAGATTGAATTTACC AACAGCGTCCAATAATTGGTAAGTCTGAGAGGAACGTATTGGAATGGTCA CTAATTAGATTTTGCAACAGTGCTCATGATCAAGTTTGTGTGTTTTCTTT TCTTTTACATCATACTTTTCGTTCCCGCAAAACTGGTTGGGAATTGTGAC CTAGGCATTACGTAGGATACATTGCAATTGCAATTTGGTTGATTCGCTAT ATCTTGTTCTCAAACGATTTCATGTACTTCATAGCTTTCACTTCAGGTTC AAACTTTCAAACATGTCTGTCCCACGTCTGTTGTAGCAGAAAACATGTTG GCAGAAACGACTACATCCCTAGACACGTACCTCAACCCCAACTCGACCCC AGAAGAGACGGCAAAATGTTACGACAACTGGTCCGGGAACTATGAAAAGG TGTGTACCTGAATGATGTGCTAGCTATAGAAACAAGCAAAAATGATAAAA AAAGCAAACAAATATACCGGAGATCTTATTACTGTAAAAGGCAAAATGTT CACGGGGATTAATTTCACGGTAGGGAGAAAATGGAGTGTTCGCTGTGGTT TTAGGTTTGCGGTTGAAAGTACCATGAAGGGTTTTAATTACTGTGAAAGG AGAATGTTCGTGGTGGTTTAAAGTTCTCGGTGAAGAGTATTCTCCAAGCA GAGGTTCGGCTCCGTCTATTTTTTATGTGTTTAGGCATTTTCTACGTACC AGCAAAGAAAATTCTGGATTTCAGAAGTGACAATAAGCTGATAGCTTATT GAGATATGCATTTTTATACAGTTTCAGTCTCCTACAATGGTTTTAAGTGG TTCAGGAAATGGTTCTAAATGAACCTTNATGGACCTTGTAGGACTATGTG CTTCTGATGGACATTCAATGGGGTGGTCAACTTGAAATAAACTCAGTGGT TCATAACAATCAATTGAGCTATTTTAGTCTCAAGATCATAATGTTCCTTT GCCAAATATCAACTCATTCGGTGGAAAAATTAACCTGTTTTAGAACCACT TGTATTGCTGTTTGGTTCACCCTTGTTACTGATGAATGACGTCAGCTGTT CAGTCAGGACTGATAGACATGATCCACCAACATATTAACACAGGGTAGAC CCCGATTTTTCTCGAAAATTGATTTGGGATCTTTAACGTAGTTAGCTGAC GCGCGACTCTTCTCAAAAACGGGATCTCTGCTTTGGACTTCCCATTGGCA TTGGAAAAACTATAATTTACCTCAAGCGAACGAATAAGTACAGTAGATCT AACTCGTGCCAGTCAAACTCAAGTTATGTCAAAACGTTTCATATAAATAG TTGATACAATACGTTTAGTTGAGTGCACCACCAATACATATGTTAAAAAA ACGGAACGCCAAGTCGAGCTCCGTCCGCGGCGGGCCCCGTCCTTGGTGCT GAAATGGGGGTCCCTCGCTCCTACGTCCTCCTCCGCCGAGTGAGTCAGTC AGTCCGTCCGATGAACGAGCGACGGAGGAGGCGTCCCGAGGTGGTCGGGC AAGTTCGGCTCAGCCCCGTGCCTGGTGGGCAGGAGTAAACCCAAGGGTGG TAGGCAGAGGACGCTCCGGTCTGGCATGTCATTGTGACGTCACGGCTCCC AGAATCATGCTTTAGATATCTATCCTAAAGCAGATGGCGGTGAAGTTCGT TAAGTTTAGCCGCCCCAAAATCGGAGAATCCTAGCTATAAGAAAAGCGGT GTAGTCACCAGTAAACCTTGCGATCTTAATCTTCGAAACCGACATCTGCT TGGAGATTGATTTATGCCGTCTCTCTCAACAGGAGTTAATGACGCAGCTG AAGTGTACTGCTCCCAGAGTGTGCGCCGACGCTATGGAGAAAACTATGGG CGGCTCAAACCGCAAGGAGGTCCGTATTCTTGACGTGGCGGCCGGGACTG GACTGTGCGCGGAAGAGGTTAGGTGGTTCAAGTGATAATCTGGTTTACGG TTAGCCCCAGCTGGGCATGATCGTCTGAGCCCCTTCCTCAGAAACACTTC TTGTCTAGACCATGCTTGATATATGATGTTCAGACGGCTTTTTTCATGTC TCAGCGGATGTCAAAGTAAAGTGCTTTTCAACGCGCGCTACCACAGTCAA TTTTTTCATCAGGGCATGATGAGGTACATGTATGCTACTCCTTGCCACAT GGTGGCGTTACAACGGTAAGAAGGATGATGTCTTGAAAGTTGTCACCCTC ATTAAAACAGGACCCCCATCGCTCCACGTTACATCGCTCGCGAAAGGGGC CCTGATAACCACCGCCACCAGACATGGTTCTGGCGACGTCGCCGACACTT GCTCATGAATAATTAATGAGCTGGCCTTATTTGGCAATGAGCGGACTGAC GAACTCATCTCCAGACGGAAGTCGCGGACAAGGTCGGTGGGCTTGCTCGG CTTTCGCTGCCGCTGGGAAGCCCATATAACAGAGGCTCTTCCCTCCGCCT GTCCTTACACTTAGAAATATGTCCCTGTCATCAAGCAGTGTCTGTAGGGT GGACTGCTGATGCTGACGAAGCCGCTCTAATCCAAACAAGTCTTCCACAG CTGAAGCAAAACTATCGGCTGCCATTTGTTTTGGGTAACCAAAGCAACGA TGTTATAATCACCCGTAACCTGATTGGTTGATAGCTTCCCAGCGTTCTTT GCGCGTTTGCTACCGATGAGGGGAAGCAGGTGACGTCGCCAGAACCGTGT CTGGCGGCGGTGTTTATCAGGGCCCCTTTCGCGAGCGATGTAACGTGGAG CAATAGGGGTCCTGATTTATTGAGGGTGTACCGCTGTACACTCCGATGAA AGCAGCCAAGACGTCCGTGAAGGCGTTGGCTGCGGCTGTGTAGAAAGAAC TAAGCTTATCAATAACTTACCAAGCTACTCACATCGATATTATTTCACCA TGCGGCAAGAGGACAATTCAGGCTCTGTAGCTGTGTAATGCTTAGGTCCC AATTGAAACAAGAGTCCGTAGGACACAATCTTCCGTGAAGTAATAATGGT ATGTGCGGTGTAGCTTACCCTAGCCGGCTGATAGTTACAGGGTTGGCTGA TAGTTACGGGTTGGCTGCAAAAAGTGCATTATTTAGCCCCCAAAAAAGCC GGTTCAGAGCCTGCAACGGAGGCTATCTCTTGCAGTCATTCTATTAATTC GATCGATTGATTTATTATTCCTTAGCTGGTGAAGAAGGGATTTACCAACA TAGACGCGGTAGACGGGAGTCAGGGAATGCTGGACCTTGCCGAGAAGAAG CAGATCTACCGCCGACTCATCTGTGACTTTGTTGGACCGAACCCCCTGGA CATCGAAAACAGTAATTGTCGTATTTCACAATGTCTAACAACCAACAAAA CGAATCAAATCCGAAATCTTGAAAACTGGCAAAAGGAACACTTGATAAGC TTTCCTTTTTTTAACTAAGAAAAACTGGACAGGTCTTAGTACGTACCTAC AAACGGCATATACACGGAGAGATCATATGAATCTCTCACAGATTCCAAAC TTCTGGAATACATAGGTTTAGATCAAACCGTATATTCTAACTGAAAAACA ACTGTTCCCTTCATAGACACATATGACGCCATTGCCTGCTGTTCTGCGTT CGCCGCGGGTCACCTGAAGGAAGACTGACAACCTGAGCTCATACGGGTCG TCAAACCAGGTGAGCTGCAGGTCTAGATTTCAGATAAGCCTCATCTAATG TCAAACCGGTGCAATGATCAAGGGNTATGAATCTCTCACAGATTCCAAAC TTCTGGAATACATAGGTTTAGATTAAACCGTATATTCTAACTGAAAAACA ACTGTTCCCTTCATAGACACATATGACGCCATTGCCTGCTGTTCTGCGTT CGCCGCGGGTCACCTGAAGGAAGACTGTTTACCTGAGCTCATACGGGTCG TCAAACCAGGTGAGCTGCAGGTCTAGATTTCAGATAAGCCTCATCTAATG TCAAACCGGTGCAATGATTTAGCGCTAGAGTATTTGCCCTACATTGGTTC GTTCTGATTGCGGCTGCATGGTGTTCTGACCACTGCAGCAGCAGAACACA GTGGGCTACTACTACTACTATTGGTTCAAAACCTCTGCCGGGTATCATAC ACATAGAATATGGCACCGTTTCGTCTGCTTAAGCCGGCGTCACAATTCAT GCGAGCGTCGGCCGAACTTGTAGTTCGCCCGTAGCTCGCCGAATGTCAAA ATCGCCCGAGCGTCGACCGTATTTGCCAATGAAAATCTCGGGTGACTTCC GTCAAACACTAAAAATCCCCCATGAGATGGTACCATCTCTTGGACATGGA CAAAGTCAGAATCGACTAACCTGGTAAAAGGCCAATATTTGGATCAACTT TGATTTCTGAAAATCGCCCGAAGTCCGCATAATCGACAGAACGTCGGCCG TACTTCGGCCGAAAATGCACATTTGAAGCTCACCAACACGTCGACCGAGC TGAATTTCTTATTTGTGACGGGGGCTTTAGCACTTGGGAGAATGAGTATG GGAGTTCAATTCTCTACGCTGCAAGTGGACTAACAATGATTATAGAAACG TAGGGGGTGGTGTATTTCGTTGTTACCTCCATGAAGAATGGAGGTATTGT TTCGGGCGCTTCTGCGTGCTTGTGTTTGTAACATGTAAAATGAATAGCCC CAAACCCCCGTAATGCGAAGTGACAAACACCCTAATCGTCCATTTCCTCA TTTCCAGGCGGCTACATCGTCATCACGTTCCGCGAGGAGTGGTTGCACCA TTACGAGGATTACAAGGATAAGCTGGAGCCCGCCATGGCCCGCCTGCAGG ACAAGGGGCTCTGGGAGCGAGTCAGCCGGGAGGTACCGGTCTTTCCCAAC TTCTACCCAGGCAAGAACGGGATAACCATCGTCTACAAGGTCCTGTAG

Coding sequence (CDS) from alignment at Sc0000078:458881..466078+

>Blg00410.4 ID=Blg00410.4|Name=Blg00410.4|organism=Branchiostoma lanceolatum|type=CDS|length=660bp|location=Sequence derived from alignment at Sc0000078:458881..466078+ (Branchiostoma lanceolatum)
ATGTTGGCAGAAACGACTACATCCCTAGACACGTACCTCAACCCCAACTC
GACCCCAGAAGAGACGGCAAAATGTTACGACAACTGGTCCGGGAACTATG
AAAAGGAGTTAATGACGCAGCTGAAGTGTACTGCTCCCAGAGTGTGCGCC
GACGCTATGGAGAAAACTATGGGCGGCTCAAACCGCAAGGAGGTCCGTAT
TCTTGACGTGGCGGCCGGGACTGGACTGTGCGCGGAAGAGCTGGTGAAGA
AGGGATTTACCAACATAGACGCGGTAGACGGGAGTCAGGGAATGCTGGAC
CTTGCCGAGAAGAAGCAGATCTACCGCCGACTCATCTGTGACTTTGTTGG
ACCGAACCCCCTGGACATCGAAAACAACACATATGACGCCATTGCCTGCT
GTTCTGCGTTCGCCGCGGGTCACCTGAAGGAAGACTGTTTACCTGAGCTC
ATACGGGTCGTCAAACCAGGCGGCTACATCGTCATCACGTTCCGCGAGGA
GTGGTTGCACCATTACGAGGATTACAAGGATAAGCTGGAGCCCGCCATGG
CCCGCCTGCAGGACAAGGGGCTCTGGGAGCGAGTCAGCCGGGAGGTACCG
GTCTTTCCCAACTTCTACCCAGGCAAGAACGGGATAACCATCGTCTACAA
GGTCCTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00410.4Blg00410.4-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00410.4-exon-Sc0000078-1570713199:458881..458974Blg00410.4-exon-Sc0000078-1570713199:458881..458974Branchiostoma lanceolatumexon
Blg00410.4-exon-Sc0000078-1570713199:461470..461579Blg00410.4-exon-Sc0000078-1570713199:461470..461579Branchiostoma lanceolatumexon
Blg00410.4-exon-Sc0000078-1570713199:462963..463097Blg00410.4-exon-Sc0000078-1570713199:462963..463097Branchiostoma lanceolatumexon
Blg00410.4-exon-Sc0000078-1570713199:464356..464491Blg00410.4-exon-Sc0000078-1570713199:464356..464491Branchiostoma lanceolatumexon
Blg00410.4-exon-Sc0000078-1570713199:464997..465089Blg00410.4-exon-Sc0000078-1570713199:464997..465089Branchiostoma lanceolatumexon
Blg00410.4-exon-Sc0000078-1570713199:465888..466078Blg00410.4-exon-Sc0000078-1570713199:465888..466078Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:458881..466078 +
Properties
Property NameValue
GeneIDBlg00410