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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000078:458885..466078+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00410.3 ID=Blg00410.3|Name=Blg00410.3|organism=Branchiostoma lanceolatum|type=mRNA|length=7194bp|location=Sequence derived from alignment at Sc0000078:458885..466078+ (Branchiostoma lanceolatum)
CGTCGGGCGGGTTTTCAGTCCCTTCTCTAATCGTAATTTGTTCTCAGTTG
TTTATCTGAACTCAAATCTAGGATACTCGACGTTGAATAGGTAAGTCTGA
GTTAAAACAGCGTTTCTTGTGTACGTTAGAGCTTTTATGATCAAGCAGTT
AAGTTAAAATGTCGATGCAGAGAGGCTGGTGTGAGCACACGCCATCGTCG
ATTAACTGTCCCCATGACATCTAGTATTCTCTTATTCGTAGTATCTGGAG
TGTGAGACATAGCCGGTAATGAACTGCGGCCTCGCATCAACTTGCTTTCA
CATTGTGACAGATAATCATATATGCAGACACATACACTCTTATAGACATA
CAGACGGGCTAATAACTTTTGGGTGGGGATGGGGCATTAACAATAACTTA
TTAGCTACATACCAAGATGTTACCTTGAATGGCCAAGAAGTACAGTATAC
GTATACCAGCTGCAAACTGACATGGCTTAGTCACACATGACGGACGGGAG
ATGGGTCTTGGTCACATTTGGCTGACGGCCTGGGCGTGACAGTGTAGGCT
TTGATCGATGGAAAAAGCTACTACAGTAATGATGTATTCTCCATATGCTA
CTTACGTTCACCATACGGTCACGACAAGTGTCAATCAAAACCTTATTTTC
ATATTATATTAGATCACGTTCATGCCAGCTTGACAACATGGCGCATGCGC
GGGAGTACAATGGCGGGAGATAAAGAAAGCTTACCCATTGGTCGAACCAA
GATCGAACTGTGTATTGTCAACATCAACCTAATTGTGATCGGCTGTCTCG
TCGGGCGGGTTTTCAGTCCCTTCTCTAATCGTAATTTGTTCTTCGTTGTT
TATCTGAACTCAAATCTAGGATACTCGACGTTGAATAGGTAAGTCTGAGT
TAAAATAGCGTTTCTTGTGGACGTTCGAGCTTTTGTGATCAAGCAGTTAA
GTTAAAATGTCGATGCAGAGAGGCTGGTGTGAGCGCACGCGATCGTCGAT
TAACTGTTCCCATGACATCTAGTAAGTATTCTCTTATTCGTAGTATCTGG
AGTGTGAAGCTCAGTGAGGCATGAACTGCGGCCTCGCATCAACTTGCTTT
CACATTGTGACAGATAATCATATATGCAGACACATACACTCTTATAGACA
TACAGACGGGCTAATAACTTTTGGGTGGGGGTGGGGCATTAACAATAACT
TATTAGCTACATACCAAGATGTTACCTTGAATGGCCAAGAAGTACAGTAT
ACCAGCTGCAAAATGACATGGCTTAGTCACACATGACGGACGGGAGATGG
GTCTTGGTCACATTTGGTTGACGGCCTGGGCGTGACAGTGTAGGCTTTGA
TCGATGGAAAAAGCTACTACAGTCATTGTTCGTTGAGGTACTATATTTGG
TCTGTGTTTTTTAAATTATGTATTTTATTTTCTATATGCTACATACGTTC
ACAGCGTCAAAAAGTGTTAATCAAAACCTTATTTTCATATTATATGAGGT
ACAATTAAACAAGACATGAGGAAAGGTCTAAATATTTCACGGAGGTATGA
GATCTTCTAACATCACCCCCTCCTCGTTATAACTGGTTTGTTTCTTCCCT
TCTCTGATAAATTGTTCAATGCAGTTATGTGTATTCACATCCAGATATTT
TGTGCCTACCGGACTTCTCCAGACAATTTGTATCTTATGACAGAATTGCA
TATATGTATATAACACATATTCAGATGCATGACATAATACACAAGGATCA
CAAGAATATACAATTTAGAAACTCAGAACCAGTCCTAACTCTAGTCCTAA
AGTCCATTTCTAACAGTCAATAGGCAATAAGTTTTCTTTGTTGTGTTGGA
AGTTCATTCTAAAGTACCCGACCCGTGTGCGTCAGACTTCTCTAGAAACG
CTTATGCATTAGTTACATTAAAACATAGAAATCTAAAAGTTACTTTAAAA
CATAGAAATGCAGAAGAACTAACAACGGTCCAGTCACCTTTTTTTTTAAA
TCTGTTGAAGTGCAATGTATTGATGGACAGCCGCGATCGCCCTTTGTAGA
CGGACGGGAGATGGGTCTTTCAAAATAAGATTCCAAAAGAATTGAATCAT
CACTCGCAGTGTAGAGTTTCTATTTTTTGTATTTCTCTCTGAAAAAGTCT
TTATCTCTCCTATCTGTTGTTTCAGTACATATCGCAATCTGCCTGCATCA
GTTAAAAAAGATCATGATCACCTGGTAGCCTAAATAATGCCTGGATGTAC
ATCTTCACAAAACATAAACGTATTCCACACAAAGATTGAATTTACCAACA
GCGTCCAATAATTGGTAAGTCTGAGAGGAACGTATTGGAATGGTCACTAA
TTAGATTTTGCAACAGTGCTCATGATCAAGTTTGTGTGTTTTCTTTTCTT
TTACATCATACTTTTCGTTCCCGCAAAACTGGTTGGGAATTGTGACCTAG
GCATTACGTAGGATACATTGCAATTGCAATTTGGTTGATTCGCTATATCT
TGTTCTCAAACGATTTCATGTACTTCATAGCTTTCACTTCAGGTTCAAAC
TTTCAAACATGTCTGTCCCACGTCTGTTGTAGCAGAAAACATGTTGGCAG
AAACGACTACATCCCTAGACACGTACCTCAACCCCAACTCGACCCCAGAA
GAGACGGCAAAATGTTACGACAACTGGTCCGGGAACTATGAAAAGGTGTG
TACCTGAATGATGTGCTAGCTATAGAAACAAGCAAAAATGATAAAAAAAG
CAAACAAATATACCGGAGATCTTATTACTGTAAAAGGCAAAATGTTCACG
GGGATTAATTTCACGGTAGGGAGAAAATGGAGTGTTCGCTGTGGTTTTAG
GTTTGCGGTTGAAAGTACCATGAAGGGTTTTAATTACTGTGAAAGGAGAA
TGTTCGTGGTGGTTTAAAGTTCTCGGTGAAGAGTATTCTCCAAGCAGAGG
TTCGGCTCCGTCTATTTTTTATGTGTTTAGGCATTTTCTACGTACCAGCA
AAGAAAATTCTGGATTTCAGAAGTGACAATAAGCTGATAGCTTATTGAGA
TATGCATTTTTATACAGTTTCAGTCTCCTACAATGGTTTTAAGTGGTTCA
GGAAATGGTTCTAAATGAACCTTNATGGACCTTGTAGGACTATGTGCTTC
TGATGGACATTCAATGGGGTGGTCAACTTGAAATAAACTCAGTGGTTCAT
AACAATCAATTGAGCTATTTTAGTCTCAAGATCATAATGTTCCTTTGCCA
AATATCAACTCATTCGGTGGAAAAATTAACCTGTTTTAGAACCACTTGTA
TTGCTGTTTGGTTCACCCTTGTTACTGATGAATGACGTCAGCTGTTCAGT
CAGGACTGATAGACATGATCCACCAACATATTAACACAGGGTAGACCCCG
ATTTTTCTCGAAAATTGATTTGGGATCTTTAACGTAGTTAGCTGACGCGC
GACTCTTCTCAAAAACGGGATCTCTGCTTTGGACTTCCCATTGGCATTGG
AAAAACTATAATTTACCTCAAGCGAACGAATAAGTACAGTAGATCTAACT
CGTGCCAGTCAAACTCAAGTTATGTCAAAACGTTTCATATAAATAGTTGA
TACAATACGTTTAGTTGAGTGCACCACCAATACATATGTTAAAAAAACGG
AACGCCAAGTCGAGCTCCGTCCGCGGCGGGCCCCGTCCTTGGTGCTGAAA
TGGGGGTCCCTCGCTCCTACGTCCTCCTCCGCCGAGTGAGTCAGTCAGTC
CGTCCGATGAACGAGCGACGGAGGAGGCGTCCCGAGGTGGTCGGGCAAGT
TCGGCTCAGCCCCGTGCCTGGTGGGCAGGAGTAAACCCAAGGGTGGTAGG
CAGAGGACGCTCCGGTCTGGCATGTCATTGTGACGTCACGGCTCCCAGAA
TCATGCTTTAGATATCTATCCTAAAGCAGATGGCGGTGAAGTTCGTTAAG
TTTAGCCGCCCCAAAATCGGAGAATCCTAGCTATAAGAAAAGCGGTGTAG
TCACCAGTAAACCTTGCGATCTTAATCTTCGAAACCGACATCTGCTTGGA
GATTGATTTATGCCGTCTCTCTCAACAGGAGTTAATGACGCAGCTGAAGT
GTACTGCTCCCAGAGTGTGCGCCGACGCTATGGAGAAAACTATGGGCGGC
TCAAACCGCAAGGAGGTCCGTATTCTTGACGTGGCGGCCGGGACTGGACT
GTGCGCGGAAGAGGTTAGGTGGTTCAAGTGATAATCTGGTTTACGGTTAG
CCCCAGCTGGGCATGATCGTCTGAGCCCCTTCCTCAGAAACACTTCTTGT
CTAGACCATGCTTGATATATGATGTTCAGACGGCTTTTTTCATGTCTCAG
CGGATGTCAAAGTAAAGTGCTTTTCAACGCGCGCTACCACAGTCAATTTT
TTCATCAGGGCATGATGAGGTACATGTATGCTACTCCTTGCCACATGGTG
GCGTTACAACGGTAAGAAGGATGATGTCTTGAAAGTTGTCACCCTCATTA
AAACAGGACCCCCATCGCTCCACGTTACATCGCTCGCGAAAGGGGCCCTG
ATAACCACCGCCACCAGACATGGTTCTGGCGACGTCGCCGACACTTGCTC
ATGAATAATTAATGAGCTGGCCTTATTTGGCAATGAGCGGACTGACGAAC
TCATCTCCAGACGGAAGTCGCGGACAAGGTCGGTGGGCTTGCTCGGCTTT
CGCTGCCGCTGGGAAGCCCATATAACAGAGGCTCTTCCCTCCGCCTGTCC
TTACACTTAGAAATATGTCCCTGTCATCAAGCAGTGTCTGTAGGGTGGAC
TGCTGATGCTGACGAAGCCGCTCTAATCCAAACAAGTCTTCCACAGCTGA
AGCAAAACTATCGGCTGCCATTTGTTTTGGGTAACCAAAGCAACGATGTT
ATAATCACCCGTAACCTGATTGGTTGATAGCTTCCCAGCGTTCTTTGCGC
GTTTGCTACCGATGAGGGGAAGCAGGTGACGTCGCCAGAACCGTGTCTGG
CGGCGGTGTTTATCAGGGCCCCTTTCGCGAGCGATGTAACGTGGAGCAAT
AGGGGTCCTGATTTATTGAGGGTGTACCGCTGTACACTCCGATGAAAGCA
GCCAAGACGTCCGTGAAGGCGTTGGCTGCGGCTGTGTAGAAAGAACTAAG
CTTATCAATAACTTACCAAGCTACTCACATCGATATTATTTCACCATGCG
GCAAGAGGACAATTCAGGCTCTGTAGCTGTGTAATGCTTAGGTCCCAATT
GAAACAAGAGTCCGTAGGACACAATCTTCCGTGAAGTAATAATGGTATGT
GCGGTGTAGCTTACCCTAGCCGGCTGATAGTTACAGGGTTGGCTGATAGT
TACGGGTTGGCTGCAAAAAGTGCATTATTTAGCCCCCAAAAAAGCCGGTT
CAGAGCCTGCAACGGAGGCTATCTCTTGCAGTCATTCTATTAATTCGATC
GATTGATTTATTATTCCTTAGCTGGTGAAGAAGGGATTTACCAACATAGA
CGCGGTAGACGGGAGTCAGGGAATGCTGGACCTTGCCGAGAAGAAGCAGA
TCTACCGCCGACTCATCTGTGACTTTGTTGGACCGAACCCCCTGGACATC
GAAAACAGTAATTGTCGTATTTCACAATGTCTAACAACCAACAAAACGAA
TCAAATCCGAAATCTTGAAAACTGGCAAAAGGAACACTTGATAAGCTTTC
CTTTTTTTAACTAAGAAAAACTGGACAGGTCTTAGTACGTACCTACAAAC
GGCATATACACGGAGAGATCATATGAATCTCTCACAGATTCCAAACTTCT
GGAATACATAGGTTTAGATCAAACCGTATATTCTAACTGAAAAACAACTG
TTCCCTTCATAGACACATATGACGCCATTGCCTGCTGTTCTGCGTTCGCC
GCGGGTCACCTGAAGGAAGACTGACAACCTGAGCTCATACGGGTCGTCAA
ACCAGGTGAGCTGCAGGTCTAGATTTCAGATAAGCCTCATCTAATGTCAA
ACCGGTGCAATGATCAAGGGNTATGAATCTCTCACAGATTCCAAACTTCT
GGAATACATAGGTTTAGATTAAACCGTATATTCTAACTGAAAAACAACTG
TTCCCTTCATAGACACATATGACGCCATTGCCTGCTGTTCTGCGTTCGCC
GCGGGTCACCTGAAGGAAGACTGTTTACCTGAGCTCATACGGGTCGTCAA
ACCAGGTGAGCTGCAGGTCTAGATTTCAGATAAGCCTCATCTAATGTCAA
ACCGGTGCAATGATTTAGCGCTAGAGTATTTGCCCTACATTGGTTCGTTC
TGATTGCGGCTGCATGGTGTTCTGACCACTGCAGCAGCAGAACACAGTGG
GCTACTACTACTACTATTGGTTCAAAACCTCTGCCGGGTATCATACACAT
AGAATATGGCACCGTTTCGTCTGCTTAAGCCGGCGTCACAATTCATGCGA
GCGTCGGCCGAACTTGTAGTTCGCCCGTAGCTCGCCGAATGTCAAAATCG
CCCGAGCGTCGACCGTATTTGCCAATGAAAATCTCGGGTGACTTCCGTCA
AACACTAAAAATCCCCCATGAGATGGTACCATCTCTTGGACATGGACAAA
GTCAGAATCGACTAACCTGGTAAAAGGCCAATATTTGGATCAACTTTGAT
TTCTGAAAATCGCCCGAAGTCCGCATAATCGACAGAACGTCGGCCGTACT
TCGGCCGAAAATGCACATTTGAAGCTCACCAACACGTCGACCGAGCTGAA
TTTCTTATTTGTGACGGGGGCTTTAGCACTTGGGAGAATGAGTATGGGAG
TTCAATTCTCTACGCTGCAAGTGGACTAACAATGATTATAGAAACGTAGG
GGGTGGTGTATTTCGTTGTTACCTCCATGAAGAATGGAGGTATTGTTTCG
GGCGCTTCTGCGTGCTTGTGTTTGTAACATGTAAAATGAATAGCCCCAAA
CCCCCGTAATGCGAAGTGACAAACACCCTAATCGTCCATTTCCTCATTTC
CAGGCGGCTACATCGTCATCACGTTCCGCGAGGAGTGGTTGCACCATTAC
GAGGATTACAAGGATAAGCTGGAGCCCGCCATGGCCCGCCTGCAGGACAA
GGGGCTCTGGGAGCGAGTCAGCCGGGAGGTACCGGTCTTTCCCAACTTCT
ACCCAGGCAAGAACGGGATAACCATCGTCTACAAGGTCCTGTAG Coding sequence (CDS) from alignment at Sc0000078:458885..466078+ >Blg00410.3 ID=Blg00410.3|Name=Blg00410.3|organism=Branchiostoma lanceolatum|type=CDS|length=660bp|location=Sequence derived from alignment at Sc0000078:458885..466078+ (Branchiostoma lanceolatum)
ATGTTGGCAGAAACGACTACATCCCTAGACACGTACCTCAACCCCAACTC
GACCCCAGAAGAGACGGCAAAATGTTACGACAACTGGTCCGGGAACTATG
AAAAGGAGTTAATGACGCAGCTGAAGTGTACTGCTCCCAGAGTGTGCGCC
GACGCTATGGAGAAAACTATGGGCGGCTCAAACCGCAAGGAGGTCCGTAT
TCTTGACGTGGCGGCCGGGACTGGACTGTGCGCGGAAGAGCTGGTGAAGA
AGGGATTTACCAACATAGACGCGGTAGACGGGAGTCAGGGAATGCTGGAC
CTTGCCGAGAAGAAGCAGATCTACCGCCGACTCATCTGTGACTTTGTTGG
ACCGAACCCCCTGGACATCGAAAACAACACATATGACGCCATTGCCTGCT
GTTCTGCGTTCGCCGCGGGTCACCTGAAGGAAGACTGTTTACCTGAGCTC
ATACGGGTCGTCAAACCAGGCGGCTACATCGTCATCACGTTCCGCGAGGA
GTGGTTGCACCATTACGAGGATTACAAGGATAAGCTGGAGCCCGCCATGG
CCCGCCTGCAGGACAAGGGGCTCTGGGAGCGAGTCAGCCGGGAGGTACCG
GTCTTTCCCAACTTCTACCCAGGCAAGAACGGGATAACCATCGTCTACAA
GGTCCTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00410.3-exon-Sc0000078-1570713199:458885..458974 | Blg00410.3-exon-Sc0000078-1570713199:458885..458974 | Branchiostoma lanceolatum | exon |
| Blg00410.3-exon-Sc0000078-1570713199:461467..461579 | Blg00410.3-exon-Sc0000078-1570713199:461467..461579 | Branchiostoma lanceolatum | exon |
| Blg00410.3-exon-Sc0000078-1570713199:462963..463097 | Blg00410.3-exon-Sc0000078-1570713199:462963..463097 | Branchiostoma lanceolatum | exon |
| Blg00410.3-exon-Sc0000078-1570713199:464356..464491 | Blg00410.3-exon-Sc0000078-1570713199:464356..464491 | Branchiostoma lanceolatum | exon |
| Blg00410.3-exon-Sc0000078-1570713199:464997..465089 | Blg00410.3-exon-Sc0000078-1570713199:464997..465089 | Branchiostoma lanceolatum | exon |
| Blg00410.3-exon-Sc0000078-1570713199:465888..466078 | Blg00410.3-exon-Sc0000078-1570713199:465888..466078 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000078 | genome | Sc0000078:458885..466078 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00410 |
|
