Blg00402.0 (mRNA) - B. lanceolatum

Overview
NameBlg00402.0
Unique NameBlg00402.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:230892..233423+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00402.0 ID=Blg00402.0|Name=Blg00402.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2532bp|location=Sequence derived from alignment at Sc0000078:230892..233423+ (Branchiostoma lanceolatum)
ATGGCGACTGCGGCACCCCCCACCCCCCAGAGGGACACCAGGATCCATGA ACTTCTCCAGCTGCCAGAGTCGTCTCCTTTCTCGGAAGTACATGCAGCAT ACGCCGCTTTCATCCAGGACTACGTGAGAGAACGTCAGGTTGCAACTAAA CTACGGCCAGCTGAGAGGAAAAGACACAAGTTCGTGAAGAGCGGGGAACT ACTCAAAGAGGTGAGCGTAGCGTTTCTTTCACACCTTGAATCTCACCGAG ACAAGACCGCCGCCACCGACCCACTTCACGGCTTGGAAAACTACTCCGTT AAACACAACTCATCGAGTCTTACAGTCCACATCCCTGAAGATTCTATAGC TTCTTGGAAGACAGTATGTAAGGCGTTCTATGCGGTCGACGGAATAGACA GAGATTTCAATGGTGTACAATTCAGTACGACGTTTACGGACAATGAGACG CACCTTGTCGCTGAACTTGGATCACTGCATATTACAGTATACGACACGAG CAAGCTACTGATTCAGGGCACTAGCTACATATTATGGCTGGTATCACACT ACAATATCCTGCAAGGTATGGTGCAATCCGACATCACTGATCAGTGCAAA GGTAACCGACCTATCGCCCCTGAAGTCTACAAACAGGCAGACCGCACTCC ACAGAACACACATGAACTTGATGAAGAAGAAACCATTGTCTGTGTGGTGT GCAACAAACAGGAAGCGGAGGGTGACGAGTTTGTGGAGTGCAGTGGCTGT GTAAGTTGGACTCATTTCGAATGTACTGGTTTGGATGAGGCCACACAGTC GTTTCTACGGGACACAGACGAAGAATACCATTGTATTCTTTGCCACATCC CTCGGAATGCCCCCAAGCCTGTGAATCAGACAGTATCTTTTAGCACCCTC CCCGCCACAATGAAAGATGCAAATCATGGCAACGTGAGAGCTAGCAGTAG TTCTCATGTTAATGATGTCAACCCCGGAGCGAAAGTCATGAACAATGACT CCACTGTAATTGAGAATAGCTTGCCTTTGCCCGTCAACAATCTGGAAGCA CTACAAAGGGCGCTAATTGAAATGGAATCAAGCCTGGCCTCCTCAAAACT ACAGGCGAACACATTCGAAACAAAGGTCTCTGGCCAACTAGATTTTATCA TGAAGAAGTTAGAGTCAGTCGGATGTATTTCCAAGAACGATGACACTGAA CTACGAAAGCTACGCGAAGACAACGGAAGACTACGTCGAAGAGTGCAACA ACTAGAAGAGACCGTCTCTACTCTACAGACTACTTCTAAGGCCGCGCAGA AGGAAATGAGTGACATCAAACTGTCACATGATGTCATGAAGGTGAAAGTA TCGAACATGAAAGGACAGCTAGCAAACCGCGCACAGCCCCAATCCGATGT TCAGTCTCATAAGGAGACTGCTAACACCCAACCCGCGGATCTTGTGCCGA AGTACTCTTTACCCACCACAAACCGATTTGAGGTCCTAAGCCAACACGAG AGTGACAAACAAATCCGAGGTGAAGAAAAAGCCCCTTCGACAAAACAGAC CACCAATCCCTCAAGTAGAATAAATGCCGCTGGAGTCCCCCCTCAGGATG TTCCCGTACAAAAACGAGTAGTTCTGATAGGGGATTCAAATGCGCAGAAA CTGAAGCCAAACTTGCTGTGCCCTTCGGCAGAAATGCCAACACCTCTCTG GTCCCCAAACCTCTACACAACACCATCAGTACTAGAGAAGATATCAGAAG AAGACGTCAACCNCGTCACCCCCAACACAATAGTTTTACATGTCGGCACG AACGACGTAATGGCTAAGTCCAAGGAGACGGTTATCTCAGAGTTTGAGAT GGCCGTCAGCACAGCTCAGTCGCTATTTCCAGATGCAGAGTTAGTGATTT CTGCTGTGCCCCCAAGGAGAAACTCCAGCTTCAGGCCGAACGTCAACAGT GACATAACAGCAATCAACCAACATCTACAGAACTTAAGTGAGACAAACGT CCAGCTGACCTATGTCAGCCATCCACAACTCTGGAGCAGCAATGACTACA GCTCAAGTGTGTTCGAGCATGATGGCTATCATTTAAACGGAGATGGTGTA AGAGTCATAGCTTTTAATCTCAAGAGACAGGCATCAGGTGCTTTAGGTCT CCCGCCACGCCGCTCAAGCTACAAAAGCAAGGCCAATCCCGGTAACGCTA CCTCTCCTCAGAGGAACAAAGGGAGGCGTGGAAGTTACAGCCGATCCGAC CGGTCCGACCGGCCCCTCTCCCGGAGCAACGACGGTCTGTCAAAGCCTCC TTCCCCCCGTAACGTGAACATGAAGAACAGTGGCAAACCCTATAGTCAGT ACAATGCAGGACCGAATTCGAACGCGACGCGAAGACCGCAACATGAAGTC TTCCATAAGGNTATAGTCAGTACAATGCAGGACCGAATTCGAACGCGACG CCAAGACCGCAACAGGAAGTCTTCCATAAGGGATCTTCCAACGCTGCTAA CGGTCGGGGGAACGGCATCGCTCCACCCATGA

Coding sequence (CDS) from alignment at Sc0000078:230892..233423+

>Blg00402.0 ID=Blg00402.0|Name=Blg00402.0|organism=Branchiostoma lanceolatum|type=CDS|length=2532bp|location=Sequence derived from alignment at Sc0000078:230892..233423+ (Branchiostoma lanceolatum)
ATGGCGACTGCGGCACCCCCCACCCCCCAGAGGGACACCAGGATCCATGA
ACTTCTCCAGCTGCCAGAGTCGTCTCCTTTCTCGGAAGTACATGCAGCAT
ACGCCGCTTTCATCCAGGACTACGTGAGAGAACGTCAGGTTGCAACTAAA
CTACGGCCAGCTGAGAGGAAAAGACACAAGTTCGTGAAGAGCGGGGAACT
ACTCAAAGAGGTGAGCGTAGCGTTTCTTTCACACCTTGAATCTCACCGAG
ACAAGACCGCCGCCACCGACCCACTTCACGGCTTGGAAAACTACTCCGTT
AAACACAACTCATCGAGTCTTACAGTCCACATCCCTGAAGATTCTATAGC
TTCTTGGAAGACAGTATGTAAGGCGTTCTATGCGGTCGACGGAATAGACA
GAGATTTCAATGGTGTACAATTCAGTACGACGTTTACGGACAATGAGACG
CACCTTGTCGCTGAACTTGGATCACTGCATATTACAGTATACGACACGAG
CAAGCTACTGATTCAGGGCACTAGCTACATATTATGGCTGGTATCACACT
ACAATATCCTGCAAGGTATGGTGCAATCCGACATCACTGATCAGTGCAAA
GGTAACCGACCTATCGCCCCTGAAGTCTACAAACAGGCAGACCGCACTCC
ACAGAACACACATGAACTTGATGAAGAAGAAACCATTGTCTGTGTGGTGT
GCAACAAACAGGAAGCGGAGGGTGACGAGTTTGTGGAGTGCAGTGGCTGT
GTAAGTTGGACTCATTTCGAATGTACTGGTTTGGATGAGGCCACACAGTC
GTTTCTACGGGACACAGACGAAGAATACCATTGTATTCTTTGCCACATCC
CTCGGAATGCCCCCAAGCCTGTGAATCAGACAGTATCTTTTAGCACCCTC
CCCGCCACAATGAAAGATGCAAATCATGGCAACGTGAGAGCTAGCAGTAG
TTCTCATGTTAATGATGTCAACCCCGGAGCGAAAGTCATGAACAATGACT
CCACTGTAATTGAGAATAGCTTGCCTTTGCCCGTCAACAATCTGGAAGCA
CTACAAAGGGCGCTAATTGAAATGGAATCAAGCCTGGCCTCCTCAAAACT
ACAGGCGAACACATTCGAAACAAAGGTCTCTGGCCAACTAGATTTTATCA
TGAAGAAGTTAGAGTCAGTCGGATGTATTTCCAAGAACGATGACACTGAA
CTACGAAAGCTACGCGAAGACAACGGAAGACTACGTCGAAGAGTGCAACA
ACTAGAAGAGACCGTCTCTACTCTACAGACTACTTCTAAGGCCGCGCAGA
AGGAAATGAGTGACATCAAACTGTCACATGATGTCATGAAGGTGAAAGTA
TCGAACATGAAAGGACAGCTAGCAAACCGCGCACAGCCCCAATCCGATGT
TCAGTCTCATAAGGAGACTGCTAACACCCAACCCGCGGATCTTGTGCCGA
AGTACTCTTTACCCACCACAAACCGATTTGAGGTCCTAAGCCAACACGAG
AGTGACAAACAAATCCGAGGTGAAGAAAAAGCCCCTTCGACAAAACAGAC
CACCAATCCCTCAAGTAGAATAAATGCCGCTGGAGTCCCCCCTCAGGATG
TTCCCGTACAAAAACGAGTAGTTCTGATAGGGGATTCAAATGCGCAGAAA
CTGAAGCCAAACTTGCTGTGCCCTTCGGCAGAAATGCCAACACCTCTCTG
GTCCCCAAACCTCTACACAACACCATCAGTACTAGAGAAGATATCAGAAG
AAGACGTCAACCNCGTCACCCCCAACACAATAGTTTTACATGTCGGCACG
AACGACGTAATGGCTAAGTCCAAGGAGACGGTTATCTCAGAGTTTGAGAT
GGCCGTCAGCACAGCTCAGTCGCTATTTCCAGATGCAGAGTTAGTGATTT
CTGCTGTGCCCCCAAGGAGAAACTCCAGCTTCAGGCCGAACGTCAACAGT
GACATAACAGCAATCAACCAACATCTACAGAACTTAAGTGAGACAAACGT
CCAGCTGACCTATGTCAGCCATCCACAACTCTGGAGCAGCAATGACTACA
GCTCAAGTGTGTTCGAGCATGATGGCTATCATTTAAACGGAGATGGTGTA
AGAGTCATAGCTTTTAATCTCAAGAGACAGGCATCAGGTGCTTTAGGTCT
CCCGCCACGCCGCTCAAGCTACAAAAGCAAGGCCAATCCCGGTAACGCTA
CCTCTCCTCAGAGGAACAAAGGGAGGCGTGGAAGTTACAGCCGATCCGAC
CGGTCCGACCGGCCCCTCTCCCGGAGCAACGACGGTCTGTCAAAGCCTCC
TTCCCCCCGTAACGTGAACATGAAGAACAGTGGCAAACCCTATAGTCAGT
ACAATGCAGGACCGAATTCGAACGCGACGCGAAGACCGCAACATGAAGTC
TTCCATAAGGNTATAGTCAGTACAATGCAGGACCGAATTCGAACGCGACG
CCAAGACCGCAACAGGAAGTCTTCCATAAGGGATCTTCCAACGCTGCTAA
CGGTCGGGGGAACGGCATCGCTCCACCCATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00402.0-exon-Sc0000078-1570713199:230892..233423Blg00402.0-exon-Sc0000078-1570713199:230892..233423Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00402.0Blg00402.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:230892..233423 +
Properties
Property NameValue
GeneIDBlg00402