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Sequence
The following sequences are available for this feature:
mRNA from alignment at xfSc0000711:1..4438- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00386.0 ID=Blg00386.0|Name=Blg00386.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4438bp|location=Sequence derived from alignment at xfSc0000711:1..4438- (Branchiostoma lanceolatum)
TTAGTCTTTTGCCTTTTTCTTTTACCCATTGCCAGCTTCACCTGCCTGCT
GACATGTAGCATAACTATACCCTCAGAACCCACAGGACTCTGTGTTCAAG
AGGAGCTTGCGAGGAGTTGGTGGCATAGTCAATCAGGAGGAAAAACAGTT
GATGAAGCAGGTTAGATGCTAGCTTGGTTAGCGCTGCCCACGTTGCTTCC
AGTCTATCTCATATAGCCATGCTTTTCCCATCAAGCTAAGATTCAACAGA
TGAAAGACTTGCAGAAAATGCGTCTTTAAGATTATTCAATCAGCCATTTA
CCAGGATTTTCTGTTTTCTGACTTGATCATATAACAGAAGAAATCGGTTT
ATGTTATGAAATGTATTGATTTCACATGATTTGCTACAGTGTTTAAAAAA
ACATTGTCTGCAAATTTGGCATTTCAATTTTGCTTTGAAAGGTTGTCGTA
AAACTAAAAGTTATCACTACAATTTAGTAAAAACCAATCAAACAACGTTG
CTTGCACCAAAGGGAAACATAGCTTCTTGCAGATTGAGATACAGCAGGTT
ATATTTGGCAAGCTTACTAGATGGGGGACTAGCCTGCAGGTAATGTAGTA
GACTGGACGCAGCCTGGGCTGGTAGATGTAGTGTCGGTGTGAACTGACTC
AGTGCTTCTTGCATGGGACTGGACTGACTGCCGCCCTCCCACCAGCCGGA
GGTACACCTGTCTCACCTTAACACTAACCCTGGGAGCAAGGTATATGTAC
TCCTGTAGGACTGTCCAACCTGCCACTTCAAGCTCTCACAGCCATGTACA
CAGTTTGTGTGTCGGGCTGTTGCTATACGACACTGCCACAAGCAATATAA
ATCCATGCTCAAATCACAGATTTCTGCACTATCATTGGAGCTGAACAACA
GTTGGACAGTTCTGCAGCATATTGCACCTGCACTCATGAAAATGCATTCA
TCAGCCATCTTACCACTATATTAAACCTGGACACCCCTGTTTTCAGTGGT
ATTTGCCATATCTCGTCTAATCTCTTGTCAGTTTTTGGCTGTTCCACTGC
TGAGCAGGGGTGCTTGCAGTAAGTAGAGTGAACTCTTTCCCCCACCATCT
CTAGGAAGCCCCCTGTCAATCACACTCTTGAACCGAGGAAACAGCCGCCA
CATATCTCACATCAGATAACAAACACAACACAGAAGCCCACCCATTCCAT
GTAGACCTTCCCAATGCATGCAAGCTTTTTTTTTGTTGCTTTTCCCATTT
CTTTCTTTCCAGTTTATTTGCACCCAGAGTATTGTCATGTGGCCTTGTAT
GTCACTGTCTATGCTAAAATCAGTCCTTTAAAGGAAATAGCCGTTTGTAA
ATTTTCAGTCTTTGCCAGGATGTCTCAGTCTCCTAATTGCATATAAAAGA
AGGTTTTATAGCCCGACCACCACAGAAGATGAGATAGAAATGTGGTTGTT
TGTATGCACAGGTGATATGTGTAACTTATGTAATAAAAAATATACAATAT
TGTTGGTGAGTTGAAGCCGTGTGCAAATTCATGTTAAGCTGTGTCTAAGA
CAAAAGACTTTGTGTTATATGATAGTCTCAAGAACTATAGTCTGTAGCAG
GGTAAGAAGACACAAGTATATATGATTTCTGTATGTTCGATATTTACTTG
AGGTGGTATTCAAGATGGAAAAGAGTCTACTAGGATTATTGATGATTGTC
ATAGAAAATCATGTGGTAGCATACCGTAGCTCTGTTCTGTAACCCTGTCT
GTTCCTGATGTCCTATCCAGTTATTACGTAAAAACTGGACTATCTGGTAA
ATACTGAAGGCTACGGGTTGGTACCAGTGGGCAGAAACAGGAAAAATGAC
TCCGGGAGTCAGAATCGAAGTTTTCTACATCCCCAAGTAGTCGGATTGGT
ACATGTGGAACTTTTGACACAGTTTCTAGGAAACATGGGGTTCAAAAGGA
GGAATTGTCTGGTCGGACAACAACTATATATAGTAAGTTTTGCTATTTTA
GCTCTGTTCCCAAGAATCTCTCAGTTGAATGGTTGGTGATTGTGTGATAA
GGAGACCTGGCTTTGTCTTTGGAAAGGAAGTTCTTTTCCTTGTAAGCCCC
CGTGTGTTGTTCTGGTACTGCATGATAGTGAGAGCGGGTGTGTGTTGTTG
TAGTTCCAGACACAGGAGACTAAGCGTATGAAGGCTGAGCAGCAGAGGCA
GGAGCAGAAGCAGACCAAGCAGCTCGAGGAACTGCGCTCCAGACACGACG
TCACTATGCAGGAACTGCAGCAGATGCAGGTAAGGGATGTCTGCTCAGGC
CAAAATATATGGCATTTGTAGTTAACATTGTACAAGGTTCAGGATATAAA
CTCAAGTATCTGTGGTGGAGTATGTAAATGGAACTCTACTTCACAAATTT
ATAACTGAACTAATGTCAGTTTAGAGTGGATGCAAAGGAAGAACTAAAAA
AATGTACCTGGTATAGCATGCTACTGTTCAAGAACACCTACACAGAAAGA
GCAGATAATGGCTATTATTTTTTTGCAGCAGTGTATGTTAGTTACATCCA
AACCAATGTCATAGCACTAAACCAATGTACATAGCACTATCCATCATCAT
AACAGGGCATGTGATGGACAACTGTCAGTAGTGTACCCTCACTTATTTTA
CCTGCACCCTCATTTTCCGCCTAGAACGAGAAGCGACACATGCTGATAGA
GCACGAGACCCAGAAGTTGAAGGAAATTGACGAGCAGCACCAGCGAGAGT
TACGTGAGTGGAGAGAGAAGCTGAGGCCACGCAAGAAGGTACATGTATGT
GTGTGGGGTGTGGCAGGTCTAGTTGGAATGCCAGGGCAAATGGATAATCG
TAATTTCTCAATAATGAGGCTCCAACATATGTGGTATTTCAAAGACTTTC
CTAGCTTTAAGGAGTCTAAAGTAAGATATAGCTCACTAAAGCTATATGTA
AACTTATCGATTCCACAGAAACTGGAGGACGAGTTTCAGCATCAGTTGCA
GGAGCAGGAACAGTTCTACTCCATGGGCCACATGAACAACGAGCCGGTCC
CATATGCCGTGATGTCCACCCCCACACCATCGTACTGAAGTCCTGTTCTG
TCTTGTTGAAAGGCCATGCCAAACTTTGGTTTTGCTGACACTGTATGGAG
TCATGTAACCATAAGAATGCTATTCCAACTTGCACAGTTACATGTAAATG
CATGATTAAGGCACATCTGAAGTTATAACCTTCTTCCTATGCAAGGGGCC
AGACAATGCGCTTGGTCACACACATTGTTTTAGATAAACACACTCCCCAC
AAGATGTTGTGAAACTGATGTGAACTTTAGGATGGCCTCTTTCTTCACAT
GCCTGTAGACGGAAAAACCTTCAGATGTGCCTAGAAAATCACAACATTTC
TTGATTAGCAGTCACAATCATTGTACATGTTCCAAAAACGTCTGCCAATA
CCTCTTGTCAATTGTCTTGTACATTTAGTTCCAGGAGTTCTGATTCACTA
AGAAATGTATCACAGCTGCTTATACCTGGTGTTTATATTGATGTATAATC
AACAGTTCACTTCTTAAAAGAAATGCTTCATCGCCTTTTAATCTTAAGTA
GATAATGAAAGATGATATCCTAGCTAGAAATATTTACTGGCAAGAAGGCT
TTCCCAAAATACTTCACAAAGAAGGTTTGGCTCAGTTCAAACAGCAAGTC
CAATAGAATGTGACATGTATGAAAGAGGCTGCAGCAGACTAGGCAACTAT
TTTGGATCACAAATCTTGGTCATTACAATAAGCATAGGGATGAATCTGGA
AGGTACATTTATATTCACTCTTGTAAGAGTCTGTATCAGTGCATAACATC
TTACTATCATATACTTTTACAATGGTGACGATTATTTATTTGATTGTTTG
TATTTACTGTATGTTGTACAGTGGAAAACCTGTCTCTCCAGATGATACCT
TAACAGCACCAATGGAATGAAATACTCATGTATTAACCACATACAGTGAC
TACAATGATTAATCTTCCCTTAGTTTTTAGAATAGTAGTTAAGTCAATCA
ACAACAGTTAGTTAACTTAATGGATTGGGCAGCAAGTATATATTCTTTCA
ATGTGTAAGAATTGGTTGTATACATACTATAATAGAAAAAGTATGACTTT
TCAAAATGCCTGAATAGATGATGCTGGATATACATGTACAATGTGCATCT
TGGTGCATTTTATGTAATGACTATTACAATATTAATATACCTAGTTATTT
TTCTGTGCGGTTCGTCCATTTTTTTCACTCATTTTCTCTTATTTACTTTT
TTTTTCCCTCTGAATATGCAAATAAGTAAATGCAAAGGTTAAGAAATAGG
ATATTTTATCATACTGTGTGATGAGATGAATTTTATCATTTGTATCATAC
ATGATACATCTACTGTGCTGCAATGCACACATTTAGCA Coding sequence (CDS) from alignment at xfSc0000711:1..4438- >Blg00386.0 ID=Blg00386.0|Name=Blg00386.0|organism=Branchiostoma lanceolatum|type=CDS|length=369bp|location=Sequence derived from alignment at xfSc0000711:1..4438- (Branchiostoma lanceolatum)
ATGAAGCAGTTCCAGACACAGGAGACTAAGCGTATGAAGGCTGAGCAGCA
GAGGCAGGAGCAGAAGCAGACCAAGCAGCTCGAGGAACTGCGCTCCAGAC
ACGACGTCACTATGCAGGAACTGCAGCAGATGCAGAACGAGAAGCGACAC
ATGCTGATAGAGCACGAGACCCAGAAGTTGAAGGAAATTGACGAGCAGCA
CCAGCGAGAGTTACGTGAGTGGAGAGAGAAGCTGAGGCCACGCAAGAAGA
AACTGGAGGACGAGTTTCAGCATCAGTTGCAGGAGCAGGAACAGTTCTAC
TCCATGGGCCACATGAACAACGAGCCGGTCCCATATGCCGTGATGTCCAC
CCCCACACCATCGTACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00386.0-exon-xfSc0000711-1570713199:4279..4438 | Blg00386.0-exon-xfSc0000711-1570713199:4279..4438 | Branchiostoma lanceolatum | exon |
| Blg00386.0-exon-xfSc0000711-1570713199:2160..2285 | Blg00386.0-exon-xfSc0000711-1570713199:2160..2285 | Branchiostoma lanceolatum | exon |
| Blg00386.0-exon-xfSc0000711-1570713199:1651..1764 | Blg00386.0-exon-xfSc0000711-1570713199:1651..1764 | Branchiostoma lanceolatum | exon |
| Blg00386.0-exon-xfSc0000711-1570713199:1..1470 | Blg00386.0-exon-xfSc0000711-1570713199:1..1470 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000711 | genome | xfSc0000711:1..4438 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00386 |
|
