Blg00385.0 (mRNA) - B. lanceolatum

Overview
NameBlg00385.0
Unique NameBlg00385.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000477:2557..4450+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00385.0 ID=Blg00385.0|Name=Blg00385.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1894bp|location=Sequence derived from alignment at Sc0000477:2557..4450+ (Branchiostoma lanceolatum)
ATGGCCTTTACTGGACACAAAGCTGTGTATGTCTGACCCAACACAATAGG TACCCCTTTTCTCCCTGGGTCAGTTTTTGAGCCCTTAATGAGAATTTGGA CATAGTTGGGTTGATACACATTTGGTACAAAAGTGATGTCCTGCCATTGT AAGTGGAGGTCTTGTTTGAATTGTTTCCATGAATCACAAGTGAATTCTCC CACTCTCAAAAAGCCGAAGAATGCCACCAGGAATGCTGCTTGCATCACTA GTCTATCATACGGTTGTTTTTGAAAGATGAGTTCCATTTTGCTGCACAGC CCTTGCAAAATTGGGAGTGTTACCGGTAAGCGTACTCTCACTGGCTTCTG ACCTTTAGAGTTTCTGATCCCTTGTACAATGCGGTTAATGAGTCCCCTTG CCTAAGTTGGATAGATTTTTTGAGACCAAGTACAACTCCAACCTACAAAA TTGACACACTTTCTCCCTGTTAGCCACTATCTGTCATTGTGCATTGTACA TAACTATATATATATAACTACATGTACATTCTATTCAGTATTATTACTGA CTGACAGTTTTTGAATTACCTTTGACTAAATCCTCTTCGTGGAGCATAGG GCCTCAGTGAGTTGCCTCCACCGATTCCGGTCTTCGGCGTTCCTCTTTAC CTTTTGCCATGAGGTGTTGGCACTGTCCAGGTCTTTTTTGACACTCCTTC TCCAAGAGAGCCATGGTCTTAGTACATTATATTGAACTTGTGTCTTTGTG TGTGTACAGACTACCACCTCGGCCATCCAGCTGACAGCTGCAGACCTGAG CCAGCTGCAGCAGCTGCAGCAGCAGAACCTCAACCTGCAGCAGTACGTGT TGTTCCAGCCCGGACAGGTCAGTGGGTTTTTGATCAATGATAGAGGTCTG TTCTGTAGTCATTGGTGGTGTCAAAATCTACCTAGAGGTACATGTAGTCA GTGATCAACTACTGAATGAAGCAAAATCTTACCTAGCTGTCACCCTCCCT TTGTGTTATTATTGTTGAATTTTGGATGTGAGTTCCAAACCTGTTTGACT TGTGTATGAAATGTGTATATCATTCAGGTAATTTTTTTCTAGTGACATTT TAACTTAGTGCTATGTCTAAATCTTGCTCATGTGCAATGACAACAGGAAC AGGCATTAATTCAGGGACTCTGTTTACCACATTACAGCTTGGCAATGGTC AGTTTTTCCTGGCTCAGCCCCAGATGCCAGGGATTCAACAGGTACAACAG GTGAGTCAGCCATGATGAGTTACTTATACTTAGTTATAGTNGCGGTTAAT GAGAAAAGATTCTTTAATGGGATTTTCCCAACCTTGTTCCAAATGCAAAT TACGCACTGCACTTAGATACACATTAATTGTGCCATATGAAACTGTCTGG GTCAAGGAAAGAATGAAGTACACTATTGTATGCTCAGAGGCAGGTAGAAT ATTACCACGTTCATCCCAAAGTTGATGTTTAATGCAAAATTGGAGGAACT GTGATACCCCTGATGAGTAGGTTTGTCTTGTCTTGGGTTTCAGAGCTGCC AAGAAATACTCCTGAGCTCGCCTTCTTAGGTCAGCATCAGTGATGCGGGG ATGCAACAAGAAACTGGGGCAGCTTGGGGGGCCAGTAGTCTGAATCTGTC CATCTGAAATCGGGATAGGGCATCAGCTATGCTGTTCTCTTCACTTGCTA AATGTACTGCTTTTAAGACAAAGTTCTGATCTAAAGACTGGGCTACAATT GGTCTGACTAATGCCATGATTTCGGGCACTTTAGACTTCATTGAATTGAT AATGGAGACGACTGATTCGTTGTCACACCAAATTGTCACTCTCTTGTTCT GAAAGTGGGTCCCCCACAAGGCACAGGCTACTCTAATGGGGTAA

Coding sequence (CDS) from alignment at Sc0000477:2557..4450+

>Blg00385.0 ID=Blg00385.0|Name=Blg00385.0|organism=Branchiostoma lanceolatum|type=CDS|length=234bp|location=Sequence derived from alignment at Sc0000477:2557..4450+ (Branchiostoma lanceolatum)
ATGGCCTTTACTGGACACAAAGCTACTACCACCTCGGCCATCCAGCTGAC
AGCTGCAGACCTGAGCCAGCTGCAGCAGCTGCAGCAGCAGAACCTCAACC
TGCAGCAGTACGTGTTGTTCCAGCCCGGACAGCTTGGCAATGGTCAGTTT
TTCCTGGCTCAGCCCCAGATGCCAGGGATTCAACAGGTACAACAGTGGGT
CCCCCACAAGGCACAGGCTACTCTAATGGGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00385.0Blg00385.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00385.0-exon-Sc0000477-1570713199:2557..2580Blg00385.0-exon-Sc0000477-1570713199:2557..2580Branchiostoma lanceolatumexon
Blg00385.0-exon-Sc0000477-1570713199:3316..3423Blg00385.0-exon-Sc0000477-1570713199:3316..3423Branchiostoma lanceolatumexon
Blg00385.0-exon-Sc0000477-1570713199:3744..3806Blg00385.0-exon-Sc0000477-1570713199:3744..3806Branchiostoma lanceolatumexon
Blg00385.0-exon-Sc0000477-1570713199:4412..4450Blg00385.0-exon-Sc0000477-1570713199:4412..4450Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000477genomeSc0000477:2557..4450 +
Properties
Property NameValue
GeneIDBlg00385