Blg00377.0 (mRNA) - B. lanceolatum

Overview
NameBlg00377.0
Unique NameBlg00377.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000477:5381..6965+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00377.0 ID=Blg00377.0|Name=Blg00377.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1585bp|location=Sequence derived from alignment at Sc0000477:5381..6965+ (Branchiostoma lanceolatum)
ATGCTGTTCCCTTCGGGGTAAGACAAATGATAAATGGTCCTCCAATCACT GCTATGTTTTTTAGGAACCACTCCAATAGGGTGGTATTGAAAATTTGAAA ACGGGGGATGCTCAAAAGGTCCTACCAATCTGCCTTTTTGAAGCTCTTTC CGAATGTTCTCCTCCACACTTTCAGGATTCATTTTACATGATACAAGGTT GTTAGATACACGGGGGGCTCTAGGCCCTGTGTATCCTGTTGTGAATCCAT CTTTGAAACCTTTGGTAATGTAGGAAACTAACCGTCTATTGGGGTGCATC AATAACTCTTTTACTAATACTTTGATTCTAATTGGAGTCACCAACTTAGT GTTATAATTACACATCTCGGGGTTCGTCGGTTGTACTTTGGTGGGAGGAC CTGTAACAACGATTAATTGCTGTAAGTACCAGTTTTGCCTGTCACTCTAG AAGAGACGCCCCGGCAATTGTGCCTGCCGTGGCCATTCTCATCACACTGG CTACATCTGTGTTTGAACCAGCAGGGGGCCCTACGGCATCCCCGCGGGGA ATTGTAGCCAAAACAGCATCCTGGTTCTGCCGGGCCTTGTTTTGGCCTGG ACATGCTAGAGACAGATTTTACATTTGCTGCTTTTGCTGGGCACTCTTTC GCCCAGTGGCTGGGCGACTGACAAATAGTACAGAGTGCTCTGGGTGGCAG TGTAAAACATACCACCCAGAGTTCAACATCAAGTTGATCCCACTTTCTGG TGAGGTCTTCTGCTGCCGATTTTCGGAATTTTTCATCATACTTTAGCCAA GCTGGGAGTGGGAATTTTGTTGCCGCATCCATTATCAGACATTGATAGCC TACTAATTCTCTAGCTCTGCCTGGCGTGTTCTCTAGCATAACATACATCA ATACTTGATACGCCTCTATCCACTGTTGCCAGCTGGCAATCTTAGGGGGC CTTTTCTTGCTTAGTGACATGGGGTTGCTAGGATTGGTGGGGTCGAACAC AAGCAACATTTTCCCTCCCTCTGGTTCATGTTCATCTGAACGCAACAAAG TTTCCAGGGCGATGTACTGGTTAGCCCAAATCTTCCTTTTTATGTCCCCA GAAACTGTAGGGAGAATGCTGCTTGTGCTCGAGTTACTTGCTACCCCTAC CCCAGAAAATTGATTGACTACACCTTTTGCCATCCATGCTGCTGCCTCTG CTTGACTCAGGCCTGGAGGTTGTGGCTGGCGTTGTAGAAGGCCGTTGTTC CCTTGGCGTTGTTGGCTCTCCCCCTGCTGTTGCTGCTGGTTGCCCTCCTG GTGCTGGGTATCCACCGGCTGGCGTTGTTGCTGCTGGTTGCCCTCCTGGT GCTGGGTATCCACTGGCTGGCGTTGTTGCTGCTGGTTTCCCACCTGGTGC TGGGTCTCCACTCGGAGTTGTTGCTGGCTGCCCACCTGTTGTCTCTGCTG TTCCTCTGCAGCCTTGTACTTAGCCACCTCTTCCCTGAGGCGACGGAGTT CCTCCCTTTCAGTCTCGTCCGGGGGATGATTGTTGCCTGGCGAATGGTTA TGTGCTTCCAGGCGCTGAAGGACTCTGTTCCTTAA

Coding sequence (CDS) from alignment at Sc0000477:5381..6965+

>Blg00377.0 ID=Blg00377.0|Name=Blg00377.0|organism=Branchiostoma lanceolatum|type=CDS|length=468bp|location=Sequence derived from alignment at Sc0000477:5381..6965+ (Branchiostoma lanceolatum)
ATGCTGTTCCCTTCGGGAAGAGACGCCCCGGCAATTGTGCCTGCCGTGGC
CATTCTCATCACACTGGCTACATCTGTGTTTGAACCAGCAGGGGGCCCTA
CGGCATCCCCGCGGGGAATTAAGGCCGTTGTTCCCTTGGCGTTGTTGGCT
CTCCCCCTGCTGTTGCTGCTGGTTGCCCTCCTGGTGCTGGGTATCCACCG
GCTGGCGTTGTTGCTGCTGGTTGCCCTCCTGGTGCTGGGTATCCACTGGC
TGGCGTTGTTGCTGCTGGTTTCCCACCTGGTGCTGGGTCTCCACTCGGAG
TTGTTGCTGGCTGCCCACCTGTTGTCTCTGCTGTTCCTCTGCAGCCTTGT
ACTTAGCCACCTCTTCCCTGAGGCGACGGAGTTCCTCCCTTTCAGTCTCG
TCCGGGGGATGATTGTTGCCTGGCGAATGGTTATGTGCTTCCAGGCGCTG
AAGGACTCTGTTCCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00377.0Blg00377.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00377.0-exon-Sc0000477-1570713199:5381..5397Blg00377.0-exon-Sc0000477-1570713199:5381..5397Branchiostoma lanceolatumexon
Blg00377.0-exon-Sc0000477-1570713199:5831..5933Blg00377.0-exon-Sc0000477-1570713199:5831..5933Branchiostoma lanceolatumexon
Blg00377.0-exon-Sc0000477-1570713199:6618..6965Blg00377.0-exon-Sc0000477-1570713199:6618..6965Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000477genomeSc0000477:5381..6965 +
Properties
Property NameValue
GeneIDBlg00377