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Sequence
The following sequences are available for this feature:
mRNA from alignment at xpSc0040258:1..4637- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00376.3 ID=Blg00376.3|Name=Blg00376.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4637bp|location=Sequence derived from alignment at xpSc0040258:1..4637- (Branchiostoma lanceolatum)
CAGAATGGAGATGGTGAGCCCCTGTCAAAGAAGATCAAGACAGAAGATAT
AAAAGGTAAAGCTGTCTTGCTGTGTAATGTTTTTACTTACTCAATGCTTC
TTATCTTGGCCATGCATGTCTTGCGCTCATTGCACCAAGTCTGTACCAGT
GCTAACCAAGTAGAGATACCATTGTATATGCTAGACCAGATAAGGAAGGG
AGGACATCAACCAAAAGATTTAAACCTTTTTGCCAGGATTAGGTGAACTT
TCTTCTATGTCAATATTTTGGCTTTTCCCAACCAAAATGTTCCATGCTTT
ATCTTCTCTCCTTATAAGGTGTTTTACAGGAGGAACATGAACAACTTTAA
ACCTGACGAGGGAAAGCCATTGAAACCTGAAGGATTTGTCGGGTTGTTCG
CAGGTTTGGTTGTTGACCCATTTTGGCTTGTTGGAAGTCCTTGTTCCAAC
CTCAGCAGCGGGCTCATGTTTCTTGGAATGTGTGAAATGGGATGACTGGC
TGTAGCATACCTAACTCACTTCACAAGGTAGTGTGTGGATCTCCTCTGTG
TTGGCAGTTCGTAGCAGCTTGTTTGCACTGTTTCTATTTGTGACCTCTAT
CCATGGTCTGCTGTGTCATCTTATCAATGTGGATACATCTTGCTCGGAGA
TTTTTTTTCTCTGTTTTTGAGTTTCTGTAGAGCGTACGGTCGGAGCCATG
TTGTCGTGGGGTTTTCCGACACCAAGGCTTCTCGAAGACTTGCTGAAAGG
TAACAGTAGTGAACTGTAATAGAGCATGTGTGCCTCCAAAAGTGATTACA
TCATAATGCTGTGAAGAAACTGTCATGGTGTCATGGCTATGCCAGGGGTT
TTGTGTGGTTCACTCTAGAACCCATAGGGTAGAGCCCTTATTGTGTTAGG
CCATGACAGTTTCTCCTATATTGGATAGTCTAAATAGTGCTAACTGCTAT
AGGACAGTGCAACTTATGCTCGTTAAGCCAGTGCCCAATAGAATGGCCCA
CACACTTAGTNAGATTGTGGTTAGTGTAATGCTGAAAATTCACTTTTGTT
TAAAAAATAATAATACCACCTATTAATTTAATGTTACTAGTATTTTGTCA
GAAATAAGACATTCACATACGTAGGTTCAAGCTAACTAACAAGTGACTTT
GAAAAGAAGTAGACTTTGCCATTTGGTTAACTTTGCACTTTCATCATCCC
ACAGAATGGAGATGGTGAGCCCCTGTCAAAGAAGATCAAGACAGAAGATA
TAAAAGGTAAAGCTGTCTTGCTGTGTAATGTTTTTACTTACTCAATGCTT
CTTATCTTGGCCATGCATGTCTTGCGCTCATTGCACCAAGTCTGTACCAG
TGCTAACCAAGTAGAGATACCATTGTATATGCTAGACCAGATAAGGAAGG
GAGGACATCAACCAAAAGATTTAAACCTTTTTGCCAGGATTAGGTGAACT
TTCTTCTATGTCAATATTTTGGCTTTTCCCAACCAAAATGTTCCATGCTT
TATCTTCTCTCCTTATAAGGTTTTTTACAGGAGGAACATGAACAACTTTA
AACCTGAAGAGGGAAAGCCATTGAAACCTGAAGGATTTGTCAGGTTGTTC
GCAGGTTTGGTTGTTGACCCATTTTGGCTTGTTGGAAGTCCTTGTTCCAA
CCTCAGCAGCGGGCTCATGTTTCTTGGAATGTGTGAAATGGGATGACTGG
CTGTAGCATACCTAACTCACTTCACAAGGTAGTGTGTGGATCTCCTCTGT
GTTGGCAGTTCGTAGCAGCTTGTTTGCACTGTTTCTATTTGTGACCTCTA
TCCATGGTCTGCTGTGTCATCTTATCAATGTGGATACATCTTGCTCGGAG
ATTTTTTTTCTCTGTTTTTGAGTTTCTGTAGAGCGTACGGTCGGAGCCAT
GTTGTCGTGGGGTTTTCCGACACCAAGGCTTCTCGAAGACTTGCTGAAAG
GTAACAGTAGTGAACTGTAATAGAGCATGTGTGCCTCCAAAAGTGATTAC
ATCATAATGCTGTGAAGAAACTGTCATGGTGTCATGGCTATGCCAGGGGT
TTTGTGTGGTTCACTCTAGAACCCATAGGGTAGAGCCCTTATTGTGTTAG
GCCATGACAGTTTCTCCTATATTGGATAGTCTAAATAGTGCTAACTGCTA
TAGGACAGTGCAACTTATGCTCGTTAAGCCAGTGCCCAATAGAATGGCCC
ACACACTTAGTATAGATGGGGCCCTGGCTTCTCGAGTGTAAGCAGGGTGG
TATAGAGTACTGTCTAGGTTGTGCAGTTTTTATGTTTTCCAGGTTATATG
CACTAAGGGTACTTAGGTATCTCCATGTACTAACCATGTTTTTCTTCTTT
CCAGTTCTTTCTTGTTTCTCCTGCAGGTGCATGCACAACTCAAGGAATTC
TAGGTTCCTCAGTTGTCAGAGTCAGCAAGCATAGTACCTGGGACAAGTTT
ATGGTTGATGCTATATAGCATCTCTGCTTATATTAGTATTCTTCCTTACT
GTGTTGATACTATACTATAGGCTAAAGTGCTGTTGTTGGGTGAATGCTGT
CAGTGCTTGAGTGATTGTTGTTTGGTTCCAAGAAACATGAAGCTGAAGCT
TGCAGGTCCTCCCTTCCACAGGATTGTTAGTAGTGGGCAGTCAGCCTGCA
TGAACCTGCCATGTTAACAGGGCTTTTTTGTTTCTCTTTCTTCTTTTTCT
CTTGTTTGTTGCCACAAAGATCAGATGGTAGAACGAACGCGAGGTTTGAC
GTATGACGTTGGGTGACGCCCGCCAATGCGGCGAACAGCGGGCAACACAA
CAGCTCCAATCCACCGCCATGCCACTCCACATCTTAGGTTCCCTGTCATC
GCCATTTTCAGACTGTAGTCCATTTTTATCGTTACCTAGCACTGTTCGTG
TCTAGACAAACCATAACTGTTGACAGGGATAAAAGATATGTTCTGTTTTT
ATTGAGTCCTAAAGCTGAGGCCACTATAGATGCGTTATTTGCTTGTCATT
TTAAATTATGGGAGCCATCATTTCAAGTAAGGGCGAAGAATTGATAAGTC
CATCTACAGCAAACCCCAACCCGTGATTCGTGCTCAACTTGTTAGATATT
TGGGGAGGGACAGTACTTTTCTTTGGGGAGTGAAGAAGTCTCAAAATAGA
AGTTTGCATGTCAATGGGGAATCAAGGGCTCGCTTGAAATCTGCCATACT
ATGAATAGCTGTGACATGGCTTATTTGTGTAAATGTTGAGGGGAGTGGGA
GGTGGCATAGAGCCCTTTGCGACCACTAACTGATGCATTTTGTCTCCCCT
TCCTGTCTTTTTCTCTTGTGTATTTTTGTATGATGTAGTAATAACCCAGC
AGGAGTGACACCATGTGGACCGGATGGCGCGCTCATGCTTCATATGGCGC
ATCCGCCCTTTATGTTGGCCGCTATGGCCGCCGGGACCGCGATGGGTAAC
ACAACGGAGAAGAAGGTTTTGTGTTAGCTCTTCCCAGTGTCAAAGTGTCT
CTTGTCCTCTACATACAGCATATTCCACACACACATTGCCAGGCAAAGTA
AACTAAATAAAACCATCTGAAATCAATTTCTCATAGGCAAAGCTTTTCAT
TCTTGAGCTCTCTTCTATCTCCGACTTTGTTTTTTTGTTGCCTTTTAAAG
ATTTTGTGGAAGTTTGACTCAGCTTCACATTTCTTTAACTTCAATATTAA
AGGTTAACTCTGAAGAGAGTAATAGACTGTTTGTGTTCAAATCTCCAATT
ACACAAAATAATGGGGACACGCACACGTTCAAACACATAGATCTGTGTCT
GCCAATCAAAATAACACTCTCTCCCTGTACTTGAAAAGGCAGACACATTT
AGGTGGTAATTTAAGGTACTAAGGAGACTTCTTCATGGTTTCAGGAGATG
AAGGAAAGGGAAAGGCCCCTGGGCTACCACCACTGACCAAAGACCAACAA
GAGGCAGTGACAAAGGCAAAGAAATATGCTATGGAGCAGAGCATCAAAAG
TGTGCTAGTGAAACAGACCATTGCACACCAGCAGCAGGTATAGTAACATC
TCTGTTGTTCTGAAAGTGGTGGTTAAATGGTGCATTCTGTTTTCAGTTGA
TAAAAGACAAGTAGATTATTGAGTAAGTAAGGTCATTTGTTAGGTTCTTA
CGTCAATATAGAAATATGTAACAGGCATTGAAAGGATCATGATCAGGCTA
ATAGTGATATACCGAAACAATATAACACCAGTCTTTACATATACAGTCTG
AGTCACAATGTTTTCCACTACAACACATATTATTTGCTTGTGGAAACTTT
TTCTGTTCTGTGTATAGAAGGACATTTCTTAATTCTAGTCTTTATTGTTC
TTCAGCAAATGACCAACTTACAGATTGCAGCCCAGAGACAAAGAGCCTTG
GCCCTTATGTGCAGGTCAGTACATGGGTTAAACAGGTCTGAAAAGACTCT
CATTGTTAATGACATTTGTCAATGTCTTATTGTCTGTGATATTTTGTCAC
CACCTGAAGACTATCTTTTCCCCTCCACATGTCTAATTGTGTTCAACCTA
ACATGTTTTTATAGAATCTATGTTGGATCCATCTACTACGAGTTGCGGGA
GGATACTCTGAAGCAGGCCTTTAGCCCATTTGGTCCC Coding sequence (CDS) from alignment at xpSc0040258:1..4637- >Blg00376.3 ID=Blg00376.3|Name=Blg00376.3|organism=Branchiostoma lanceolatum|type=CDS|length=285bp|location=Sequence derived from alignment at xpSc0040258:1..4637- (Branchiostoma lanceolatum)
ATGGTTTCAGGAGATGAAGGAAAGGGAAAGGCCCCTGGGCTACCACCACT
GACCAAAGACCAACAAGAGGCAGTGACAAAGGCAAAGAAATATGCTATGG
AGCAGAGCATCAAAAGTGTGCTAGTGAAACAGACCATTGCACACCAGCAG
CAGCAAATGACCAACTTACAGATTGCAGCCCAGAGACAAAGAGCCTTGGC
CCTTATGTGCAGAATCTATGTTGGATCCATCTACTACGAGTTGCGGGAGG
ATACTCTGAAGCAGGCCTTTAGCCCATTTGGTCCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00376.3-exon-xpSc0040258-1570713199:4583..4637 | Blg00376.3-exon-xpSc0040258-1570713199:4583..4637 | Branchiostoma lanceolatum | exon |
| Blg00376.3-exon-xpSc0040258-1570713199:601..1913 | Blg00376.3-exon-xpSc0040258-1570713199:601..1913 | Branchiostoma lanceolatum | exon |
| Blg00376.3-exon-xpSc0040258-1570713199:224..282 | Blg00376.3-exon-xpSc0040258-1570713199:224..282 | Branchiostoma lanceolatum | exon |
| Blg00376.3-exon-xpSc0040258-1570713199:1..73 | Blg00376.3-exon-xpSc0040258-1570713199:1..73 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0040258 | genome | xpSc0040258:1..4637 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00376 |
|
