Blg00365.1 (mRNA) - B. lanceolatum

Overview
NameBlg00365.1
Unique NameBlg00365.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0001364:1..2309-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00365.1 ID=Blg00365.1|Name=Blg00365.1|organism=Branchiostoma lanceolatum|type=mRNA|length=2309bp|location=Sequence derived from alignment at xfSc0001364:1..2309- (Branchiostoma lanceolatum)
GTCAAATTTCGCGTCACTACAAGTACATCTACAGGGAAGTACACAACTCC AACCGCGCCGTAAAAGACACACAAGTACCTGAGTGTTCTCCACCAGCAGG GGCAGCCCCAGAGGCCGGCCTGGCGGGGGTAAACTGCAGACGGGAGCGGA CAGAAGTCCGGAGTACGTTCAGCATCGTCGCCATCTTGTGTCCTTCTTGT CCGTGTGGAATGACGGAAAGTCACGTGACCGTCCAAGATGGCGGCGCCCA TGTGGAAAAAAATCGGAAACCTAACAAATTTTGTGTTTTCTTGGTAGTCC TTGGTATGTAGATGATCCTTTATTATATAGGTAAGTGATATTGTCGCTGT TTGTTACAGGCTACATACTGTCACCGTTGTGTTCATCCTGTCAATTTATT AAATGCTGTTTAAAGTGCTGTTATTGGCCTGCCCCTCCCCATAACGTGGG ACCTTTATTCTTCAAGTTCAAGGCCAGGCTAAGGCTACTATGAGATGACA AAGAAAGGACGATCATGGCGCAACAGAAGGAGGAAATCCAAGCAGAAAGA AGAGGGTGTCCAAATTGGTATGATGCCAGAATCTATATTATTATACTCTA TACATTTTATATTTCATATTCCATACTGTGCTTGTTATTAACGTTAACGT GTTACTTTTATAAAATTATTATTTGGACAAAGTTATTTGTGAATAGCAAT ATGTGGTGCAATGCTGTGTGTTGTTACTGCTCTATTCTCTTGAGATGTTG AAGGACAGGCTCAAACATTGTTAAGAACATAGGTGACTGAAATAAGCTTG TATATAGCTATAATAATCTATAGATAAGTGACACACATTACAGGATGACC ATGATGTTGGCCCAATGTGAGTAGTTTGACTTTGAGAACAGGTTAGTCTG TGTAACACAGACTCCAATGTTTGGGGCTTAAATGGCCGCTCCAGGGGGCC AGATGTTGGGTCGGCCACTGCTATAGCGTGAATCAGTCCATTATTAATAA GATAGTGATTTTTCTGTGATAGCCTCACTGATGTCCAGAGATGACAACAT TGAGCTGATGAGATGGCTGAGGAAGAATGGCTTTCGGGAAACTCACCTTG TTCTGACAGACTTTCCAGGTAAGACATACCTCACACATTGTATCTATTGT ATGCCTGCTGACAAAGGAGGTGACTGAAGGAGCAATGTTAGGATTGGAGA AGCTACATAACAGTCAAGGGTAATCTTGTTGTGTTTTCCTGAAAGTATTA AAGGAATGCAAAATGATACCACACAGTCAATATGCATTTGGGTTCTTAAT GACATAATTATATTTGATTTGCTATCCTTATCTTGCTCTTATCATTATTA TTGATAATCATTTCATCATTTCTTGCCATGTTTCCACTTTGTCATACATT GTATGTCCATTTGATTTTTTTTCAGACACAGGGAGAGGAGTCATGACAAC CAGAAATCTAAAGGTAACAATACTTGCTTTCATTTTTTTTCATAGTATGT CAAGGATGCTTTATGATGAACACATCACTCTTGTTGATAAATTGAAGAAG TAAGGATACTTCAAAAATAACCACAAATTTGCTATTTCTTTCAGGAAGGA GATTGTATTGTAAGTTTACCAGAAAACTTGCTCATCACAACAACCACAGT TGTTAACAGCCGTCTTGGCCAATACATAAAAAAGTGAGAATCTTTACTGG TCATTACTTATATATCTAAGTAATCCATTGGTGGATTTTGAGTGTGAAGA GAGACAATTGTAGGTTGTTATGTAATACGTTTTACAGAAGATTGTTGATT TGTTATCATATTCAAAGAGAATAATAAACATTGCATTTTTTTGTCAGCTG GAAACCACATCTCACCCCAAAGCAGGTCCTCAGTTTGTATCTCATTGCTG AGAAATCCCGTGGGAAGGACTCTTTCTGGTATCCATACCTCCAGACTCTA CCAGCATCATACACAACTCCCTCCTACTTTTCAACTGCAGAAGTCGACGC CCTTCCTCCTGCTGTGCGGGAGGCCACCTTGCAACACAGAAAAATACTGC AGAACTCTTACAAATCTTTGAGAACATCCCTGCACACCCTGGAGCCCCTA TTTCCAGACTGGGAGACTGTTTTTACATTTAAGTCCTACCGTTGGGCATG GGCCACAGTGTACACCAGGTCTGTGTACAAGAGAGGCCCAGGGTGGGAGT TCTTGGACCCCAGCGATCGGGATGTGTATGCCTTGGCTCCATTCTTAGAC ATGTTGAACCATTCCCCCTCTGTACAGGTAAGAACCCCAGTACCATGTTT CAGTTTTAA

Coding sequence (CDS) from alignment at xfSc0001364:1..2309-

>Blg00365.1 ID=Blg00365.1|Name=Blg00365.1|organism=Branchiostoma lanceolatum|type=CDS|length=758bp|location=Sequence derived from alignment at xfSc0001364:1..2309- (Branchiostoma lanceolatum)
ATGACAAAGAAAGGACGATCATGGCGCAACAGAAGGAGGAAATCCAAGCA
GAAAGAAGAGGGTGTCCAAATTGCCTCACTGATGTCCAGAGATGACAACA
TTGAGCTGATGAGATGGCTGAGGAAGAATGGCTTTCGGGAAACTCACCTT
GTTCTGACAGACTTTCCAGACACAGGGAGAGGAGTCATGACAACCAGAAA
TCTAAAGGAAGGAGATTGTATTGTAAGTTTACCAGAAAACTTGCTCATCA
CAACAACCACAGTTGTTAACAGCCGTCTTGGCCAATACATAAAAAACTGG
AAACCACATCTCACCCCAAAGCAGGTCCTCAGTTTGTATCTCATTGCTGA
GAAATCCCGTGGGAAGGACTCTTTCTGGTATCCATACCTCCAGACTCTAC
CAGCATCATACACAACTCCCTCCTACTTTTCAACTGCAGAAGTCGACGCC
CTTCCTCCTGCTGTGCGGGAGGCCACCTTGCAACACAGAAAAATACTGCA
GAACTCTTACAAATCTTTGAGAACATCCCTGCACACCCTGGAGCCCCTAT
TTCCAGACTGGGAGACTGTTTTTACATTTAAGTCCTACCGTTGGGCATGG
GCCACAGTGTACACCAGGTCTGTGTACAAGAGAGGCCCAGGGTGGGAGTT
CTTGGACCCCAGCGATCGGGATGTGTATGCCTTGGCTCCATTCTTAGACA
TGTTGAACCATTCCCCCTCTGTACAGGTAAGAACCCCAGTACCATGTTTC
AGTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00365.1Blg00365.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00365.1-exon-xfSc0001364-1570713199:1980..2309Blg00365.1-exon-xfSc0001364-1570713199:1980..2309Branchiostoma lanceolatumexon
Blg00365.1-exon-xfSc0001364-1570713199:1743..1843Blg00365.1-exon-xfSc0001364-1570713199:1743..1843Branchiostoma lanceolatumexon
Blg00365.1-exon-xfSc0001364-1570713199:1192..1287Blg00365.1-exon-xfSc0001364-1570713199:1192..1287Branchiostoma lanceolatumexon
Blg00365.1-exon-xfSc0001364-1570713199:847..884Blg00365.1-exon-xfSc0001364-1570713199:847..884Branchiostoma lanceolatumexon
Blg00365.1-exon-xfSc0001364-1570713199:627..715Blg00365.1-exon-xfSc0001364-1570713199:627..715Branchiostoma lanceolatumexon
Blg00365.1-exon-xfSc0001364-1570713199:1..462Blg00365.1-exon-xfSc0001364-1570713199:1..462Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0001364genomexfSc0001364:1..2309 -
Properties
Property NameValue
GeneIDBlg00365