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Blg00363.2 (mRNA) - B. lanceolatum

Overview
NameBlg00363.2
Unique NameBlg00363.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:1076868..1084645-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00363.2 ID=Blg00363.2|Name=Blg00363.2|organism=Branchiostoma lanceolatum|type=mRNA|length=7778bp|location=Sequence derived from alignment at Sc0000086:1076868..1084645- (Branchiostoma lanceolatum)
AATGTCACAGGACCACGTATTTTGTCTGTAAAGCTATGGTCTATATTTGT TTCTTCAGTTCGTCTAGTGAAAAAATATACTCAGGACTCAGCTGCTATCA TTTTGCCGTTCGTATTCCCTTCGCTAACAAATTGAATTGATAAAGGACCT CACCGTTCTTTCAGATCCTGCAGTTCCGTTGACAGCTTCTCATTCTGTGA ATACAGGTGGGACATTTTGTCGCTACACTGGCTGGCGACCACAAAAACTA ATTGATTTGCGAGTTGCATTGCCCAGTCGTTCATTTCCCTGGCATGTTTT GAAGTTGTTTCACTTGGCCCTGCAGGAATACCAGGCATCTGGTGCGCCAT GCCAGGTCTACCTGCCATGACTGAAGGAATCAAGTGATCCATGTACACTT CGAGCTGACTTTATCCAGACACACAAGTTGTCGAGCAGGTAGAGAGAAAG TCAACTCCGATCAAATATACAAAATTGACACGAGTTGCAAACGATCAATT CGTTTTCATACACATGAAATAGGATATCATTTCGTTTGAAAGTAAAATGT CCCAAATCATAACACTCTTAATGACATAGCAGCATAATAAAGGGTTTCTA GACGTATACAAGGTGAAAGATATATCAAATAGCTCATGACGTAATGTCTG CAATAGAGATCCCAGTGGAATAATGCACTCATAACGCAGAAAGGGGCGGT ATAACCCGACGGTGCGTAAGCACGTCGACTAATGATGATGATGAACGCAG TAAACTTGTCTCGAAATAGAATGTAGACACATATTGTGAGCATCACTTGT TGGCAACTTACACAATATATATGAATTAGATGATACAAAGTTGGTGTCCA CCTACAAAGACCCTCTTTTCTCCTAAATGCCTGGTCAAACAATTACGCCA TATGTTTAACAAGCACTCTGAGAGGCGAACCTGAATCGACTATGGGGATT TAGTCACTCGAGTTAGAATTATTTTGATTTTGATATAGTTTTTTTTTGCA TATTGCAGGATCCTTCCGAATCTGCCTGAAAGGCCTGCGTTTTACAAATC TTGAATAGAGTAGCTATTTATCCCGAGGCGGCTATGTTTTCAGAGAAGTT CGTTTGTGAGGAAAGGGAATGATTATGGGTTTGTTTGTGAACGACATATA ACTCAAGAACCGTTGAGGTAAGCTTGCGATCAGGCCTTTACTCATTAAAG AAATTGAGACTTGATAACCATGTTGAATTCCACGGTCTCACAGAAGAAGT GATAGAACACTTGTTTTCTAAGAAGCTTTCTGTGTAACCTAACTTTAGTA AAAGTCTCTTAAACTGGATGTCAAGTTGTTTTGGCCCGAGTAATCTGGCA AATGAACCCATAAGTACATACAGTGAACAAACAGTTTGGGGGGCGTTGCA GTGACTTACTATAACAAGACCCGATATCACAAGACTCGATATCACAAGAC TCGACATCACAAGACTCGATATCACAAGACCCGATATCACAAGACCCGAT ATCACAAGACCCGATATCACAAGACCCTTTATTATAAAATCACTGTAACA AGACAAGGTGGGAAGCAGCTCGAATATTATTTTTGCATGCGATTGCACAT TTTCTTGAACTGATTGATTTTAGTCAGTGAAGAGCTAGGCTTTTACACAT GTAGTGGCTACTGTTCAAAAGGGGACAAGGATAACAATGGCCAAACAAAC TAGCAAGTACGTGGCTGTGGTGGCCATTGACTTTGGAACCACATTCAGTG GCTTTGCATTCTCCTTCAACCATCGTGAAGGTGAAAGGGGGATATTAGTG AACAAAGCGTGGGGAAGTGATCAAGGGTACCAAGCGTTAAAAACACCGAC GTGTTTACTTCTTGACCCCGAGCAACGCTTCAACAGTTTCGGCTTCGATG CCAAGGAGAAATACGCGGGGCTTGAAGAAGGACTAGACACGGAGTATTAC TTCTTTGACCTATTCAAGATGAATCTATTCAAGGAAGGGAATGAACAGGT GAGATTGATCTGTTATACGACCCAGGGCCAGGCTTTTCATCAGAAGCAGT ATAGTGCCCGCAGTGAAATGCTAAGCGTTCAAATACATTTTTGAAAAACC GAAAAAAAAGACATTACCGGTGTTAAGAGTTATGTTGTAGATTTGGGTGG ACTAACAAGATATGTAGATATCATTACATAAGTTGGATTAGCTACGGGGT GTGCAACCAAAGGAATCTTTTACGTGATCGCTCATCCAGGTCGAATATTT TCATGCTAGTTTTAACAGCAACTTGGTTTAAAGTTCCTCTGCTTCAATCG AATAGTGGTCTGATATTTCCAACTTCATTCAAATCATTGTTATTAATCAA AATGAAATAGACATGATCCACATAATGAATGCTGTGTCTTTAAGTTACTT AAGTCAACTATTATTGATGTAGAAAATGTAATAGTACAATGATTGACTCC ATTTTTATTTAATTTGTGCATTTTAACAGTAAGCCAAAAGGTTACGTTAT GGGTAGATTTTACATTTATATGTATCATACCTGATTACAGACTATCACAA GCGATATCACCATAACTGCAAGAAACGGCAAACAACTGCGAGCAATTGAT GTCTTTGCACACGCCCTGTGTTATCTGAAGGATGAGGCATTGAAAGTCAT GAAAGAGAGGACCTCTGTGAAGTTCACAACAGCCGACATACAGTGGGTCC TGACCGTTCCTGCAATCTGGCAACCCAGTGCCCGCCGGTTTATGAGAGAT GCAGCTTACAAGGTAAGATCTATCAGGGTATATACAAACGGGATTTACCG TCAGACAATGTTACTAGATTCGTCCAAACTACGTGCCCCCCCCCCCCGAA ACTCCAATACGGGCAACTTTAATCATTTTTGGTCGCCAAACCGTTTTTAA AAGTAATTCACTGACTACGTCACTTGATGGAAGCCCACGTCTTAACTTGA CCTTCAGTATGATTTTCGCGATGCCCCGCCTTTATGATGACTTGAATGGG TAAATTAAGCTAAAATCGAAGTACTTTAAGTCTTCTTGATCTATATGAAC ATAATGTAAAGAAAATCTCAACAGGAGGCCGGTCGCGTAATCTGCTATCC TTCTTTTTAGGCTGGGCTGTTAAGCCCCCGAAATCCTGACCAGCTCATCA TTGCCCTTGAGCCAGAGGCAGCGTCCTTGTGGTGTCGTCAGCGAAAGCTG GTCGAATTTGCAGAGGAAACAGACGAAGCACTTGTGCGAGATGTTGTAGC GCGAGATGGCACCAGTTACCTAGTGATTGACTGTGGGGGTAAGGTTCAGA TACTGTAAATGCAGAAATGTTCGCGGTGGTTTTATATTCGCGGTTTTCGG CGTGCACTTAAAACCGCCGCGAAACTTTTTGCCCACCTTGGACGGTAGCG CAATCTATTACTTAATTACATTTAATTACACATTCACAATCCCTGATTTT GTGACATTACGCTCGCCACGGCAAACGCTATTTTAGCTTACATCATTAAT CATTATAAACTAAATTGATAAAAGTTGGTACCAATAAGGACATTATTTGG TACTAAGAAGGAAAATCATCAAGATTTCTCATATTCCTGACTCTTTGCCA GCATGGATGATCCTTAGCCTTGTCGTTATAAGAAAACCACCAGGACTTGC CATAGATTTACTTGAGATAAGGGAGAAATCTTATAATGTGACAAAAAAAA TCAAACGGTTTTTCTTCACGACAGTGCAACATAGACTGTTTGAATGCATT GTTCACGGAATTTTGTTGTTGCTGTCGTTGGTTTATAGGAGGCACTGTCG ACATCACTGCTCATCGAATCCAGCCAGATGACTCCATCCACGAGATCTAC CGAGCGACGGGAGGGGCATGGGGTGGAAGTAAAGTAGATAAGGAGTTAGA GATGAAGCTAACAAATATATTTGGTGTAGACTTTATCCAACGGTATAAGC GATCGCACCCATCTGACTGGTTAGAGATCACTGGGGATTTTGAAATGAAG AAGCGGTCTGAGCGGTCCATTCAAGATCGGTTTACCCGAATCAGACTGCC AACCAGCTTTGTAAACTTCTTCACGAAAACCCACTTTAACACTCAGCTCA GCATTCAAGAAGTCGTTAAACAGCAGTGTCCTAACGGTGACGTAGCGATT AACAAAGACTACCTTTGTCTTAAGGGTGACATTATGAAAGAAATATTCAG CCCTGCTGTCAATTCTATCGTTGAGCACGTTGACAACCTCCTTCGCAAAC GCGAGTTACAGGATGTGAAGTATTTCTTCCTTGTGGGTGGGTTTTCAGGG GCTGCAGCTCTGCAAAAGGCCATCCGAGACAAGTTTAATAATGGGTACCG TATCTTAGTACCTGCTGAACCCGAAATGGCCGTTGTAAAGGGTGCGGTTA TGTTTGGGAATACCCCAAAGATCATTCAAAGGAGGATCATTGCGAGGACA TATGGCGTTAAGGTGTCTAACCCCTTTATAGCGGGAGTTCACCCTGAAAG CAAGAAGTTCTTAACGAGCACTGGAGCCCCAAAATGTAAAGACATATTTT CTACTCTCGTAAGGACGGGCGATGCGGTGCTCATTGGCGAAAGTAAAACA CACACATTTAACCCTCTTGAGCCTGACCAGACAGAGATTTCTTTTGACTT TTACATAACTCAATCAGAGAATCCAACGTTTGTAGACGAGGAAGGAGTGA TCCGTGAAGGGTGTAGTATCACGGTTATGAGCCCAGATATCTCAAAAGGT ACAAACAGGCAAATAGAATTGAAGATCATGTTTGGGGGAACAGAAATCAC AGTTACCGCTATTGATGTTGAGTCAGGTTCACATGTTACGTCCCATGTCA GTCTGATCACAAAAGATGGCAAAGGAGAAGAATCATTTTTATCAACATTG AGCATTGGAGACATAGACGCTTCTGACAATTGACACGCAGTAGTTTTAGT ACATTTGTGTTTAACCCAACATGCTAAATTTCGTTTGGGTAATCTCATTT TTAGTTCAGCTTTTTCCATTTTGTGTTATAAAATTGTGTCAACTAATGGA TCTGAATGAACGCATACAAATCAAAGTCAAAACCCCGCTTTGACTGTATG TGCCACCAATAAGTCGTTATCCTGTTATGACTAAACTGAGACATAGAAAC GTATCGATAGATAAAAAAGGCATCTGCTGTTATAAATCTGACAGTTTGTC CTACAATGATCTCTAGCCAGTTAGTCAATAGATCGTTATAAAAGATTCCA AGGAATGTAGTCTATTGGAGTATCTAGCTACAAGAGAAAAGTAGGGTTTT CCCCTGCCATACTTTGGTAGGATGGACATGTAGTGTAATGCTCACCATTT TAATGAGGTTTGAAATGTACATTTGCGTCGTGGGACATCATTTCTAAGTT AAATTCATATGTAGGGGGAAATGCATCCATCCCGAGCCCTAACATCCCAG CATGCATTGCAATGCACATTCCAAAATACACATCCCAGATGGCTGATTGT GAACAACAAACGCATAGACTTGTCATGTTGCGTACAATTTTTACAAATTT TATTGTCAAGATAGTAAATTAGTCCATGACACTGACTTAATGAAGATTGT GCAATAAACACTGTTGCATATATTCAGTTCAATTATGGTGCTTAAACATA CTACAGTGCAAGTATTGATTAATTTTGTAATACTGATTGTGATTAGTAAA GTAAAGAAAATTGTATTTGTTTACAATTATTACAAAACAATATCAAATGT CATTTTCTTTACTTTCCCGTGGGTGCTCTCTGATGGACTTTGGTTATTCT GATGTAGAAAAGCACTGACGTCTGGTTTGGTACCATAATTGAAGCGAGTA TTTTCATCAATGTTCCACCAGTGTTTACTATATAATGTTAGAATGTTGTG CAGAAGTCAGACAATCTCATTGAGTACTTTGTCTTTTGAAATTAAAATTT ACAGATCAAATTATAACAGTTACTGTAGTGTCAAAGGCAACACGAAAGGG CTGTCATATTGATAAAGTTGGTCACAGTCAGCCATCTGGAATGTGTATTG TGGAATGTTGGAATGTACATTGCAATGCACCCTGGGATAGCTTCATTTTC CATATGCATATGCAATGCTGTAATGGGTCTATTAAAACCATAAGGAGGTA ATTGAAAAGAATGTGAAAACCCAGGATCTAAAAAACAAAAGATATACGTT TTAGAGGAGTCCTAAACTCCAGAAGGCGGTGTTTTTCCCACTAGATTATG TAATAATTGATACATAATCAGTCGACTTTTTACAGAATTCTGCTTGTGGT GAATTGCACAAGGTGTGTTTTTTAAAACAATATGACAGTCACTAAACCCG TGCAGACCCTACCCATGTATTCCCTATGCGTAAACATACATCTTTAATCG TGGATATTTTTGGCATAAATAAGGGGGGTTAAGCACAATAAGAAGGCCAA TTCTTAATAAGATATAAAAGAACACATAGCAAGACGAGTTTTTTGTTAAC CCCCTGACATTCTTTTTGTAATCTAACTTTTGTTAGGCTTTGTCAGGCAA TTTGGGGAATTCGGTAGAATACTGAATGCTTTTTGATGCGCACGGGATTA GTGGGTACTTTATCGTATACTGTAAAAAGTATTCATTTTTACTTCCTAAA ATTATCATCTATTGGAAAATAACTCTCCCCTCTGGAGTTTAGGACTCCTT TAAGAGTGTCAAGTTGAACCCAACTTGTAAATCACCAATGCTGGGAAGAC ACTGGTAACATGGTTCAGATATTACAGTCTCCATGGCTTTTTGGCTGATT TCATAAACAGAATAAGAAAATAGTATAAACAATAGAATTGATAAACAATC GAAAAGGTCCGTCCAAAATTTCAGCATTATAATCATTGAATATCATATTC CGGTAGTCAAAACAACTTTTTAGCTGATTCAGTAGAAAGTTTGAAGACTG TTGTGATATATCATAATCAAACCGAGCTAAAATAGGGAGCTTTTACGTCT ATGGTAGAATCCTGCTGGCAAGATCTGAGGGGGCTGAAGAAAAAAGTGAG AAATATGACTGATGGCACAGAAAGAGGACAAAGACCAAGTAAGGTAGAGG AAAGTAAAAAAAAAAAAATTGATGTCACTATAAGCATGGTATATCGTATT ACAGTTCTAGTGAATCTTTACGTTCTGTTGCTAAATCGTGTAAATTCAAT GTTGATAATTGTTAAAAATATTAAAGATTGGAAGTTGATGTGCTGATAAG ATAAGATGTTGATATGTCAGCGAATATAATTAGATGCTATTTTAACACAT ACAAATATGACACTTTTGCATTTCTGACTTATGTTTAATGAATAACAATA CTAGGGTACTTGTATTGTAATATCTATCCGTCAGTGTCGACGTGTTAATT CAAATCGAATCGATCATTTTGACAACAAACTTAACAGTAGGTATGTTGAT AAAAATGATCAAGGATATTTTCTACATGTGGCGACGATCTTTTTTACATT TGTTAGATTTTAGAATGAAGCAATAATGTAAATACAATTCCTAGCACCTG TATTGCCATATACATGTATGGCTTCAAAATTGAAATAAAATTGAACGTGT GTCAAGAGCTAAGGATGTGTTGAGTGTTGCTGTTGGAAAATCCATGAATC CTCAGACAGTTTTCCGGATAGGTACCACAATTTGATTACTATAGTTTCCC TTAAACCCCTATCTAGCTGGGTTGAAACTTGTTGGCGACTAGTGTGGTTT GTAGTGCGCCAACTTGTCTCCTGTAGTG

Coding sequence (CDS) from alignment at Sc0000086:1076868..1084645-

>Blg00363.2 ID=Blg00363.2|Name=Blg00363.2|organism=Branchiostoma lanceolatum|type=CDS|length=1857bp|location=Sequence derived from alignment at Sc0000086:1076868..1084645- (Branchiostoma lanceolatum)
ATGGCCAAACAAACTAGCAAGTACGTGGCTGTGGTGGCCATTGACTTTGG
AACCACATTCAGTGGCTTTGCATTCTCCTTCAACCATCGTGAAGGTGAAA
GGGGGATATTAGTGAACAAAGCGTGGGGAAGTGATCAAGGGTACCAAGCG
TTAAAAACACCGACGTGTTTACTTCTTGACCCCGAGCAACGCTTCAACAG
TTTCGGCTTCGATGCCAAGGAGAAATACGCGGGGCTTGAAGAAGGACTAG
ACACGGAGTATTACTTCTTTGACCTATTCAAGATGAATCTATTCAAGGAA
GGGAATGAACAGACTATCACAAGCGATATCACCATAACTGCAAGAAACGG
CAAACAACTGCGAGCAATTGATGTCTTTGCACACGCCCTGTGTTATCTGA
AGGATGAGGCATTGAAAGTCATGAAAGAGAGGACCTCTGTGAAGTTCACA
ACAGCCGACATACAGTGGGTCCTGACCGTTCCTGCAATCTGGCAACCCAG
TGCCCGCCGGTTTATGAGAGATGCAGCTTACAAGGCTGGGCTGTTAAGCC
CCCGAAATCCTGACCAGCTCATCATTGCCCTTGAGCCAGAGGCAGCGTCC
TTGTGGTGTCGTCAGCGAAAGCTGGTCGAATTTGCAGAGGAAACAGACGA
AGCACTTGTGCGAGATGTTGTAGCGCGAGATGGCACCAGTTACCTAGTGA
TTGACTGTGGGGGAGGCACTGTCGACATCACTGCTCATCGAATCCAGCCA
GATGACTCCATCCACGAGATCTACCGAGCGACGGGAGGGGCATGGGGTGG
AAGTAAAGTAGATAAGGAGTTAGAGATGAAGCTAACAAATATATTTGGTG
TAGACTTTATCCAACGGTATAAGCGATCGCACCCATCTGACTGGTTAGAG
ATCACTGGGGATTTTGAAATGAAGAAGCGGTCTGAGCGGTCCATTCAAGA
TCGGTTTACCCGAATCAGACTGCCAACCAGCTTTGTAAACTTCTTCACGA
AAACCCACTTTAACACTCAGCTCAGCATTCAAGAAGTCGTTAAACAGCAG
TGTCCTAACGGTGACGTAGCGATTAACAAAGACTACCTTTGTCTTAAGGG
TGACATTATGAAAGAAATATTCAGCCCTGCTGTCAATTCTATCGTTGAGC
ACGTTGACAACCTCCTTCGCAAACGCGAGTTACAGGATGTGAAGTATTTC
TTCCTTGTGGGTGGGTTTTCAGGGGCTGCAGCTCTGCAAAAGGCCATCCG
AGACAAGTTTAATAATGGGTACCGTATCTTAGTACCTGCTGAACCCGAAA
TGGCCGTTGTAAAGGGTGCGGTTATGTTTGGGAATACCCCAAAGATCATT
CAAAGGAGGATCATTGCGAGGACATATGGCGTTAAGGTGTCTAACCCCTT
TATAGCGGGAGTTCACCCTGAAAGCAAGAAGTTCTTAACGAGCACTGGAG
CCCCAAAATGTAAAGACATATTTTCTACTCTCGTAAGGACGGGCGATGCG
GTGCTCATTGGCGAAAGTAAAACACACACATTTAACCCTCTTGAGCCTGA
CCAGACAGAGATTTCTTTTGACTTTTACATAACTCAATCAGAGAATCCAA
CGTTTGTAGACGAGGAAGGAGTGATCCGTGAAGGGTGTAGTATCACGGTT
ATGAGCCCAGATATCTCAAAAGGTACAAACAGGCAAATAGAATTGAAGAT
CATGTTTGGGGGAACAGAAATCACAGTTACCGCTATTGATGTTGAGTCAG
GTTCACATGTTACGTCCCATGTCAGTCTGATCACAAAAGATGGCAAAGGA
GAAGAATCATTTTTATCAACATTGAGCATTGGAGACATAGACGCTTCTGA
CAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00363.2Blg00363.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00363.2-exon-Sc0000086-1570713199:1082648..1084645Blg00363.2-exon-Sc0000086-1570713199:1082648..1084645Branchiostoma lanceolatumexon
Blg00363.2-exon-Sc0000086-1570713199:1081884..1082105Blg00363.2-exon-Sc0000086-1570713199:1081884..1082105Branchiostoma lanceolatumexon
Blg00363.2-exon-Sc0000086-1570713199:1081358..1081535Blg00363.2-exon-Sc0000086-1570713199:1081358..1081535Branchiostoma lanceolatumexon
Blg00363.2-exon-Sc0000086-1570713199:1076868..1080857Blg00363.2-exon-Sc0000086-1570713199:1076868..1080857Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:1076868..1084645 -
Properties
Property NameValue
GeneIDBlg00363