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Blg00361.0 (mRNA) - B. lanceolatum

Overview
NameBlg00361.0
Unique NameBlg00361.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:708641..711312+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00361.0 ID=Blg00361.0|Name=Blg00361.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2672bp|location=Sequence derived from alignment at Sc0000086:708641..711312+ (Branchiostoma lanceolatum)
ATGATCATGGCGAGAGGACCCCGGGCCTTCAACGTCTTCTGTGCCGCTTT ACAACGGTGTGGATACCCGGGACTCGCGGCCAAACTGCTCAGGCCTATCG CCACCAAGACAGGTAACTTGTGTTATATCTTATCTATTTGAACATTGTAA ACACTTCCATCTAATTTTGCATAGCTCATAACATTGGAAAGCCGCGTTGT GTTCACAGCGTTTATCAGGGTTACATTGCGATGACTTGTCGTCATGGTGC ATGTATGTTGCAGACTCAAGTACTTGCTAGTTATTAGTTTCCGTTCCACA AAAGTATGTACATAGTGACCTAGTACCTATCTACAGTATTTGCGACCAGA AATATCATTCAACACCTTTCCTAACAACACGCACGACTTTTTTCACCCCA CAGAGCTGAAGGTACCATCCGTCCGTCTAAAGGACCAGCAGTCTTCCATG GCTTCCATGTCCAGTTCTGTAAAGGACCTGTCTCTGGGCGAGTCGACTAT TTCCCCGGGGATTTCCAGCAGTCTCTACGCTCCTAGCACCATCGGACGTC TCCCCATGGTTAACGACTACGTCGCCAAGTCGTACGACGACAAAGGTTTG TGTTTATATAACATATTGTGATCTCGTGTGTGCTGTGTGGGGACTGAGCA AAAACCTAAATACTAATACCTAAGTTTCTGCCGAATTGTTCAGGCCAGAT ACTATGCCCTTCTATCTCTTCCCAAGCAGTACGGACCTTAGCCGCTGTTT AAGCATCTTCTATGTCAAGTTTTACATTCTGCTCACTAATTTACTGACTT CAAGGTAGAAACAATTGTTCTATTAGTAAAAAATGAATAGTATGCATTTT TCTAATTCTTGGTTTATCCCAATTTTTCAACAAATTATGTGGATACATCA TCATACACTTTTGTTTAACTTTGATTTTTATATGGATTGATGTTAACATA GTAAATACAACACGTTACTTACTTTATGTTTTATCAACCTGTATTTGTAG GTATCGAGGCTCAACACAAGCTGGCACTGCAGCGTCACCGCCTGACTATC ATCCGTCACCTGGACGTGCGCGACATCCGGGACTACATGCTGAAGAACCA CGCCATCAAGGAGGCGGACATGGCCGCCATCCTGACTCAGCTCACCCGAC AGGACGAAGCAACCAAACTGGTGGACATCCTGAGCCAGAGGTGTGGATCT TTACTCGGTGTTCTGTCTTAGTCTACACAGGAAAAATCCACTGGTTTCGA AAACCTTCTTTGACAATTTTGACTCTGAAGTGGTTACTGAAAATTACAAT GAATTTGGTCTGAATCATGGCGCAATATAGAGCACCAAGTTCAAGGCAGT AGTTTAGGGAATATCTACGAAGGACGACAACGACAAATTTCCAGTGCGTT GCTGACGAAATATTCTTGCCCTCAGACGAGGAAATGATTTGCGCAGGTGG GAAAATTTGTGTTATGGTCCTTCGGAAATATGACCACTTCAAAATTACAC CACGATGCTTCTAACTACTGCACGTCGCGACGTCAGTTCTTAGGTATCGT TTTCTGAAATGTTCACAATTGAACAGGTTGGGACCTCTTTATTGTTTTAT AGCTGAGTTTAATGTTATTTCTATTACCCACAGGCCCGAACATGGCTTCC CGATATTCTGCAAAGCACTCCAGAAGTACGGATACCCGGCTTTAGCAAGA CAGCTGACAAGACCAACCCATCTGCCATCAGGTAAGAAGGAAGAGAACGA ACTCTGCTGTGTTGTACACGTGTTACCTCAAGTCTCTATTCAAAAGCACG CAGAGGGAAGATATTCCGTTTCCTTGTTGTCATGGTATCATTAAAAATTT GCACCGCTAAGTTTCGCGAGATCTCATGAATGGACCAGGGTAATAATGCA TTGTAATGAAACAAGGGATAAATATTAATTTTTCAAGCAAAATCGTCTGC TATTTCAAATTCCATTTACACAGAATGCACCTGCATATGATAGAAACATG AAACATTGCATCCAAAAGAAGACAGCCTAGGGAAGATCTATTTTGAGAAA TGGTTTCAACTTTTTGTAGGAGATGTTACTTGCTGTAGATTACGCTGTAA CCTACTAACCAAAAATGCCAATGTATGATAACGTTACATCAAAATAGGAA TTCCAAGAATTCTTATCCTTTATTCTCATAACCCAGTGCGAGCTCGCCCA GTGAGAGGACTGCCTCCACGGGGAAGGCACTATGGAACACTGCCACCATG GGGCAATCGTAAGTTGAACTCCATTATCATTATTGACATAGTCATGACTA ACATTGCCCCTGAACTTATGACTACATAAATTTAGGAAACAGTGGAGTCA TTAGAAGATTGAAAAATGGACTTGACTAACCACTTTCTCGTTTGTTTTGA GTCCATTGCAGGTATGTTCTTCAACTTCGGTTTTTATTTGTTTTTCTATT ATAGTCATCTTCTCATCATGACCTTGTCTAACAATATGCATTGTGTTATC TATTTCAGGTAAGAAGGTAAACATGGGAGCCAGGGCGATGCCATTCCAAA CCAACCTGGGAAAGAGACGAGGTGGCGGCAGCATCACCCTGGGAAGACTT CCCCCCATCGACAAGACTAGTTCATCGTGGGAGACGTTAACCTCTACTGA CGTCATGGACATGTCACACTAG

Coding sequence (CDS) from alignment at Sc0000086:708641..711312+

>Blg00361.0 ID=Blg00361.0|Name=Blg00361.0|organism=Branchiostoma lanceolatum|type=CDS|length=828bp|location=Sequence derived from alignment at Sc0000086:708641..711312+ (Branchiostoma lanceolatum)
ATGATCATGGCGAGAGGACCCCGGGCCTTCAACGTCTTCTGTGCCGCTTT
ACAACGGTGTGGATACCCGGGACTCGCGGCCAAACTGCTCAGGCCTATCG
CCACCAAGACAGAGCTGAAGGTACCATCCGTCCGTCTAAAGGACCAGCAG
TCTTCCATGGCTTCCATGTCCAGTTCTGTAAAGGACCTGTCTCTGGGCGA
GTCGACTATTTCCCCGGGGATTTCCAGCAGTCTCTACGCTCCTAGCACCA
TCGGACGTCTCCCCATGGTTAACGACTACGTCGCCAAGTCGTACGACGAC
AAAGGTATCGAGGCTCAACACAAGCTGGCACTGCAGCGTCACCGCCTGAC
TATCATCCGTCACCTGGACGTGCGCGACATCCGGGACTACATGCTGAAGA
ACCACGCCATCAAGGAGGCGGACATGGCCGCCATCCTGACTCAGCTCACC
CGACAGGACGAAGCAACCAAACTGGTGGACATCCTGAGCCAGAGGCCCGA
ACATGGCTTCCCGATATTCTGCAAAGCACTCCAGAAGTACGGATACCCGG
CTTTAGCAAGACAGCTGACAAGACCAACCCATCTGCCATCAGTGCGAGCT
CGCCCAGTGAGAGGACTGCCTCCACGGGGAAGGCACTATGGAACACTGCC
ACCATGGGGCAATCGTAAGAAGGTAAACATGGGAGCCAGGGCGATGCCAT
TCCAAACCAACCTGGGAAAGAGACGAGGTGGCGGCAGCATCACCCTGGGA
AGACTTCCCCCCATCGACAAGACTAGTTCATCGTGGGAGACGTTAACCTC
TACTGACGTCATGGACATGTCACACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00361.0Blg00361.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00361.0-exon-Sc0000086-1570713199:708641..708752Blg00361.0-exon-Sc0000086-1570713199:708641..708752Branchiostoma lanceolatumexon
Blg00361.0-exon-Sc0000086-1570713199:709044..709235Blg00361.0-exon-Sc0000086-1570713199:709044..709235Branchiostoma lanceolatumexon
Blg00361.0-exon-Sc0000086-1570713199:709641..709830Blg00361.0-exon-Sc0000086-1570713199:709641..709830Branchiostoma lanceolatumexon
Blg00361.0-exon-Sc0000086-1570713199:710274..710371Blg00361.0-exon-Sc0000086-1570713199:710274..710371Branchiostoma lanceolatumexon
Blg00361.0-exon-Sc0000086-1570713199:710827..710898Blg00361.0-exon-Sc0000086-1570713199:710827..710898Branchiostoma lanceolatumexon
Blg00361.0-exon-Sc0000086-1570713199:711149..711312Blg00361.0-exon-Sc0000086-1570713199:711149..711312Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:708641..711312 +
Properties
Property NameValue
GeneIDBlg00361