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Blg00359.0 (mRNA) - B. lanceolatum

Overview
NameBlg00359.0
Unique NameBlg00359.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:1058418..1060691+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00359.0 ID=Blg00359.0|Name=Blg00359.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2274bp|location=Sequence derived from alignment at Sc0000086:1058418..1060691+ (Branchiostoma lanceolatum)
ATGGGTACTTTGTGTAGAAGGAAGCCGGGACGGCCCGTTGATCCACCGGA CGGGGGATGGGGGTGGATGGTCGCCCTGGCCGGTTTTGTTGTGAGCGCAT GCTCGTACGGAGTGATGCGGTCCCTCGGAGTGTTCTTCGTGACTTGGCAG GACTACTTTTCTGTGACCGCCGCTGAAACTGGCCTTATACAGTCTATCAT CACCGGTGTTTTAAACCTGGCAGGTGAGGAAAGAAACCTACACATCATCA TACAAAAGTGAAATCTTATCGTCTTCCACAAATATCGGACGCAATAAACA ATGCAATGTAAACCTACTGTTCAAATACATGTATCTTCAATATTTTGTAT GAGAGCATATTCAATGGTGACACCGTGACAGTAAGATATACCACATAGCA TACCACAAACTATAACATTTTATAATCACACATCTGCCACCCCTTCCGGC AGCACCAATCGCGGGAGCTCTGAGCAACAGGTTCGGGTGCAGAGTTGTGG TCATGGCCGGCGGAGTGATATCTTCGGCAGGATTCTTGCTCAGTCTTTGG GCCACATCACTCTTTCATATCTACGTTACCGTTGGGTTTCTGACAGGTTT GTCCCACTATAAACTATATTTGTCTTACCTGCAAACATAGTTCTGGCCTG TTGACTATATGTTGACGTACTGAAAATTGCTTTAACATCATTGATTAGAT CTTATATGGATTGTGGACTGATGCATTCAAGTGTAGACTAATGTTATAAC ATAAAAAATCGAAATTATGCTGTATAACTGCATCTTATTAAATTCGATAA TCCTGCGGTGTTTACGCTTTATCACATATTTAGGTTGAAAAAATTTTCTG TTCCCAATCCGCAGGGTTTGGATACTCCCTATCCTTGATCACTACCATGG CAACAATAGGACGATATTTCACCACTCACAGACTTCGCGCCAACAGTATC GCGGCTATAGGTGCCAGCTTTGTGTCTTTCGCGTTCCCTCCACTATTCCA GTACCTCATGGACGAGTACACTTGGAGGGGTGCTTTAGTTATAATCGGAG GGATCGTTCTTCAGGTAGCCGGGTTTGGGGCATTGGAACGACCCATTTTG CTAAAAGGCGACGTCACCGCGGATAAAAGTTCGGAAAACGTCCAAGAATC TTCACCACAAAGTAGTAGATTTCCAGACAAGATAAATGTAAACGTCACGA CAGAGAAGCATTCTTTAACCAAAGTTATCTTAGGTAAGATAAGTTCCGTC ATAGACATTACGCTGCTGACAGAGCCACGGTTCTTAGTGTTTTGCGTGGC CGTTTTTTTGTTCGGATTCGGTCGGTTTGTTCCTAATATCTACATCGTTC CACGCGCACGGGCCTTCGGTGTCGAAGAATACCCCTCAGCCTTTCTGCTG TCCATCCTCGCCATAGGAGACATCATCGGCCGAGCGTCGGTAGGTCTACT GCCGGAGTGGCCGAGGTTCAGGCGTGTGGATCAGTACGCCATGAACACGT TCCTTATGGGCTTCATCACCCTGTTCGCCCCTCTTGCTAAGACCTACGTC ACCATGGCAGTGTACAGCGGGTTCTATGGTTTACTCATGGGCGGGTGTGT GCCGCTCTTGTATTCTGCCATTGCAGAAATCGGGGGAGCCAACAGGATGT CGAGTGCTCTTGGGATCATCATGTTCTTGCGAGGGATAGGAAACCTTGCA GGACCACCTTTTTCAGGTGAATATTCTTTTTAGTCAGATGTTCACATATC ATGATATAATTGTCCATGTCAGTCTACCATTAGTAGCAGCACCTATACTT GGTCTACGCTATATACGCATGATGGCGAATTGATGGTTCACTGTCTGTGG TTTATTCGTAACGTAAATCTTTATTCTATTTCTTCATTGATTTCTAGCAG ATCGTCATTTTGTATGCTAACAATATACCTAGCTGACGTGTAATGTCATC TTGATGATTTTGCTTGAAATGATTGCCGTTTTTATGATGTTGCATTTTTG TCTTTATTTGTATCGAACAGGGTGGCTACGGGACATCACAGGCAGTTTCG ACGCGACACTGCTGGAAGGCGGAAGCTGCTTGGTACTTGCGGGACTGTTG CCGTTTGTACTTCACCTGCGCGTGTTCCAACCCACGAAACCGGAGGGCAA AGTTGAGGAACATGAAATTGACGGTACCAGACTATCTCTGTTGGCTACAG AGCGCGAGGAATCAAACACAGCCTCTACTCAAGGTCATGAAACATCGGTT GTCATAAAAGAAACGGCCTTGTGA

Coding sequence (CDS) from alignment at Sc0000086:1058418..1060691+

>Blg00359.0 ID=Blg00359.0|Name=Blg00359.0|organism=Branchiostoma lanceolatum|type=CDS|length=1473bp|location=Sequence derived from alignment at Sc0000086:1058418..1060691+ (Branchiostoma lanceolatum)
ATGGGTACTTTGTGTAGAAGGAAGCCGGGACGGCCCGTTGATCCACCGGA
CGGGGGATGGGGGTGGATGGTCGCCCTGGCCGGTTTTGTTGTGAGCGCAT
GCTCGTACGGAGTGATGCGGTCCCTCGGAGTGTTCTTCGTGACTTGGCAG
GACTACTTTTCTGTGACCGCCGCTGAAACTGGCCTTATACAGTCTATCAT
CACCGGTGTTTTAAACCTGGCAGCACCAATCGCGGGAGCTCTGAGCAACA
GGTTCGGGTGCAGAGTTGTGGTCATGGCCGGCGGAGTGATATCTTCGGCA
GGATTCTTGCTCAGTCTTTGGGCCACATCACTCTTTCATATCTACGTTAC
CGTTGGGTTTCTGACAGGGTTTGGATACTCCCTATCCTTGATCACTACCA
TGGCAACAATAGGACGATATTTCACCACTCACAGACTTCGCGCCAACAGT
ATCGCGGCTATAGGTGCCAGCTTTGTGTCTTTCGCGTTCCCTCCACTATT
CCAGTACCTCATGGACGAGTACACTTGGAGGGGTGCTTTAGTTATAATCG
GAGGGATCGTTCTTCAGGTAGCCGGGTTTGGGGCATTGGAACGACCCATT
TTGCTAAAAGGCGACGTCACCGCGGATAAAAGTTCGGAAAACGTCCAAGA
ATCTTCACCACAAAGTAGTAGATTTCCAGACAAGATAAATGTAAACGTCA
CGACAGAGAAGCATTCTTTAACCAAAGTTATCTTAGGTAAGATAAGTTCC
GTCATAGACATTACGCTGCTGACAGAGCCACGGTTCTTAGTGTTTTGCGT
GGCCGTTTTTTTGTTCGGATTCGGTCGGTTTGTTCCTAATATCTACATCG
TTCCACGCGCACGGGCCTTCGGTGTCGAAGAATACCCCTCAGCCTTTCTG
CTGTCCATCCTCGCCATAGGAGACATCATCGGCCGAGCGTCGGTAGGTCT
ACTGCCGGAGTGGCCGAGGTTCAGGCGTGTGGATCAGTACGCCATGAACA
CGTTCCTTATGGGCTTCATCACCCTGTTCGCCCCTCTTGCTAAGACCTAC
GTCACCATGGCAGTGTACAGCGGGTTCTATGGTTTACTCATGGGCGGGTG
TGTGCCGCTCTTGTATTCTGCCATTGCAGAAATCGGGGGAGCCAACAGGA
TGTCGAGTGCTCTTGGGATCATCATGTTCTTGCGAGGGATAGGAAACCTT
GCAGGACCACCTTTTTCAGGGTGGCTACGGGACATCACAGGCAGTTTCGA
CGCGACACTGCTGGAAGGCGGAAGCTGCTTGGTACTTGCGGGACTGTTGC
CGTTTGTACTTCACCTGCGCGTGTTCCAACCCACGAAACCGGAGGGCAAA
GTTGAGGAACATGAAATTGACGGTACCAGACTATCTCTGTTGGCTACAGA
GCGCGAGGAATCAAACACAGCCTCTACTCAAGGTCATGAAACATCGGTTG
TCATAAAAGAAACGGCCTTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00359.0Blg00359.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00359.0-exon-Sc0000086-1570713199:1058418..1058640Blg00359.0-exon-Sc0000086-1570713199:1058418..1058640Branchiostoma lanceolatumexon
Blg00359.0-exon-Sc0000086-1570713199:1058870..1059013Blg00359.0-exon-Sc0000086-1570713199:1058870..1059013Branchiostoma lanceolatumexon
Blg00359.0-exon-Sc0000086-1570713199:1059282..1060133Blg00359.0-exon-Sc0000086-1570713199:1059282..1060133Branchiostoma lanceolatumexon
Blg00359.0-exon-Sc0000086-1570713199:1060438..1060691Blg00359.0-exon-Sc0000086-1570713199:1060438..1060691Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:1058418..1060691 +
Properties
Property NameValue
GeneIDBlg00359