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Blg00358.2 (mRNA) - B. lanceolatum

Overview
NameBlg00358.2
Unique NameBlg00358.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:1128939..1132694-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00358.2 ID=Blg00358.2|Name=Blg00358.2|organism=Branchiostoma lanceolatum|type=mRNA|length=3756bp|location=Sequence derived from alignment at Sc0000086:1128939..1132694- (Branchiostoma lanceolatum)
TAGCGATCCCGTGATTGGCAACGTTGCATTTCTATATCAAAATTACAAAA ATCCAAACTAAACTTTGAATGTGCAATTCGCTTTTAACCCTTGAGCACCG AAGTACCAAATTTTCAACCCCAAACGTTTGGCATTTTCTCGAAAATTGGC ACAAGGGTATGGTAACATGACAAGCAGTACAATAACGTAAACAATACTGT CTTTTGTTCGGTAAGGTGATTCCCCGGAGTCTGGTACTTTCCACTTAGTC ACAGGACCAGTGAAACTAGTACGCAGCAAAATCATTTGGTAACAGCACAC TGAGAGAGTATACAGACCAAGCATGGCGCGTTTTCTCGGTATGAGTCATT TCTCGATTGTCCTCTGTTGTGTAGTTTTGGTCATTGTTGGGATTGTAGAG GGGACGAGCTCTTCAGAAGAACAAGCGGATAGAAGATGCGACGTGGACAA GTATTATGACGAGTTTACGAGGAACTGCGAGGCTTGTAGCCTGTTGTGCG AGGTGGCACGGGATACCATGAAAGAATGCGAGCAGAAGTGTGGAGGTAAG AAAAAACAGGGCAAGGTATTTCTCAGCTGTCTGTTCGTGTTTCAGACCGT AAAAATCCTCGAGTCATTCTAAATTCATATTTTCTGGAATTGTAATTAAA TTCCATGGAAACGGGCGTGGTCACTTGATGTTTGATTCCATGATGTATTG ATATTTGATACTCCCAAAATTCAAGAAAATATGCAATTGCATGTAGAAGA TTGGAATGAATGTCAACCAAACAATAATCGGTTCCATTAATCCATCTATG GTAATTTTCTTTTTACTGCTGGAATTTCCCTCACGTCATTTTGGGGGGGC TTTCCCTTGAGGACTTTACCCCCGGACTCCCCCTACTGTTGAAATTGATA TTAATGACGGGTGGGTTTGACTCCTGGCCAAGTCAAATAGGGCTCTGCTT GAACACGTATATAACACTGCAAGCCATTTTATAGGTATGGGAAATATAAG TCTTTATTATCTCCATGAAAAATGGGGATATAGTTTTGGGTGTGTCTGTG TGGGTGTTTGTTTGTCTGTCTGTCTGTTTGTGTTTCTGCACTACTGTAGT CAGCATAACTCAAGAACCTCTTGATAGATTATGATGATATTTGGTATGTG GGCAGGTGTTGTGAAGCCGAAGTTCAAGGTCGATTTTGGGCCCCCTGGTA TGTGACCTTGGTACTGCAACAGAACTTCCGTTTTTATCTTTTGACCTGGA CGCGTGCTCTGGTCTTGATTTTTGGATGACTGATAGCTTGTGATGTAATA AAAAAGTAATGTAGGTTTGGGCCCCCTAGCAGCTTGTTATTTTACTGCAT TGGTGATTATGTAGTACTAGTAGTATCAGGTAAGTTTGCAAGTACATTTT GCTGTATCTCTCTAAGTTGAACCTTTTTCTGTTTGTGTTTGACAGACTAC CTGGCCATTTTACAACGGCAGACGACAACACTCGTGTACAGGCTACGCCA CGGTCATCACGGGGGTCAAGGTCACGGCACAGGGGAAGCAGTCCGGGTCG ACAACGGTAGGTGCTTTATTGTTGACCCTAACTTCACATAGTACAGGTGG GGAGGGGGCATAACGTCAACGGTATCAGGACTTCACACGCCTCAGGAAGA AAAACGGTGCTATCGATGCCCCGTCAATAATGTCTTGAACACCTGGATAT CTGAAGCATACCTCGGGGATACTGCATTAATAGATCTCTATAAAATCACC GTTTCGTATGTGGTGGTCTTAGGGTAACTTTAAAAATTCTGAGGGTCGTC ATGATATAAGAGTCGGGTTCATTTATGGTGACCGTTATTTGTCGTTTCCA CCCAAACAGTTCAAATTGCAACCCAACTGAGTGCCATCAACGACAGCCTT TGGGGTATAATCTACGCCATCTTAGCCCTGACGGCGGTAGCCACAGTTGT GGTGATCGGCGGATGTTTCTGCCTGCTACAAGCCAGAAGGAAGCGACTGG ACGAGGAGAGTTACTACAGCCCGATCCCACAGCAACCTCCCCTTGCATTG CAAGTGGCACCGCCTGCACAAGAAAATGTGCGAGACCACCCAGAAGGAGG CAAGTTTTTTTTTCGCTAAATACTTATTGCAAGGGCAAGTGTCTTAGATG TCATCCTTGTCCCATTCCCAGTCTTACTGCTCCGTACGCGTCACCCCTCT TTGCTGCAGCCACGTAATCCTTACATAAGATTTTACACAATNATATAAGA GTCGGGTTCATTTATGGTGACCGTTATTTGTCGTTTCCACCCAAACAGTT CAAATTGCAACCCAACTGAGTGCCATCAACGACAGCCTTTGGGGTATAAT CTACGCCATCTTAGCCCTGACGGCGGTAGCCACAGTTGTGGTGATCGGCG GATGTTTCTGCCTGCTACAAGCCAGAAGGAAGCGACTGGACGAGGAGAGT TACTACAGCCCGATCCCACAGCAACCTCCCCTTGCATTGCAAGTGGCACC GCCTGCACGAGAAAATGTGCGAGACCACCCAGAAGGAGGCAAGTTTTTTT TTCGCTAAATACTTATTGCAAGGGCAAGTGTCTTAGATGTCATCCTTGTC CCATTCCCAGTCTTACTGCTCCGTACGCGTCACCCCACTTTGCTGCAGCC ACGTAATCCTTACATAAGATTTTACACAATATGAAAACACTGAAAAACGT CTGGCGAGATTGAACTAACGGCAAGGAAAATAGTGGTGAATATGATAGTC GTCTCGTTTTCTTTTCTGACTTCAAGTAAAACCATATCAATTAAATCCAG TTTGAATTCAAAAGCTACATATCTACAATGTAAAATGACAACACGAGAAC TAGATCTTTAATCAGATCATACATTAATCATATGGACATACTACCCCTAC GGCTACTCAGCTATGAGACTGATGTGTGGATATGGATACAGTACCTAATG ACTGTCCTATAACTAGTATGTATGTTGCATCTTTGCATCTCGCAGGAGAA GAATGGGCGTGGACCAACCCCTCCCTCCCCGTGCAGAACGCTAGTCGCTG CCCCTCCCACAGCCGCCTGAATGTGGAAGACGCCTTGAGGAACCAGCAAG CTCATGACGAGGGACGCAGGAGTTCCTCAGAGTCTGATGTCTAAGAAGGA AATAACAAAAAATATCTACGTTTTGCTGTGTATGAATGAATATGCGATCT GGCAGACTGTCCTTTGGCAAGACATTTGCGGTCATGTGTTGTGTTTATTT TGACATTAACGTTATATATGTGCGATTCATATCAAGTACAATAACGTTAT GACTTATGTATGTAGAATCCTTTGTACTCTTCAAATGAGAGATGTCTTAT TTCATGTATAAAAGATTTCGATTATGATAGGAATATATATATATATATAT ACCTATTGGCTACATTATGTCTACATTACGTATTTTCTTCAGAATGTTTC AATATTAAGGCGCTAGCATAATAAACTGTATCATTTGATGGGTAACTTTC CAGAAATGAAGATGTTCCTGTAAGTCGAATTGCTCTGTCCTTTTTTTAAG CATTTGGGGTTGTGAAAGAGAAGGTGTGTAAATAAAAGCTAACAAGTGGC ATACAACGCGTGTCATTGCACTTCAAAGATATTCGGCTAAACGTGAATGT CTTTCCTTACTACTCCTATACACGAACGGAAAAGTCATGTTGGTAAGTAG AGGAAAAACTGCAACCTATTAGAATAATGCTTTTCTTCAATCAATTAAGG ATCTGG

Coding sequence (CDS) from alignment at Sc0000086:1128939..1132694-

>Blg00358.2 ID=Blg00358.2|Name=Blg00358.2|organism=Branchiostoma lanceolatum|type=CDS|length=723bp|location=Sequence derived from alignment at Sc0000086:1128939..1132694- (Branchiostoma lanceolatum)
ATGGCGCGTTTTCTCGGTATGAGTCATTTCTCGATTGTCCTCTGTTGTGT
AGTTTTGGTCATTGTTGGGATTGTAGAGGGGACGAGCTCTTCAGAAGAAC
AAGCGGATAGAAGATGCGACGTGGACAAGTATTATGACGAGTTTACGAGG
AACTGCGAGGCTTGTAGCCTGTTGTGCGAGGTGGCACGGGATACCATGAA
AGAATGCGAGCAGAAGTGTGGAGACTACCTGGCCATTTTACAACGGCAGA
CGACAACACTCGTGTACAGGCTACGCCACGGTCATCACGGGGGTCAAGGT
CACGGCACAGGGGAAGCAGTCCGGGTCGACAACGTTCAAATTGCAACCCA
ACTGAGTGCCATCAACGACAGCCTTTGGGGTATAATCTACGCCATCTTAG
CCCTGACGGCGGTAGCCACAGTTGTGGTGATCGGCGGATGTTTCTGCCTG
CTACAAGCCAGAAGGAAGCGACTGGACGAGGAGAGTTACTACAGCCCGAT
CCCACAGCAACCTCCCCTTGCATTGCAAGTGGCACCGCCTGCACAAGAAA
ATGTGCGAGACCACCCAGAAGGAGGAGAAGAATGGGCGTGGACCAACCCC
TCCCTCCCCGTGCAGAACGCTAGTCGCTGCCCCTCCCACAGCCGCCTGAA
TGTGGAAGACGCCTTGAGGAACCAGCAAGCTCATGACGAGGGACGCAGGA
GTTCCTCAGAGTCTGATGTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00358.2Blg00358.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00358.2-exon-Sc0000086-1570713199:1132150..1132694Blg00358.2-exon-Sc0000086-1570713199:1132150..1132694Branchiostoma lanceolatumexon
Blg00358.2-exon-Sc0000086-1570713199:1131139..1131249Blg00358.2-exon-Sc0000086-1570713199:1131139..1131249Branchiostoma lanceolatumexon
Blg00358.2-exon-Sc0000086-1570713199:1130596..1130835Blg00358.2-exon-Sc0000086-1570713199:1130596..1130835Branchiostoma lanceolatumexon
Blg00358.2-exon-Sc0000086-1570713199:1128939..1129699Blg00358.2-exon-Sc0000086-1570713199:1128939..1129699Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:1128939..1132694 -
Properties
Property NameValue
GeneIDBlg00358