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Blg00357.0 (mRNA) - B. lanceolatum

Overview
NameBlg00357.0
Unique NameBlg00357.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:311055..315211+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00357.0 ID=Blg00357.0|Name=Blg00357.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4157bp|location=Sequence derived from alignment at Sc0000086:311055..315211+ (Branchiostoma lanceolatum)
ATGCCTTCAAAAAAGAAGAAATACAACGCGCGTTTCCCTCCCGTAAGTAG CGATAGATACGTTTTCTCTCCTTTCTGTAGATGGTGCATGTATCTCGTGC TTGTCCGTGTGTTTGTTTGTTGTACAAGGGAAAATCAGTGCATTTCTACT GGTGCTGTTTTGCAGGAAATGGTGTGGGGAGGGGGGCGTTTCTTATTCCT AGAACCATTTTTATTTTCAGGGCTTCGGGGTTCAACCCACGCATTTACAA GGAAGTGTTAACGCCATATGTTAGAAATGTACGCTTTGGTGGTGTTTGAA AGGAAATTCAACTGCCATAGTTGAATATGGTCACTCTTATATTTTCTTTC TATAAAATATCAGTATGTTCTGAGAACTAGAACATGACTTGTTGACTGAA TTCTCTGTAATTTTTAGCAAACTGTGTGTACGTGTAACTCCTATATCAGT GCTTTAGGATTTATGTTGTAGTTTGTACATAAAGAGTGTGACCATTACCA GAGACCCCAGTCCATTTGTAATCATAATAATATTGCAATGACTACACAAT CAAGTCACTGTTTATGGTAAATTATGATACTTGATAGTCATTAACAGTGA AACAATCACAAAGTGTGGTTTTGTTTTCTTTCCACTGTAGGCCAGAATAA AGAAGATTATGCAGACAGATGAGGATGTGGGGAAAGTGGCTGCTGCAGTT CCTGTCATTATCTGTATCCTTCTCAATGTTGTTGTAAAATGCTAATTGTT TTCCTACTATTCAAACATTGTTTTTCTTACATGTGTATTGTTAGTTGGTG TGTACTACCTGTAGAAGTGACAGACAAATTGACATGTGTATTGGAAGCTG CAAACGTGTGTATTAAAAGGGGCCCTAGTTAAAATATTCAGTACAAACAC CTAATAGCTGAAAAGTGTTAACACCAAAAAAGGCTATAGTGGTCTTTTGT GTTCAAAAAGTTGAAGTGTAAGTCAATGGTGAACCACCCACAAGCAGTTT GTGTCATGACTAGACAAAGGACAGACCTATAGTTTTGAATCAACAAAGGT TCAAACTTTAAGCAAACATCATTAACACAAATGGATGGATGCTAACCATT CAGACTTTTAACATTTTTTAAAGGAAGGTCAGAGTCTTGCCTACAATGTT GAACTTGAATGTGCATTTCCTCAGTTTGTATGATTCTAAAGTGTTCAGCA TAATCTTCAAATATAGCAGTTTATTATATGTCAAAGTGCATGTTCTTCTG TTCTTTAATGTGATACGTTATATTGATAACCTCTAGGCAATATTGTAGCC TGTTGATAACTCCTTGACCATATTATCAGCTCGCTGCTTGGAGATCTTTG TTGAGTCTCTTGTCACAAAAGCCAGTGATGTCACCAGGTCCAGGAATGCC AAGACGATGACAACTGCTCATCTGTAAGCTCCTCAACTTTCCTTTGTACA TATGTGTTTTGGTATCATAAACTCAAGAGTAGGGGGATGGGGAGGGAGTT GATACATAGATATACCCAGTACAAATACAACATTGATATAGAGCAGACAG GGCATTTGTTATTTAATGGTACTCTGAGAATTGTTTTAAAGGACTGTTTG CAAAGGGCTGCTCGTGTGAAGCACATATTTGTAAACTACTGTCCCAGGGA GAGAAAGACAAAGCTAAGCAACTAAACGCTCTGCTGCTATTTAGAATTTC TTTGTTATGAATGTAGGGCAAAAGTTGTGGCTGTGTTTTCATACAATAAA GGCTGGATGTATGCAAATTGTCATTCAATATGGGGCTTTTGTGGGATACT GTTAGTGTTATTCACAAGTATTGGTTACAATAGCCCTTGTGTAATGGTTT TGAGCAACTGCACAACAGACAAAATTGGTATCACCAAAAGAGTTCCAAAA CTATATTGTAGAAACACCTTAGTATCATGCAGGAGTTCATAAAGTACACT TTGTCAACTGCATAGGCACTGTACTGAAAGAAAAGTTTCTGATGAAAACA TTCCAATACAGGAAGATGTCCTTTTCTCAATTGAAACATAGCTCTTTATT GAATCAGTGGTGGTGTTATTAAGGATCTTGAGTGCTTACTTATTGTTTTA CTTTATAACTTACATAACCATAGGAAAAGGTGCATTGAAACGGAGAACCA GTTTGACTTCTTAAAGGATCTTGTAGAGAAGGTACCAGACGTGGGAGAGG ACGGCGGAGGTCGGGAGGTCAGGAACAGCAACGACAATGCTGCACAGTCT CGCCCCAGGTGAAGTTTGAAAACAATTCGGGTTTTAAACAAACAAGTGTC AAACAGGACCCATGTACAAATGTATCTACATTGTGATTGCTAGATAAGTG TGTATGTAGTGTAGGCATGTATGGTGACTCTAATGTTAACTAGTGTAGTA GTAGTCCACTGTTTTTTGCAATCAACTTCATGTATTGTGCGTATGTGTAT ATGGAATCTGTTCATTTAATCATTTTTGTCCTGTTTTTTTTTTCTAATTT CAATTTTTCAATTTCAATGTACAAATCACATAGATGATGAGTCTATTAGT TATAACAGGAGGCCTCTTATTGACTTTAGATTAAGAAAAAGATTAAGGAG ATGAGATATCATTGTCTATGGCTGTATGTAACTTTTCACTTACTGTTTTA TTGATTTTGAATGTCATTAATTCATTGCTTCAGACAAAGGAGGCCGAGGA CAAATGGAGGGAGGAAGAGAGGAAGAAGAAAATCATCAGAAGAAGAGGAG GAAGAGGAGGAGGAGCCAGAGGTAGGTTTGAAAGAAGTGTGTGACAGAAA TGACACCAAAATACAATTGTTCAATGTTTCCTGATCACATTTAATCACAA TAAGTAGAATTCAATGAACATAGACCTTTGTACAAAATACTAGTATACAT TATTGAATAGTGGATCTTACAAATCATACTTCATGTAAGTCTTGTTCTAG ATTCTGCCTCCAGGTAATCAATTGATTTCCTTCAATGAAGTTGCAGTGAA CATGGCAGCAAATTTGGAACTTGGCACTACAGCTCATGAAAAACAGTCTT TTGAAATGCATACATTACATACAGTTTAAAGATGTCATGATGTTTTCTTA GCTTGCGTCTCAAGAGACTGTTTTTCACAAGCTGCAAAATCTTTCCTCGT GTTTGAGAATGATTTCAAAACAACTGTGACATACTAGTATCATAGTCTAA AGCTTAAGGTGATACTTCTACAGGATGAGTCAGACATGGACATGGAGGAT GACCAGGACAGCACGTCACAGGACAGTCAGCCCCTGAACCTGTCCACTTC CTCAGCCACCCACCTGACTGTACCAGTCATGCCCAGCTACACACCCTCAA CATCCTCGGGACCACAGCAGAGACCACCCAAGCTGTAAGAACTACACCTC TTCATTTTTCTGGATACTGTGCTTCATTATAACACATTGGATATCTACCT TGCACAAATCTATTTTATTGCTTTTCGGACATTTTTAGTAAAAATATAGC AAGTGGACAACATGAAAATAGAGCTTGGAGGAAAACATGCATCTGACAAT TTTTATTACTTGAAATTTTCTGTACCAAGGTACAGACTTTCCCCTCAGAC TCTGTTTTGATCTTCCAGTTCAGCATTATTTTCATATATTTTAAAATCCA AGAAGAAAAAAATGAAATTCATGTGATCTTACCTTCACAAAAGTAAGAAA AGTCTAAAGAAAGAAAAGTCAAAATGTATCTTTGATGCCGCAGTACTTTT AGGCAGTATATACTAGTACACAAAATACTTTTTCTCCATGTACAGTATAT ATAAAACCAAATTTACCTGCATCACTCATTTTCTTCTAATTCCATCAAAA ATGAATCAGTTACAAATACAGTATGTCAATGTGTACGCCTGTTTTAAATC AAACGTTTTGGAAATACACTTTTCATGCATCTGACATAGATCCATAAGCT TGATCTAATTCACTCTATGTATTTGTCAGTGGACAGCCTGCAGTCTCCCC AACGCTGGATGTCCCTCCCGTGCCTGTCATCCCCATCCCCGTCCCCCAGA TGTTTGCAGAAATGACTCCTCCCACATCCATGTCAGTCACCCACATAGCC CCGCCCATCCCAGCTCCAACAGCCAATCACGATGAAGATGATGATTATGA CTCTTAG

Coding sequence (CDS) from alignment at Sc0000086:311055..315211+

>Blg00357.0 ID=Blg00357.0|Name=Blg00357.0|organism=Branchiostoma lanceolatum|type=CDS|length=771bp|location=Sequence derived from alignment at Sc0000086:311055..315211+ (Branchiostoma lanceolatum)
ATGCCTTCAAAAAAGAAGAAATACAACGCGCGTTTCCCTCCCGCCAGAAT
AAAGAAGATTATGCAGACAGATGAGGATGTGGGGAAAGTGGCTGCTGCAG
TTCCTGTCATTATCTCTCGCTGCTTGGAGATCTTTGTTGAGTCTCTTGTC
ACAAAAGCCAGTGATGTCACCAGGTCCAGGAATGCCAAGACGATGACAAC
TGCTCATCTGAAAAGGTGCATTGAAACGGAGAACCAGTTTGACTTCTTAA
AGGATCTTGTAGAGAAGGTACCAGACGTGGGAGAGGACGGCGGAGGTCGG
GAGGTCAGGAACAGCAACGACAATGCTGCACAGTCTCGCCCCAGACAAAG
GAGGCCGAGGACAAATGGAGGGAGGAAGAGAGGAAGAAGAAAATCATCAG
AAGAAGAGGAGGAAGAGGAGGAGGAGCCAGAGGATGAGTCAGACATGGAC
ATGGAGGATGACCAGGACAGCACGTCACAGGACAGTCAGCCCCTGAACCT
GTCCACTTCCTCAGCCACCCACCTGACTGTACCAGTCATGCCCAGCTACA
CACCCTCAACATCCTCGGGACCACAGCAGAGACCACCCAAGCTTGGACAG
CCTGCAGTCTCCCCAACGCTGGATGTCCCTCCCGTGCCTGTCATCCCCAT
CCCCGTCCCCCAGATGTTTGCAGAAATGACTCCTCCCACATCCATGTCAG
TCACCCACATAGCCCCGCCCATCCCAGCTCCAACAGCCAATCACGATGAA
GATGATGATTATGACTCTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00357.0-exon-Sc0000086-1570713199:311055..311096Blg00357.0-exon-Sc0000086-1570713199:311055..311096Branchiostoma lanceolatumexon
Blg00357.0-exon-Sc0000086-1570713199:311695..311767Blg00357.0-exon-Sc0000086-1570713199:311695..311767Branchiostoma lanceolatumexon
Blg00357.0-exon-Sc0000086-1570713199:312384..312477Blg00357.0-exon-Sc0000086-1570713199:312384..312477Branchiostoma lanceolatumexon
Blg00357.0-exon-Sc0000086-1570713199:313178..313312Blg00357.0-exon-Sc0000086-1570713199:313178..313312Branchiostoma lanceolatumexon
Blg00357.0-exon-Sc0000086-1570713199:313738..313825Blg00357.0-exon-Sc0000086-1570713199:313738..313825Branchiostoma lanceolatumexon
Blg00357.0-exon-Sc0000086-1570713199:314278..314438Blg00357.0-exon-Sc0000086-1570713199:314278..314438Branchiostoma lanceolatumexon
Blg00357.0-exon-Sc0000086-1570713199:315034..315211Blg00357.0-exon-Sc0000086-1570713199:315034..315211Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00357.0Blg00357.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:311055..315211 +
Properties
Property NameValue
GeneIDBlg00357