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Blg00356.0 (mRNA) - B. lanceolatum

Overview
NameBlg00356.0
Unique NameBlg00356.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:837801..844261+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00356.0 ID=Blg00356.0|Name=Blg00356.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6461bp|location=Sequence derived from alignment at Sc0000086:837801..844261+ (Branchiostoma lanceolatum)
ATGACCACCATACCACAATCTGCTGAAGACATCGCCCTCTCCTGGGTGCA GCAGGTACTGCAGAGAGACCTCCCTGGCGTCACCATCACGGACGTCGATG TGAAGGGATCCATCAATCAAGGTGAAGGATTCCTGAGCGACATCGTCGCT TTTGATGCTGTTGGGACCAGGAATGGTACCAGTCAGCGCTACAGCCTCGT TGCTAAACTGACCGATTTCAAGCGCCCGCAGACTGTAATGTCTGACTTTC CGAAAGATTTTCACATCGAAGTAGAAATCCTGGAGGTGAAGTTTTACTCC ATTTTGGTCCCCGATCTTCTTTATAATGTGTCGGTCCAAAGTACAGAGCA GAAATTCCAGCCCAAAGGTACAGATTTCGGTGATAACGCCCATGCCGATT CCTTGTTCCTCCCCAAATGCTACTACGCCGCCTCCGACCCAAGCTCCATG GTGTCCGTCAGGGTTATGGAGAACCTGAAAACTCAGGGGTTCTCAATCAA ACCCGACCTCCAACCACTGAGCCGTGAGGAGATGATGCTGACAGTCGGGG CCCTGGCGCAGCTGCACGGCCTGTCACATCGACTAGAGCTCCGTTTGGGC AAACCCCTTCCCGAGAAGTACGACTGGATTCGGCCAGATACCAATGAGCA AGCGATGGAAGCCTTCACCGACGAATTTCATAAGTGTTTGAAGAAATTCG CAGCGGCTTTCCCTGACCAAACAGACCTTGTTGCTCGTCTGGAGAAGCAA AACCTCAAGACTTTGTTTGATTACACGGGGGGCTCGAGGGTCAAGGTGCT CAGCCATTCAGATTGCTGGGTCAACAACATCATGATCAAGGTAGGTGTGA TTCATCCCTTCGTTTTGTCAAATTCGAATATACATAGTAGTGGACGTTGA ATTGAGAATTTCTTGTCAATAATTCTAGACTGTCGCTCAAGCTTCCAAGA GAATGTGACTACCAGAAATCTTAGCTGTAAGTTTCACCTTTAACCTTCAT CAGGAAGAATAACCGGCTAAAACGGTAGGAAAACGCACGGATACGTGACT TCAGTAATAGATCAAAGCTGTCAGAAAGCCTGCATTGACCCCGACTTTGT TGAGTTCTAATGTGTGCTGCCTTTTTTACACCCCTCGCAAATAGTACGAA GGTGACGTCCCCGTTGCAGCAAAACTGGTGGACTGGCAGGGGATCAAGTT CTTCCCACCGACCTATGACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTT GGGACGTGTTCTACAACCACAGGGACGTTATCTTGGCTCACTATCACCAG CAACTGCAGGAGACACTGGATCCTAGCGGTAAGAACCCGTCTTTGTCGGT ATTGAAATGTATCTAAATAGATNATGATCCTGCCTGCCGACCAGGATCTA CTGCGAATGGTCCAGGAGATCAAGGAGTGGGGAGTTCTGTAAACGGACCA ACTCTGGCCACGGGTGAATTTTATTGGTCCACATATGTACAAGCTACACT TAATCAAGTAGTGGGGAGTTCTCTAATTGGACCAACTATGGAAACTTATG AATTGTATTGGTCCAGTTATGTACAAGGTACAATTTTTAGCAACAGTTCG TTAGGACTCAAAATCAACTTATTAAGGTAACACTGCATTTATTAATGTAC GTATTTCGACATCATCTTGAATCTTAGTCTTTTATTAGAATAAGCTAACA CTTCATTTATTAATATACGTATTTCGATATCATCTTGAATCTTAGTCTTT TATTAATCTAACTTCGATAGCTTCTTGGCATGTGACAAGGCTATGAGTGG ATAAGTGAGATGACCAGTATATCTGATCATATTTGATTCATCATTAGTTA CTTAATTAGTTATTATTTGTCACTTTCTTTGTATCAGAGGAGAAATTCAT TGAACGTCAACATTAATCCAACCATTGCATGAAATAATGCTGGGTCACAC CAGTTATTTTGGATCTTGACAGACAATTAATGGAGTGACCAGTCAAAATG ACGCTGAGATAGACACCCATGCTACCTATGTATTTTTCAGGAACTTTCGT GCATGATGCACAATAACATGTTATCACAAAGTATGTTAAGCTGTTCAATA TATTTCAATAAAAACGAATTTCAGCTGTTATAGATATTTCAATAGGGTTG AACTACTAGTTTAAAACGTCAGATTTCTTACCCAGGGCAATTAATAAAGG AAATGCTCCTACTGTGACCTTTCCAGCAGTTTGAGGGGTGGATTGACCTC CATAACCACATGGATTCATAAAACTATTAGACTATCTGCCAGCCAAGAAC AATGGCAGGGACAGATACCATAATATCGGTTTAGAAAATTCAATTTTTTT TCTGTACTGGTTTTCTGTACTGGAATATTATCAAACCATGCAGAATGGCT CAGATATCGGTAGAAAATATCACATAGTCCAAGGAAATTTGACTAAGATA AGATCCCTTGGGTATTGAAGACAATACTATCTACAACTTTCAGTTTTGGA AAAATCAACATTAGCTTGTTCAAATTTTCAAACTTTCAAAACGGCCCTGT CAACGTTGTGTCAGAGTATCTAATTGTATCTAAATTTCCAACTGGAAAAT GTCTTCCCCACATTTAAGCTGAGGAGCTAGCATTCGAAAATCGTAAGCTA GTTACCTACATGTACATGTTCTTATGTTTAATATGTTTTCTCTGCCTTTT TCTGCCTGCAAAAAGCTTTGCAGTGGCCTGAGCGAATAAAGATGGGGGTC AGCTCTCTTCATCATCTGATCTCAGTGTATATTTGTGGGAAGGCAAATTA GGCCCATATTTTCATAACTGCTTTCTCCTAATGTTCTGCCTGCCATGAAT TGCGTACATTACATGCATTTAAGTCATATCATGGAAAACACTGGAATTAT AGAATTTCCTCATTGATTATGCAAATGAAGTCCTAATGTGCATACTTTGC CTCTCATAGTGTACATCTCTGTCCAAGCTACACTGTGCCTGCATGCCGAA TGTCATCATGGAAATCCGTCGTTCCCTTGGTCAGTTATCCTCTTTGAAAA TGTAGAAAAAGGGACCGGGATACCAAGCAATTGCAAGCAAGTTAGTAGGG GGCCCAAACAAACCACTTCTGTCTTACATCAAAAGCTGTCTGCCACCGAA ACATTTTAACGACTTCAGCCATGACAGAAGATCTTTGCACTGTAGGGACC GGCCAGACAGGAAACTGCCACTTGTTAATGAATTCAGTAAGGCCTTGTAG TTTCCAGCTGCCTTCTAAATTTCATGATCCCTGAACGTGCTTGCCATACT TAATCCGAAATAGCAGGAACTGGTTCAGCCCATTGACGAAGTGAAGTCAT TGACCTACCAGCACTGTTGACCGGCAGCGAGGAAACAGCTGGCGTACGTA TACTTCTTTATCATTAACTACAGGGTGGTTTCTATGAAGTCTTAAAGCAT ACTATATCAATTGTCTGTTTCAGTTCGTATTTATCCCTAATTAGTTCAGA CCCATGTAGCCTGGATAGAGAGTTAAGCACAGGCAGGGCCACAGCATATA CAACTTGTTCAACTTCGAATAGCATCGCTCACTCTTAGGTTTATCATTGG CACACGCTGATGGTTAATACTTTGGAATTACTTTAGGCAGATGAGCTGTT GCAATGTTTTAAAAACCACTCTACTGTCTAGTCTGTTGTGAACAAAATGT GTTGCTGCATACCATCACACTCGTCCTTCGGGAAGCCTATGTAACCAGGT TCAAGGGTCACGAGCCACGACCCTGAACAAGGCCCCGGANCCCGATCAAG GCCCCGGATGTTCACTTTCCAGTTGAGTGTGACAAGTCCCGACCAGTTGT TATAGCACGTAGTTAGAGCGTGCACGCTTAGCAAGAGGTAAGATTGTTTA CCTTGTAATACACCAACATATATATGCAGAGCCTGTATGTGGGTCCTGGT TATGCACGGGCTGGGGGTATAGCGATTATGAACTACTCAAACCTCTCAAG GCTGATCACATCCTATGCTGGGCAGATGCTAAATGCTCGGGCACAGTTGC AAACGGGCCTCGCCATGTAGTTTCTGTTATCTGCCTTTTAGAACGCTGTC TCTTGGCCATATGTGGCTGCAGGGCTACTTTGAGCCCCAAAGGGTTCCCC GGTTGATTTGGACTTAGAATCAGTCAGGGTCTCGGCGTAAAACATACAGT ACATGTCTGACCGGTCAGTTAAAACCAGACTGCACCCTATCGGACCCTTC AGCGGTCACTCTGGTACATTTGCCGAGGCATCTGACTGTTACCTGCCGGA TACCAATCCCTAAACGGCCCAAACCTTTCAAGAACAACAATAAAGAACGG TCCTGCATGGGAAGCTTGAAGGAACTTTACTTGTGACCACGTACGACAGA CATAAGCGCCGGGGACTAGACTGGCTACTGACCCCGTACTGGTCCCCTTG CAATTGTGGCCAGATCTGATAGGGCAACACAAACAGACAGATAGTGGGGT AAGCATATGTCATACATTTTGAGTTTGCATTTTCAGTTTTCGTCTTTCCT CCCTATTTAAAAGGAATATGGCAACATCAGACATGATCACCACCCCACAA TCTGCTGAAGACATCGCCCCCTCCTGGGTGCAGCAGGTACTGCAGAGGGA CCTCCCTGACGTCACCATCACGGACGTGGATGTGAAGGGATCCATCAGTC AAGGCGAAGGATTCCTGAGCGACATCGTCGCTTTTGATGCTGTGGGGACC AGGAATGGTACAAGTCAGCGCTACAGTCTCGTCGCTAAACTGACCGATTT CAAAGTGCCGCAGACTTTAATCCCTGACTTTCCGAAAGATTTTCACATCG AAGTAGATATCCTGGAGGTGAAGTTTTACTCTATTTTGGTCCCCGATCTT CTTTATAATGTGTCTGTCCAAAGTACAAAGCAGAAATTCCAGCCCAAAGG TACAGATTACGGTGATTACGCCCATGCTGATTCCTTGTTCCTCCCCAAAT GCTACTTCGCCGCCACCGACCCAAGCTCCATGGTGTCCGTCAGGGTTATG GAGAACCTAAAAACTCAGGGGTTCTCAATCAAACCCGACCACCAACCACT GAGTCGTGATGAGATTGTGCTGACAGTCGGGGCCCTGGCGCAGCTGCACG GCCTGTCACATCGACTAGAGCTCCGTTTGGGCAAATCCCTTCCCGAGAAG TACGACTGGATTCGGCCAGATACCATTTTCACAAATGAGCAAGCGATGAA AGCCTTCGCCAACGGATTTCAGAAGTGTGTGAAGAAATTTGCAGCGGCTT TCCCTGACCAAACAGACCTTGTTGCTCGTCTGGAGAAGCAAAATCTCCAG ACCTTGTTTGATGTCACGAGGGGGTCGAGGCTCAAGGTGCTCAGCCATGG AGATTGCTGGGTCAACAACATCATGATCAAGGTAGGTGTGATGCATACCT TCTTTTTGTTAAATTCGAATATACATAGTAGTGGACGTTGAATTGAGAAT TTCTTGTCAATAATTCTAGACTGTCACTCAAGCTCCAAGAGAATGTGACT ACCAGAAATCTTAGCTGTAAGTTTCACCTTTAGCCTTCATCAGGAAGAAT AACCGGCTAAAACGGTAGGAAAACGCACGGATACGTGACTTCAGTAATAG ATCAAAGCTGTCAGAAAGCCTGTATTGACCCCGACTTTGTTGAGTTCTAA TGTGTGCTGCCTTTTTCACACCCCTCACAAATAGTACGAAGGTGACGTCC CCGTTGCAGCAAAACTGGTGGACTGGCAGGGGATCAAGTTCCTCCCACCG ACCTATGACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTTGGGACGTGTT CTACAACCACAGGGACGTTATCTTGGCTCACTATCACCAGCAACTGCAGG AGACACTGGATCCTAGCGGTAAGAACCCGTCTTTGTCGGTATTGAAATGT ATCTANCTATGACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTTGGGACG TGTTCTACAACCACAGGGACGTTATCTTGGCTCACTATCACCAGCAACTG CAGGAGACACTGGATCCTAGCGGTAAGAACCCGTCTTTGTCGGTATTAAA ATGTATCTAAATAGATTACTAGTACTGTCCTCAGCTATTGCGAGAATACT GTCCCCATCGAAAGGAATGTACTATGGACACGTAAAACTTTCCCAAAATG TTCCAGGGCCTTGCCAAATTTCTTTTCTGATCTTGCACACTCAAGAATTG TATTTTCACGATTGAATTTATCAGATACACATGGCATCTTTCTCTAGAGT CGTCGGGCCTACAGAAGTACACACTGGAGCAGCTGAAGGAAGACTTCAAA GCCGACTGTCTGTACGGAATGTGCTGCCGCGTCATGGGGTTGATGATCCT GCCTGCCGACCAGGATCTACTGCGGATGGTCCAGGAGATCAAGGAGTGGG GAGTTCTGTAA

Coding sequence (CDS) from alignment at Sc0000086:837801..844261+

>Blg00356.0 ID=Blg00356.0|Name=Blg00356.0|organism=Branchiostoma lanceolatum|type=CDS|length=1188bp|location=Sequence derived from alignment at Sc0000086:837801..844261+ (Branchiostoma lanceolatum)
ATGACCACCATACCACAATCTGCTGAAGACATCGCCCTCTCCTGGGTGCA
GCAGGTACTGCAGAGAGACCTCCCTGGCGTCACCATCACGGACGTCGATG
TGAAGGGATCCATCAATCAAGGTGAAGGATTCCTGAGCGACATCGTCGCT
TTTGATGCTGTTGGGACCAGGAATGGTACCAGTCAGCGCTACAGCCTCGT
TGCTAAACTGACCGATTTCAAGCGCCCGCAGACTGTAATGTCTGACTTTC
CGAAAGATTTTCACATCGAAGTAGAAATCCTGGAGGTGAAGTTTTACTCC
ATTTTGGTCCCCGATCTTCTTTATAATGTGTCGGTCCAAAGTACAGAGCA
GAAATTCCAGCCCAAAGGTACAGATTTCGGTGATAACGCCCATGCCGATT
CCTTGTTCCTCCCCAAATGCTACTACGCCGCCTCCGACCCAAGCTCCATG
GTGTCCGTCAGGGTTATGGAGAACCTGAAAACTCAGGGGTTCTCAATCAA
ACCCGACCTCCAACCACTGAGCCGTGAGGAGATGATGCTGACAGTCGGGG
CCCTGGCGCAGCTGCACGGCCTGTCACATCGACTAGAGCTCCGTTTGGGC
AAACCCCTTCCCGAGAAGTACGACTGGATTCGGCCAGATACCAATGAGCA
AGCGATGGAAGCCTTCACCGACGAATTTCATAAGTGTTTGAAGAAATTCG
CAGCGGCTTTCCCTGACCAAACAGACCTTGTTGCTCGTCTGGAGAAGCAA
AACCTCAAGACTTTGTTTGATTACACGGGGGGCTCGAGGGTCAAGGTGCT
CAGCCATTCAGATTGCTGGGTCAACAACATCATGATCAAGTACGAAGGTG
ACGTCCCCGTTGCAGCAAAACTGGTGGACTGGCAGGGGATCAAGTTCTTC
CCACCGACCTATGACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTTGGGA
CGTGTTCTACAACCACAGGGACGTTATCTTGGCTCACTATCACCAGCAAC
TGCAGGAGACACTGGATCCTAGCGAGTCGTCGGGCCTACAGAAGTACACA
CTGGAGCAGCTGAAGGAAGACTTCAAAGCCGACTGTCTGTACGGAATGTG
CTGCCGCGTCATGGGGTTGATGATCCTGCCTGCCGACCAGGATCTACTGC
GGATGGTCCAGGAGATCAAGGAGTGGGGAGTTCTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00356.0Blg00356.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00356.0-exon-Sc0000086-1570713199:837801..838640Blg00356.0-exon-Sc0000086-1570713199:837801..838640Branchiostoma lanceolatumexon
Blg00356.0-exon-Sc0000086-1570713199:838945..839128Blg00356.0-exon-Sc0000086-1570713199:838945..839128Branchiostoma lanceolatumexon
Blg00356.0-exon-Sc0000086-1570713199:844098..844261Blg00356.0-exon-Sc0000086-1570713199:844098..844261Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:837801..844261 +
Properties
Property NameValue
GeneIDBlg00356