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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:378416..383639- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00355.2 ID=Blg00355.2|Name=Blg00355.2|organism=Branchiostoma lanceolatum|type=mRNA|length=5224bp|location=Sequence derived from alignment at Sc0000086:378416..383639- (Branchiostoma lanceolatum)
TCCAAGATGGCGGCGCCCATGAGGGTTGCAGCGCGAGCTATTTCATTATA
TAAAGGTAAGATATTTTTGGTCACAAATTGGTCGTATTCTTATATGAATA
CCTCGTTTTCTTTGTGTAACGATTTCTTGAGGTTTTAATGATTCATTAAT
ACTGCAGTTTGTTTTCCAAGACATAGGGGAAATGAACAAAATACCTGCCA
GTGTGCAAGGGTCACGGAGGGGGAGGGGGGCGTTTCAAGTCGAAGCCAAC
TTTACCCGTGTTTGTTTGATTAATAATCTCCGTGTACATGACATTATCAT
GTTTTGATTGTCAGCTAATCATTGCCTTTAAAGGCTAGTGGTATTATTAA
AATTTAGATGAGTTGTGCTTGTCACTTTTTTCATAACTTCATAACTTGCT
AGTACATGATATCATAATATCAATATGTCAGCATCTTTCCTCAATTTTAT
CTTACCCTTTAAAAATACTGTATAATAATGTCCTTGATAATACATGATAC
CAAACACATACAATATGGTTATCTTATCCACAATTGTAGTAAGTATCATA
AGCTCTTTCACAGATCTGACTGTGCATGTTTAGATCAGAGGTGAAGGTCC
CAAAGATATGAACGAAACACATTTGGAGATTCTTTTGCAATCCGACAGAA
CAAGGCCATATATCCTAAGACATGTGTAAAACATGGTCGAGACAAGAACT
GTTTACAAGTCAGGGGACTTCACCTTAGACCAGCACATGCACAGTTGGAT
CTGTGAAAGAGCTTATATAGAAAGACTACAGGTATATCGTGTATGCATGT
ATTCATGTATACCATGTTGTATTTCAGATGTATCTATAGTGAGGAGTGTG
TCAGTCATCCCCTCTGTATCAGGGAAGGTACTGATGACATCACAGATGAA
CCAACCAACCAGCATCCAGCCCTGCAGACATGTCAGCTTCATCAATAAGT
GTAGGTGTTATACTGGTGTAACTCTCTTAATTTCATTTCATTTTATTCCT
TTGTTTTACCAGAAGAATCACACACTTAGGTCCCTTGACCTGCTCTTCAG
GTGTCCCTGGTTACATACATATACATTACATAATCATTTGAACATTGATG
ACCATGAAAATCAATAAAAAGAGTTGTTAGAATAGTTTTGTTACCTATTA
CTCAGTCTATAGACATCTTTTTTTTAATGTTCATACAGACTGTCAAAATG
TAAGACTTCTGACAACATGCATTTCAACATAAAAAGAAAACAAGAATTAC
ATTTCAGATGATATAAAAACAACCTGGCAGTTTCAATGTTTCATCGTAGT
CCAGGTCAGTTGATTATAACACATGTGCCAAATTTTGTACAGTACACACG
GACGGCCATACATGTTTGTTTTGCTATATGCTGGTTACTTACATGTATTT
TCTTGTCTGTCCAACACAGTAACTGCTGACCAGCTGTGGAAAGGTGTTTT
AGCTGAAGGTTCGGGAGCTCTGAGACGAGCTAGAGGCAAGAGAACCAAGA
AGAGGACCAAGAGAGACCTCAACATTGGCCAGATCATCGGTGAAGGTGTG
TAGATTTTGTGGCAATCAACATTTATAAACGTGTTTGCATGCAACTGTTA
TCGTAATTTAAGGGTTCCAGTCCTTTGCAAGTGATGTTAAACTGTTGATG
CCTAGCTTGAGGAGAGCTACACCTCAAGAAAGTTAAAGAACCCATCATAG
GTATTGACAAGAGTAGGTGTATATGTTAATCATATGAATCTCCTTTTTTC
ACACAGCTTGATCAGAGTTCACACGATGTGTTATATATTAAGGCTGTTTA
TTGGTTATGCAAACAAAGAAACATGTAAAAATGCAAATTGGAAGTACAGT
CAAACCTGCCTAGGCGACCACCTTTTCAACGCGACCACCTGGCCATGGCG
ACCGCTTTTTCTCGGTCCCGAAAATTTTCCCCATAGGCACAAGCATTAAG
CTGCCTGCCCAAGGCGACCACCCGTCCAACGCGACCGCGACTGCCACGAA
TTGGGACCGCACAGAGCACAATCCCTGCTCATGGCGACCACATTTTTCCG
GCGTGTGGTGACATCGAATTTTGCTGTTGGATTTCGCTGAAATTTTTTTA
AGACCTTGACGGACAAAAATATATCAAAAGCATTGATTCCTCCATGAAGT
GTTTTAATGAAACGTTCCCACTATAAACATTATAAATACAAAGGATTGTG
AATACAACTTGGATATCGATGTTGTTGTGCCCATCGTCATCTTATAGTTT
ACCGCAAGCTTGGTTCGGTTTGAACTCAATTTTCAAAACGATCACGTAGT
GCATGGCGTCAAAAAGTCAGATTTCACAGAAATTACTTTCTATTTCTTGT
ATTTTCAACAAAAATGTGTCTCTGTCTTACTAAATTCTGCCGGAAAATGA
CGTTGGCCGAGACATGTTGTTTCTTGGTCCGCGACGCCATCTTGTTTCAG
CGCAGCATAACGCTGACTTTTCTAAAACACGACGCTTCTGTGTATGAATA
TTTAGAATACTCTCCTAATCGATGAAAATTAATATTCTTATATTCTTGTT
ATTTCCATGACTCTCACAAACCTTTATTGGGCGCTGCTTGCTTGTAATCG
CCGACGCTGTGCGTTCTGCTGCACTGTTACCTTTCGATGCGGTCGCGTGC
TCGGCGGCGGTATCACAACTTTCCGTTTTCATCCTTCAGTTGTCAGATCG
AAAACTTTTTGCCGCTTTAATCCAGCGGTCGGCTCCCAAAAGAAGGCTGG
GATTTTCTAGGGATTTGGCTCAGGCCTTAAAACCAAGATTTTATACGCGC
GTGTGTGTGTGTACTCTAACTTTAACGTAACGTGTGAATGTGGGAGGACG
CTGCAAGGTCATCGAGGCAGACATTGTTTTTAGTCAAAATTACGACGAAC
ATTTGTTCACGATGTAACGGTATACAAATATTACAATGATAACAGAAAAT
GCAATTTCTGTAGGATCTTTCTGTCAATGAGAACTGAACCTGCACTGGTG
GGGGTCATGCTGTCTAAAATCACATAATTTTCCATCCATCTACGTGGTAC
ACGGTATTTGAACACCTCGAGCTGGAAACATGTTATGATAGGAATCCTCT
TCATGGCGACCACCTGTCCATCACGACCGTTTTTGCTCGGTCCCCCGGGT
GGTCGCCTTGGGCAGGTTTGACTGTACAATCAAGCAGTTGCAATATTGAA
GTTTTTCTGAGCACTGTAACGTTTCATCTTTTAGGAAAAGACGCGTACGT
GTGGCCAGGTCTGAACGCTCCGGTGATGACGGCCGGAATGGTCCACGGGA
TCCAGAAGAAGGACAACGACCCCGAGAGAGAGAAGAAGCTGATCGAGGAG
AGAGATGCGTGGTACAAGATGAAGTCCAAGCGGTTGAAGAGGCAGCGAGG
ATGGACCGGTGGAACATTAGGGGGCACCAGCCTGGGGTCACCTGATCCTA
TTGGCAACAGTAAGAACGAATATCGTATACATTTGTATAATTGCTTGGGC
TGTCTTTTTCCTTTTTGTGACACTCTTTTAGGTTTAAAGAGGGTCGACTT
GACCATGTCTTTCTTAATTTACAGGAACTTTTGAAGACTTTGAAGCAAGG
GTATTAGAGGTAAGCATCTATATAATAACACACATGGCAGTGCTTGAGCT
ATCTAATACCTTTACCAAACAAGATGTCAATAGGATTGTTTTTTATTTGA
TGGAACTGTCATGTTGCCATACTTAACTAACACATTGTTTTGTTGTCTGA
TTTTTTATCTTGTATCTTCCGTTACTGTTTGACTGTTAGAAAAATCACTG
TTTGGCCAGCATTTCCAAGTTTAAGTTAAGTATATGTGTATCTACATGAA
CATCTAGAATTCATGTACATTAAAGGGTGAACTGGTAGAAACGTATCAGC
ATGTTAGAACTAAAAGTATAACGTCTGTGAGATGCAGTCTAAAGGTAACA
AAAAACAAATTCGCAAACAATAATAAGTTACTTTTCCAGATGCAGCCCTA
GGATTTGTAAATCATGTCTACTTGTGGATACTTGAGTTGATGGTATATTG
CGTTGTTGTACAATACAGATGCGTAACGTGTTCAACATGACAGCTAACAT
GGGCAGGAAGAGGTCTGTCCGAGCCCTGGTGGTGGTGGGCAACAGGAAGG
GAGCTGCAGGTGAGATGGGAACTTGTACTTACATATTAGCAAGCTCTTAG
TGATATCAGTTTTTATATAGGCACATTTTTACATTCAAAAACTGCTTTCG
CTATAGAATTGTTTTAATACTCAGTACTTGAATAAGTCAGCATTTCGGAA
ATACTTTTTAAGTAATCTGACGTGGGTACATAAATGTCCAACTTATGCTT
ATATTGTTGTTGTTTCTCTTTATCTGGTAGGATTTGCCGTTGGAAAAGCT
CTAGATGCCAGAACAGCTCTGAAAAAGGTAAGAGGCAATGACATCATGAC
ATGACTCTTTGGATATCTAAGGTAAGCTAATGAAAGCAAGACATGATGTT
TTTACTACATTTGCTTATTGTCACATGACGTGTTCATATACTCATGATAT
GGCAGATAAGGCTATAAGCATACAACAATGATATGCGTGAACCACCCAGA
TGACTTGATAAATTTGATATCTTATCAAAGATCTACTTTGTTAACAGGCA
AAGAACAAGGCAGTGAATGTGCTGTACTACATTGAGAGGTACAATAACCA
TACAAGTAAGTTTTCACCTCCATCTTGTCTCTTATAACACAGGCCGTGTA
CATGTACTAGTACCTACAGCATTGTACAACTTGATAGGGAGTTGTGATTC
CCTTTGATTTAAGCTTGTTGGACCTTTTGAAAGTCATCATAGTACCTGTG
GTATTAGGCTCCTGGCAACTTAGTAAAACCTATGCAATTACGTCAGCATT
TTGTCTGTGATGTATTTCTGATTTCTATGAGTTCTTCTGATGCCATCCTC
TACTTTCCAGTCTACCATGACATTGACGTGACCTTCCAGAACACCAGAAT
CAAAATGAGGAAGCAAAACAGAGGTGGGTTGTAATCTTCATTCTTGTGTG
TTCTATTCAGTGTAATTCTCTTATCTTTTACAATGTCACCATTATGATTG
GAACAGTTTGAAAACCTCTGTGATAGTAAATAAATTGAAACAAAGTCAAA
ATACATTATTTGCTTTAGATGGAAATCATCATAACTTTAGTATGTTTCAT
ATCCCACATGTTGTTGTGATCATG Coding sequence (CDS) from alignment at Sc0000086:378416..383639- >Blg00355.2 ID=Blg00355.2|Name=Blg00355.2|organism=Branchiostoma lanceolatum|type=CDS|length=828bp|location=Sequence derived from alignment at Sc0000086:378416..383639- (Branchiostoma lanceolatum)
ATGGCGGCGCCCATGAGGGTTGCAGCGCGAGCTATTTCATTATATAAAGA
TGTATCTATAGTGAGGAGTGTGTCAGTCATCCCCTCTGTATCAGGGAAGG
TACTGATGACATCACAGATGAACCAACCAACCAGCATCCAGCCCTGCAGA
CATGTCAGCTTCATCAATAAGTTAACTGCTGACCAGCTGTGGAAAGGTGT
TTTAGCTGAAGGTTCGGGAGCTCTGAGACGAGCTAGAGGCAAGAGAACCA
AGAAGAGGACCAAGAGAGACCTCAACATTGGCCAGATCATCGGTGAAGGA
AAAGACGCGTACGTGTGGCCAGGTCTGAACGCTCCGGTGATGACGGCCGG
AATGGTCCACGGGATCCAGAAGAAGGACAACGACCCCGAGAGAGAGAAGA
AGCTGATCGAGGAGAGAGATGCGTGGTACAAGATGAAGTCCAAGCGGTTG
AAGAGGCAGCGAGGATGGACCGGTGGAACATTAGGGGGCACCAGCCTGGG
GTCACCTGATCCTATTGGCAACAGAACTTTTGAAGACTTTGAAGCAAGGG
TATTAGAGATGCGTAACGTGTTCAACATGACAGCTAACATGGGCAGGAAG
AGGTCTGTCCGAGCCCTGGTGGTGGTGGGCAACAGGAAGGGAGCTGCAGG
ATTTGCCGTTGGAAAAGCTCTAGATGCCAGAACAGCTCTGAAAAAGGCAA
AGAACAAGGCAGTGAATGTGCTGTACTACATTGAGAGGTACAATAACCAT
ACAATCTACCATGACATTGACGTGACCTTCCAGAACACCAGAATCAAAAT
GAGGAAGCAAAACAGAGGTGGGTTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00355.2-exon-Sc0000086-1570713199:383585..383639 | Blg00355.2-exon-Sc0000086-1570713199:383585..383639 | Branchiostoma lanceolatum | exon |
| Blg00355.2-exon-Sc0000086-1570713199:382690..382812 | Blg00355.2-exon-Sc0000086-1570713199:382690..382812 | Branchiostoma lanceolatum | exon |
| Blg00355.2-exon-Sc0000086-1570713199:382095..382220 | Blg00355.2-exon-Sc0000086-1570713199:382095..382220 | Branchiostoma lanceolatum | exon |
| Blg00355.2-exon-Sc0000086-1570713199:380181..380405 | Blg00355.2-exon-Sc0000086-1570713199:380181..380405 | Branchiostoma lanceolatum | exon |
| Blg00355.2-exon-Sc0000086-1570713199:380031..380065 | Blg00355.2-exon-Sc0000086-1570713199:380031..380065 | Branchiostoma lanceolatum | exon |
| Blg00355.2-exon-Sc0000086-1570713199:379481..379571 | Blg00355.2-exon-Sc0000086-1570713199:379481..379571 | Branchiostoma lanceolatum | exon |
| Blg00355.2-exon-Sc0000086-1570713199:379213..379259 | Blg00355.2-exon-Sc0000086-1570713199:379213..379259 | Branchiostoma lanceolatum | exon |
| Blg00355.2-exon-Sc0000086-1570713199:378935..378992 | Blg00355.2-exon-Sc0000086-1570713199:378935..378992 | Branchiostoma lanceolatum | exon |
| Blg00355.2-exon-Sc0000086-1570713199:378416..378679 | Blg00355.2-exon-Sc0000086-1570713199:378416..378679 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:378416..383639 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00355 |
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