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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:571294..579160+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00354.3 ID=Blg00354.3|Name=Blg00354.3|organism=Branchiostoma lanceolatum|type=mRNA|length=7867bp|location=Sequence derived from alignment at Sc0000086:571294..579160+ (Branchiostoma lanceolatum)
GGAAGAAGCAAGATATGTCTTTGCTATGGATGCTTAGCCAGAACTAGAGG
GAAGCGGTTAGAAGGTATTTATTATACCAGAATTGTCACAAAAATGTACT
GCACATTTTTTCTATATAAAAAGAGTGCAGCAAGCTTCAGGTCAACAAAG
TTAGTGTTTTAATGGCCTACTGCGTTTGATGTGAGAAAAAAAGGATTTGA
GACATTTTCTACTATTCACACAGTGCACGTTTGGACTACTTATCACAGTA
TCTATTGGTATCTGTACAATCAAGCAGACACAATGTATACATCCGCATAG
TACGACATATCCGCAAACAGCTGACATGTTCCTGATATTGTATTCGTTTA
AAATCCTGCAGGACGTGTCAGTGATATCATATATCATCTAGTCACCTACT
ATATCCCCGTACCTTGTTCTACATGTTATAACTGTCAAGATAGAATATCT
ATGGAGCAAGTCCCTTAGATGTACCCAACTTAATTATAACATGAAGTGCT
TCTCGATGGCCTTTTAAAGTAGACACGAGTTGCGCGAGTCTTCACCATTC
ATTTAGCCTCAAAATACGGGCTTGCTTAGCTGAAGTCTGCCTTTGAACAT
ATCACTGGACGGCCAAGATAGAAAGAAAAGAAAAGATTTGGGCCTTTACA
GCTATTACAGTCGCGTGATTATAGATTGAAGCCCTATAAAGCTTATTTCG
AGTCTATCATTCCTTCACATTTTTACAGCACTGTTATATTCGTTGTATAC
ATGTGCGATTTTACGGACAACTTCAGCGTGGCTATGACAGTACCGACCGT
CGACCGCAACGACCTACGGCAACATTTGACGTCACAAAACAGTACGAATT
GTGTATACATGTACGACACATTCGCGACTGGCCCAAGAACGGAATTGATA
GGTCGTAAACCTATCGCAGGATGAATGTGACCTGGGCCCTTATATTGAGA
TCACAGTGAGCTGGTATCAACCGCTCCACTGAATAGCTCTTGATACTGTA
AATACATTTAAACGTTCGCGTGGTTTTTATTTCACGGTAGGGAGAAAATG
GAGTGTTCGCGGTGGGTTTAAGTTCGCGTTCGAAACAAAGGTAGCGCTAC
AGCCATGGGTGGGTAAAAAGTTTGGCGATGGTTTAAGTTCGAGCTGAAGA
GTTCGCCGCGAAAACAACGAACATAAAACCACCGCGAACATGTCTTCATT
TACAGTATATATAAGCCCCCATTTAAGATCGTTTTTTTGGGGGGAGAGGT
CAATTTTAGATATATGCTACCATCTTCTTTTATATTGATTTCTTATTCAT
TCCGGATGTATCGCTTCAGGGGCTCAATATTTTTGGTGCAACAGATATAT
TCTTGCCTTACATGTATCTATGAAAAAATTGAAATGTCATTGAATGACAA
TAACTGTAGTCTATTAACCCCGCCAACAACATCGTAGTGTTTAAATCAGA
TTTTGACTCAGACTGCAAAGTAACTCGTCAGAGTTGGGTGACTTCGAAAG
TATCGTACAATGATCTCTATTGTGTATTATTAACATTTCAAAGAGACATG
TAGATATTCATATCACGTCTTATTACATAGAGTGTGACAACTAAACACTT
GCCTTGACAAGTACGTATAAACGAGCAGCAGAATGACCAATGTATATATT
TCCAGTGGACACGACAGTGTCGACATACGCCAAGTGGCCACTAGTATATA
TGATAAACACCGTCTAAAACAAGCCCCTTTCAGTAGCTAGCGCTTTTGCC
TTCAATGATATTCCTCGGCTGTCTTGCCCTTGGAACTTTGCCTTTGTGTC
AACAAACGCGTCCCAAAGTCAACGCATATATCCCTCGTGACACGCCAGTA
TTTGATTTGAATGCTATCATAAGACCTCTGCTGCCATATTAGGCCCGCAT
ACGTCAATGCAATACCTCAGATTTCTAATTCCAGCGGCTCCGGACGGACG
GAACCATTCCAGTATCCCAGGAGGGGTTCTTGATACTTGTTTTGACGTAA
CAAACGCCGACATGCTGTTTCTCTGTGATATTGTAGCCCGGTTTGGACTA
AAATAGCTAGGTTTGGCTATTCTTGTTTAGCGTCGGCTTGCACATCTCAT
AACGTCGGTCATAGAAGAAGAAGAAGAACTTTATTGCGCGACAATTGTAG
CTGGTACAATGACAACTTACGTGCATGATAATTAAGCTATTGCTAATTGT
TGACAGATATAGAGAACTAATCTAATCTATGACTAACAGTAAAATAGTCT
ATAAAATAATGTACATGCTAACGCTCTAGAATACAATATGTAATAATAAT
GTTGATAACAGTATGCTGTGTCAGGAATGTATGATATTGTCTCGTTTTTG
CACAGAGTTATATACAATGATATATATGATGACCTGATATCACGTGAATA
TATGTGTTTTCAAATGTGCCACATGCAGCGAAAGATGCATCTGCATAGTA
TTGAAGAAAAGGGCGATCGTGTGTGTAATACGGTTTATGATAGGCTTCAG
GTGCCTTTAATTCTGTATGCGTAGATTGGCAATAGCTGCACACACGTGAA
ATCTTGTTGTTCCGTTGGGTAGAGCCGGAGAGTGGGCGATGCCACCATTG
GGGGTTTGGCAGTTTTTGTAAGCCGTTATTGGCCGTTATAATCTTATGTG
CATTATAAAGCGTAATTTTTAGACGGCTGGATTCATCGTACCTAATAACG
CTCTAATCCGAAATAGGGACAAATCGAATTTTTAACATAATGCGCTATGA
GCGCCGAGAATTTTGCATATTTCGAACTGCACTACCGACTACCCCCATGC
AGACCCCCTACAATTGACTCTACCCGAGAGGTCGACTGTCAAGCCGGAGG
AGAGCCGAGCCGGATGTTTAAGGATCTCTAACCCGGTAGTGCAGATAACT
GAGACGGGGGCTCAGAAAGGACTACATCGTTCAACAGTTCTCAACAGCGG
TAGGTGGGAGTTTTATAGTTCGTGACTTTCGTAGTAGATCATAGGTAGGT
TGTAGCAAGGAGATTAATATCAACCAACCTCCTTGGTTGCTGAAAATTTG
GAATTACCAGCACTAACGTTATAGTGTCCATCCATGTAAACAATAAAAGA
TGTTAAACGTCGCCCTAACATAAACACGGGAGGCTGACGTTTCTGTAAAA
TCGGATCACTTCGCTATGCATGAAAACTAAAAGCACCACTTGGTTTGTTG
TCTGTTTGTCCATTTGCATGCATGTCGGGTACAATCGCCTGTATGCATGA
CTGGTACAGGCATTAGTAGTCTACACCAGACTACTAGCTGTAGAGTTGCT
GAAAAATACACTGAGTAGCAAGTGGCCAAGAAGGGTGAGTAATTTTTCGG
ACTGAAGAGTTGCTAAGGTGGACCTCTGTGTCCTGCTAACTCTTCTGACA
AATAAGTCACCATATTTTGCCAATGTCTCCTATTTTGTTGTAAAGCTAAG
GAGTCTCGAGGAGACTATGTATTGATTTGTGCTAACTGAGCTGGACTGTT
TCTATCGTGTAACACTGTAGCACTGAACAAGGCACGATCCTCTGGTTGCG
CTCAAGAATCATTTTCGCTGAGTATAGTCGACAGGTTATGCGTTGGCATG
GCTTGCAACGGTAGAAAAGTTAATGTACGCCACGGCTCTTTCAAAGACTA
TCATGACAGTCAATATAGTAACCTATACACACACAATAAGCTAGTGACAC
CGTTTTCTTTTTTCAACGAGTTTTAAGCGTAACTTAAATATAAGTCTACA
GAGTACAAATGTACAATACATATACGTGCACTGCATTACACTGCAGACTG
GTCACGGTAGCCTACGTAGCAGACTCCTCGGTGGGCATTTCAACATGGCC
GTCTGCCGCTGATGGTGCACTGTTTTCTTATTGCTAGCTAGTTCCTTATG
CTCCTGTTTTCCGCTTTTCCGCTTGGAATAATTAGAAGGCAGTCAGATTA
CAATCAGATAAACAAAACAAAAACTGCAATGCTTTTTGAGAGGAAGCTTG
ACCAAAGTAAGTAAAATGCCAGTCCAGGAGCCTGCTATGGAGGCTACACC
ACGTCAGGTGTTTCTGATCGCGTGATTATGGTATCCCGGGCCCGCCTATT
GAAAAGACTTATGTCTTGTTGACTTTATCGACTATGTACATTGGTCGACA
CGCTATGCAAATACGGATGTATGCAGACCGTAGTAAGAATGCAAAAGAGG
ACTTTAGAAAACCACGCTATTAAAACGTCAAAAACGGCTGGTTGAATTCT
AGAATTGATTACAAGAGGGATAAAAGATGTCACTTGCAGGTGACGTCTCT
AGGGTCAGAAGTTTAAAGCTGTACGTGGTGAAATACGATACGTTTCTTTT
ATTGGGTCCCGGGCAAAACATTTACACAGGGAAGGTCGTTTGTCGTTGTA
CATCGCATGAAAGCAGGTTCATGTCGGAATTCGAAGGTAGGTATGGTTTA
ACTTTCCGGGTTACCAAAATATTGAAGGGGTGTCTGCAAAACTGTAGAAT
TACGTATGGTTGTCACTTCACACGTATTTACGTGCTGTGCGTGTAAAGGG
TAGGTGCGTGTGTGGGGAGGGGGGCGCGGACGATCACGTTCATAGCCGGA
CCTTGGACCGCACACCTGCGTGATCTTCACGTGAAGGCGAGTTCCCGTTA
GAGGGTCGGTCGATATTGCCACACCGACAGACGTCTGTTCAGTCTGACAG
TTTAGTGGGACTAACGTTATATTCTAAGTGCTGGTACTGAATATTCCCTT
CAGTTAAACGGTTCGCTGGTTACGTTTTGTTTGTAACGGACGGTAACGGA
AAAGGTAGGTGATTTGCAAGTTGTCGTTTTTCCCAACACCTTTAGCGATT
GGTGATTTACTAGAAGGTAATCTTATGTGTGTTAAGCATATCACTTGAAA
CGAGAGGTGACCAAAAATTGTTACCTAGTACCAAGGAGGTTATAGTATGA
CTATAATCACTATACCCTCCTTGCTAGTACATATGTCAGGTGTGTTACTT
AGTATTGTAGATTGCATGTATAGCTTTATCTTACCACAGTGGTCTGGCCT
ATCATTGGAATGTCGTACTTAAAGCGACAAATATACCCTTTAGATACAGC
TGTTCAATTCGTTATTTCTGTTTAAAAGTGTTTTTTTTTTCAAGTCACAC
CATGCGTTAAGTAAAAAAATACTAGATGGGTGATGATTTGAACCGTCAAA
AAACTAGGTTTCTATCCGTCAAGCGACGCCGCAAATGAACTACAACTACC
TGTAACGTTACATGTACTAAATCGACTCAAGCATACCATGCGTCACAATG
TCACTAGTACTGGTACAACGGCTGAGTGCTGAAAGATTAGTCTCTGTATG
AAGGCAGAACCCTCGTTGTTGATGGCCCTCCCTTGATCTCCAAGCAGATG
TTGGGAGGGAAGATCGTAGTAACGTTTTCTGACCGCCTACTGTAAAATAA
AACGGAGCAGCTATCAAACGTTACAAGTCGTCTCTCTCAACATCTGCTTG
GAGATATAACCCTCAAAGGCCGTTCAGTGAGAGGGTCATGGTTAATGATT
ATAGTAGTTAGGCCCTTTGTAGCCGCTAGTACTAGTAGCCGCTAGCTGCA
ATCTTTTCGATTGCTATCGGGTCATCGGTTACTTCGGGAGATGGTACTAA
GGTAAGGCCATTTCAGGACTCTACGTGAAACTTGTGAGTACCGCCAGTGG
CGTGAAGTCGGAAGCGGCTGAAAAATGACACCGTCTGGTAACAGGTTGTC
GTCTGGTAACAGGTGACAAACACAGAGGGGTTATCTTTCTTTCAACAAAT
GATGATCCGTGCAATACTAGTATTTGCAGATTATTTCGCACGATTTAACA
CAGAGGTTAATCGATAATTGTTGTTTATATTTCATCTGTAGGTTTTCTCC
AGGAACCATAATCATGTATTTCTGGCAACAGTGGAAGATTCTGTCCCAGT
TGCAGAGGCTGCCACGTCAGCGGCTGGTGCAGCTGACGGAAGTGCTGCAG
GGCAAGGCGATGGGCGTGACGGAGCCAGCAGCCGCCACCGCCGCCGCGCA
ACATCTGCGACGCCGCCCCGACGCCAGCATGCAGGCCCAGACGGAGGGAC
TAGGCCAAGAGGACACCATGCTAGGGCTGAAACAGGCCCAACCGACGGTA
TCCAGTCATCACCGGCGGGACTTCGACTCCAGCATGCAGGTACACGCCGA
CGGACTGGGCCATCACGACACGATGTTCGCGGCTCACGCCAGGGCCATGT
CCACCGTGTCTGAGCAGCAAGTACCGAGCGTGAGGAAAACCAACGGCAAC
GGGAACGAGAGGAAGGGTCGCGCCCAGGTGATCGAGCAGCTACTGTCTCC
AGATGCCCCGCAGGACGTCTTGAAGCGGGCCACCGACAGACTCAACCAGC
AGGAGAAGATGCACCTGAGACAACTTGTCATGAAGGCGATGGCTTGATGG
AATGATGCGTGTAACGTGGAGTCGTTGAAAACTGAGAACAGAGANGATGC
GATATGCGTGTAACGTGAAGTCGTTGAAAAAGAACAGAGAGACTTTAGAA
GTAACATTTGTAGAGACTAATCTTAAAGCATTTTCATTCAACGATTACGT
GTATCTTGAAGAGTGCCTCTTGTACAATTATTGTATTCATTACTTCTGGA
ACTATCACAAACTTATCGTGTGTGAAAAAGCAATAGCAGTTTTATGTTAG
GTGAAAATGTTTCTATCAGCTCATCAAAGAGTTACGTCACTGCTACAGGT
GTGCACATCAAAGAGCCGCACAGGGCAACATGTGTCCTGTGCGTCCTGTG
CACATCAGCCAGCCTGACGCCAGGTGGCGCTACTGCGCGCGACAGAATCC
ACACCTGCGGCATCTTGTCACACATGTTGCCCTGTGCGGCTCTTTGATGT
GCACACCTGTAGCGGTGACGTAAGTCTTTGAAGAGCTGATAGAAACATTT
TCACCTAACATAAAACTGCTATTGTTCAGCTTTTGGTATGTTCCCTATAA
GTAGTCAAAACCTATTGCCTGAAAAAGTTACCAAGCAGCAAGGTCTACAA
CAAAATAAACGTGTAATATATAACATTTTTCTCCTTCTTACCAGTTAATT
GTAAATAGTGTGGCAGTGTTGTTGCTCACAAAAAGTTCCATCTGAAAGAC
TTTCATAATTTGGTCTTACCCTGGTTGAATTGGAACCAACATTGTAAGCA
TATATGTTGATTTTACATATACTTTTTTGTCAGCAAAAATTGTGTGGAAC
TCCTTGCAACTTTAGAGCTATTTTTGTTGATATAGGTTTACCCTGAATTG
TTAAGTGAATACAAGTATTTTCCATTGTTTCAATATACATGTATATGTCA
TCCCTGAAATTTACTTCTCTTATTCTCAGTGCTATGAATTGTGACTTTCA
GAGTCTTACAGGCGGTCATAGATCTTTGTGGTTAGAGTTACAAAGATGTA
GTATGAACTGCAGAAAACATGTCAAAAGTAGGTAATTCTTGTCATAGAAG
AAGCTTTTTTAAAAAATGTATTAATGATTTCTCTCTGTCTGTATGAATGT
ACATAATAAATACAAGCATATGTTTTGTAAGTGTAATTGTATTACTTGTG
GAGAGAGAAAAGGCAACAGACTTTGGTTATTCTGCTAGAATATTAGAGCA
CGTTTTTTTTACCAAATAGCCCAGTGGGAAAAGTGCATGCTATACATTTG
GGAGGTTGCAGGCTCAACCCCTAGCTGTGTCATTCATACCAAAGATGTTT
ATAGTGATACATACTGCTTTAACTGCTTAGCACTCAGCAAGAGTAGGGGA
GTTAAACACACACACCCCTACCAGTGGACTAGTCTCCTACTGTAGTGCTT
GCATAACTGTGTGACCC Coding sequence (CDS) from alignment at Sc0000086:571294..579160+ >Blg00354.3 ID=Blg00354.3|Name=Blg00354.3|organism=Branchiostoma lanceolatum|type=CDS|length=534bp|location=Sequence derived from alignment at Sc0000086:571294..579160+ (Branchiostoma lanceolatum)
ATGTATTTCTGGCAACAGTGGAAGATTCTGTCCCAGTTGCAGAGGCTGCC
ACGTCAGCGGCTGGTGCAGCTGACGGAAGTGCTGCAGGGCAAGGCGATGG
GCGTGACGGAGCCAGCAGCCGCCACCGCCGCCGCGCAACATCTGCGACGC
CGCCCCGACGCCAGCATGCAGGCCCAGACGGAGGGACTAGGCCAAGAGGA
CACCATGCTAGGGCTGAAACAGGCCCAACCGACGGTATCCAGTCATCACC
GGCGGGACTTCGACTCCAGCATGCAGGTACACGCCGACGGACTGGGCCAT
CACGACACGATGTTCGCGGCTCACGCCAGGGCCATGTCCACCGTGTCTGA
GCAGCAAGTACCGAGCGTGAGGAAAACCAACGGCAACGGGAACGAGAGGA
AGGGTCGCGCCCAGGTGATCGAGCAGCTACTGTCTCCAGATGCCCCGCAG
GACGTCTTGAAGCGGGCCACCGACAGACTCAACCAGCAGGAGAAGATGCA
CCTGAGACAACTTGTCATGAAGGCGATGGCTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00354.3-exon-Sc0000086-1570713199:571294..571357 | Blg00354.3-exon-Sc0000086-1570713199:571294..571357 | Branchiostoma lanceolatum | exon |
| Blg00354.3-exon-Sc0000086-1570713199:574096..574242 | Blg00354.3-exon-Sc0000086-1570713199:574096..574242 | Branchiostoma lanceolatum | exon |
| Blg00354.3-exon-Sc0000086-1570713199:577185..579160 | Blg00354.3-exon-Sc0000086-1570713199:577185..579160 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:571294..579160 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00354 |
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