Blg00352.4 (mRNA) - B. lanceolatum

Overview
NameBlg00352.4
Unique NameBlg00352.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:563860..567742-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00352.4 ID=Blg00352.4|Name=Blg00352.4|organism=Branchiostoma lanceolatum|type=mRNA|length=3883bp|location=Sequence derived from alignment at Sc0000086:563860..567742- (Branchiostoma lanceolatum)
GAACTAGAGACTGACATACAAATCAACATTTGAACCAGGAAGTTGGCAGC TACTTTCATGGTAAAACAGGAAATGATACCGTGTTTTCATAGCTAAGAAG TGTGTTTCATTTTCTATTCATGTTTATATTTCTGATAAAACTAGATTTGA AACACGAATTTTTAAAGATCATTTTGTTGAGTTACATAGGGAATACAAAG CACATCGCACGCTACCCCATCGTCTTGGTATCAAGACCAAAAATACATTT GTGTGATTGTTTTACTTATGGTCATTGTTTTGGATAATGACGCCATTTCG TCTGTCATAGACGTCACATAAATGATTGCTCCAGAGCAGAGTTTGTTGGC ACTGTGGCAATGTATTTGTCGCGAATTTGCAGATGAAGTCAACAAAATCC TCGCGGATGAGAGAAGTGGCGGACCTGCGGTGGCCATGCAGCGGCTGTTG GCGGTACTGCAGGAGTGTAGACAGCCCGGCTGGTTTCAGGCTCTTCTGGA CGCCCTTGAAAATTCACGTGGGAATGAGAATTTCAACGTATCTTTGTATT ATCGCACTATTGCAAGAATTTTTAAAGCATAATGGGGAATTCATGAAAAA TACGCATACTTACACATACACACGCACACACACGCGCACACACACACATA AGCTGAACACACACAAACACATGCATGCACATGTATTAGACAATTTCCTC ACAAAGTCCTACTTTGTATAATTTGTATTTAATTGTACACGTATTATCTT TATAGAAACCAATACCTCCGCTGGCAAAGGTAGATGCTTCATGCCACGCA ACGCACCGCTACTTAACACAAATGTTTTTTCATCGTTTATTTGTACCCCA GATTTCACTTGTGTACGAAATGCTAGTCTCCAACCAGACCCAATAGATTG CAAAGACCGTATCCAACTGGAAGAAGGAGCTTGTAATGCAATCTAAGGGT TGCGAAACGTACTTCCTCTGCCAGTTTGATACGGTCTTTATGCAACCTGG AGATTACGAAATGCACTGATACAGGGTATGAGCACATCCGGGACATCATC AAGGGACGACAGACTGGCTGCGACATGACGTTTTTCAGGCGCCTCCTAGC GGTTTGCGCGCCTAACCTGCAGCGGATCGTGGCGGTGGACATGCTGCCGC ATCTCTGTTGTCTTACTGACGACGATAAAGTGGGTCTTCATACACAAACT AGCACTACATCTAGAGTTTCGAGATCATAAGGAGTAGAGACTTTGTAATG ATAAACGCCAATCTGTAGAGGGTGAACCTGTTTTAATCGTCGATTCTTAG AATTAGGATGTAACGTTACCCTTTTCCAACAGAATGTTCAACACAGTTTT TAAAACTTTGCTTCAAATTCTTTTGTGTCACAAAGTACTTTTGAACTATG TACTATGTTACCTACCAACACAGGTGAACTTACATCCTAAGATATTGTCA AGTAATCTCCCTGATTTCTCACGTAACCTGTAAACATGTGTAAACAGTGC GTACTCTACTGAAAATCATTTTGTTCCATGCTAGCGTTTTATTTGGATAT ATATACATTTCATTCACCCCGGCCTCCTCCTGCAGGTTCTGGTTCAAAAC GAGGCTCGTAACCATGGTAACTCCCGCGCTGTGGTGACCCTGCTGGACCG CCTGTCCCGCCGTGAACCCGGCTGGTTCCAACAGTTTCTCTCCGGACTCA GGCAGACCGGCTTTGGCGACATCGCAGAACAACTAGACGATCTGAGTTCA GGTAAGTCTGAATTTCTTCTCATGAGTTTGACTTTTGCCCAGAAATATTT TAGTCATTCGAGGTACGCATAGCACACTGCACACGTACAATGAGGCTGTT ACAATACAACACATTTTTATTGGAAATATTGAATTATACAAAACACACAG ACACACTCTGTCAATGACATTCTCTTGCTCTCGCTCTCACGCACTCCAAA AATGTTTTACTGTTTTCGTCACATTGATACTCTGGACTGGAGTTTAATAT GTCTGTACATTGGATAAAGTAATGCAAAGCGCTTTATATATACAGCATCC TTTAAAGGTAAGTTAAATGGATAATAAACTGTACTGTATTTAAGTGTTAC GTTCTTCTCCCAGTTCCAGAAGCAGTTTCATCTGTAGAAACATCGAGATC GTTTGCAGAAGTTAGCGGGACCGTTACGGGCGGAGCGGAACTAACGGATG CCGAAGGCGGCTACCAGTCGTCACCCGTTCGCCCTGTTTCCTTGGATTTA CGACGGGAGACTGAGGAAAACACCACCCACCGACGACAAGGTGTTCAAAT CTATAGCTAAGATTCACCAGTCGATACCGTTAGATTCGACTTGAGATGAA ATTGAAAGCAGACTTTTTCCTTTAAAGTTCCTTTATTCAGATACATCAAC GTACAGAAAACGACATACATGGATATTAACAAGGAACATGACAAACAAAT GTACATATGCTGCCAAAATTAGTACAGCAGTTTGCACATACAAAGCAGAA GTTATTGTCTTGCTGATAAGATAGACATATCATAACAATGGCGTAATTTT GAAGATGTCTTTGATTATACTGTCCAATATATGGCACTTTAAAGACATTT ATCACTGGTTATGAGATCTAGAAAAGAAGTACAAAAGAAAATTCTGGTTT AAAGCTTAAAATATTGACGTTATAAGGACTCTGTTTAATGTATCTTCATT TGGCAACAGTACCCGTACACGAGCCAGAACCGAGTTCCCCTAGTTCCCCG GAGGACGCTGCTCCATGGAAAGCGGCGCTGAGTGACCTGGCGTCACAGCT CTTCGGCCAGGTGGGACTGGGAGGCACTGTCGGGCAGGTGATGGCATCGA ATAGCACACAATATCTAGTTCATGAGTTAAAACAACATATTTCTGATGTT ATGGTTGAACATGTCATATGTGTTGTAAAAATGTTCTTCTTATATTTAGA GTATGAATCGAGTGCCGTGATTCTAAATCTTGCCGCACATTACATTTATT ACCAAAACACACAAACTATGACCATTAAAGACTCAATTTTATTCTTCTTT TGTGACCATTTAGACGTGAAAATTCCTATTTGCATTCATGCTTTACAAAT GAAATCAGCAACTGCAAGCACCATACAAATCCTTGCCATCCTTGGCGAGT AGTACAGCCTCCTGGCTCCCGGGAGTCGAACCTGCGCCGAACCCGGGCCG CCAGTCCATAAACCAAACGCACTTACCTCTAGGCTAAAAGGTTCGGACCA GATAGCCTGGTCAGTTTACGTTGGTGGCGTTTGAACTCCACTGTTACATT ACTGTTGTCCAACATAGCTCTGTTGTGAGTTCTGTACTAATCATGCACGT TAGATATCACTTCCACTGTACATGTACTAACTTATATGAAGGTTACATCG ACATCATCTTCTTCCAATAATGCAGGTTTGTGTGTTTGGCCGTACCATTC ACTACAGTACAAGAGGGGCGTTCAGCCGTGGCTTGAAATGGAAGTTCTAT GGCGAAGCACGGGATCAAGACAGCGGCCGTTCGTTTCAAGATCCGGAAGG ATGGAAGAACCAATCCACAGCAATAAGGAGGGCAGCGGGAGGCGTCTTGA AGATTCTGATGGCTGAAGGAATAATAGAATACAGAGAGATTAACGAGGAA GACTTAGACTGACAAGCTTTTTTGATTCATCACTGTTGAACGTTTAGAAA GGGCTATCGAAAAGGTTCGATGAGAAAATCTTGAAAATTCAATACATCGT TGATATTTGTGTACATGTACTCCACTTTTTTCTGTAGTAGATTTAGATAA CGCAAAATGGCTAAGCTTAAGATGTAAACCTATAACGTGACCGGCCCCGA GTTCGCCCCTTTTTTGTAATAAATAATAGTTTT

Coding sequence (CDS) from alignment at Sc0000086:563860..567742-

>Blg00352.4 ID=Blg00352.4|Name=Blg00352.4|organism=Branchiostoma lanceolatum|type=CDS|length=1059bp|location=Sequence derived from alignment at Sc0000086:563860..567742- (Branchiostoma lanceolatum)
ATGATTGCTCCAGAGCAGAGTTTGTTGGCACTGTGGCAATGTATTTGTCG
CGAATTTGCAGATGAAGTCAACAAAATCCTCGCGGATGAGAGAAGTGGCG
GACCTGCGGTGGCCATGCAGCGGCTGTTGGCGGTACTGCAGGAGTGTAGA
CAGCCCGGCTGGTTTCAGGCTCTTCTGGACGCCCTTGAAAATTCACGGTA
TGAGCACATCCGGGACATCATCAAGGGACGACAGACTGGCTGCGACATGA
CGTTTTTCAGGCGCCTCCTAGCGGTTTGCGCGCCTAACCTGCAGCGGATC
GTGGCGGTGGACATGCTGCCGCATCTCTGTTGTCTTACTGACGACGATAA
AGTTCTGGTTCAAAACGAGGCTCGTAACCATGGTAACTCCCGCGCTGTGG
TGACCCTGCTGGACCGCCTGTCCCGCCGTGAACCCGGCTGGTTCCAACAG
TTTCTCTCCGGACTCAGGCAGACCGGCTTTGGCGACATCGCAGAACAACT
AGACGATCTGAGTTCAGTTCCAGAAGCAGTTTCATCTGTAGAAACATCGA
GATCGTTTGCAGAAGTTAGCGGGACCGTTACGGGCGGAGCGGAACTAACG
GATGCCGAAGGCGGCTACCAGTCGTCACCCGTTCGCCCTGTTTCCTTGGA
TTTACGACGGGAGACTGAGGAAAACACCACCCACCGACGACAAGTACCCG
TACACGAGCCAGAACCGAGTTCCCCTAGTTCCCCGGAGGACGCTGCTCCA
TGGAAAGCGGCGCTGAGTGACCTGGCGTCACAGCTCTTCGGCCAGGTGGG
ACTGGGAGGCACTGTCGGGCAGGTTTGTGTGTTTGGCCGTACCATTCACT
ACAGTACAAGAGGGGCGTTCAGCCGTGGCTTGAAATGGAAGTTCTATGGC
GAAGCACGGGATCAAGACAGCGGCCGTTCGTTTCAAGATCCGGAAGGATG
GAAGAACCAATCCACAGCAATAAGGAGGGCAGCGGGAGGCGTCTTGAAGA
TTCTGATGGCTGAAGGAATAATAGAATACAGAGAGATTAACGAGGAAGAC
TTAGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00352.4Blg00352.4-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00352.4-exon-Sc0000086-1570713199:567226..567742Blg00352.4-exon-Sc0000086-1570713199:567226..567742Branchiostoma lanceolatumexon
Blg00352.4-exon-Sc0000086-1570713199:566564..566718Blg00352.4-exon-Sc0000086-1570713199:566564..566718Branchiostoma lanceolatumexon
Blg00352.4-exon-Sc0000086-1570713199:565992..566157Blg00352.4-exon-Sc0000086-1570713199:565992..566157Branchiostoma lanceolatumexon
Blg00352.4-exon-Sc0000086-1570713199:565453..565629Blg00352.4-exon-Sc0000086-1570713199:565453..565629Branchiostoma lanceolatumexon
Blg00352.4-exon-Sc0000086-1570713199:564906..565033Blg00352.4-exon-Sc0000086-1570713199:564906..565033Branchiostoma lanceolatumexon
Blg00352.4-exon-Sc0000086-1570713199:563860..564317Blg00352.4-exon-Sc0000086-1570713199:563860..564317Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:563860..567742 -
Properties
Property NameValue
GeneIDBlg00352