Blg00345.0 (mRNA) - B. lanceolatum

Overview
NameBlg00345.0
Unique NameBlg00345.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:146280..149613+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00345.0 ID=Blg00345.0|Name=Blg00345.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3334bp|location=Sequence derived from alignment at Sc0000086:146280..149613+ (Branchiostoma lanceolatum)
ATGGAGGATATTAGCAACGGTGAGTATCAATAGTCCAGGCGGAGGTTTAT GATCTTCAAATAGCTTTATGGATGATTGATAGCCGTTTGTACTGTTACTC TGTTTCTGAAGACAGGGAAAACAATACTAATTTCTCATAGATACAGATAT TCAGAGCTAATATTGTCGTGCTGATAAGAAAATGGATTTATAGGGGTCAA TACCAGGTCATTACAGGTGCAGTTGGACCGCAGGTCGCTGCGCAAACAAA ATGAGCGCTGCAAGCCATAGGCAACATTTCCCATTTTGAGTGATGCACTG TTCATACTGTTCATACGTTCCCATAGTACATATGTACATTTTTTGCGTCC AGTCATGCCACAAAGAACCCTAACTTAGAGGTCCAGGCATATCAAGAAGT CGTAGAATACTAATCTTGCATCATGCCAAACCCTTTTGACTGTAGTAGTG AGTAGTACTAGCGTAGATCAATAATCTTGTCAAAGATGTGTGAATTTACT TTCGTTTGCGTTATCGGGATTTTTTATGGCAAATCTGATGCAAATACATG GTCAAAAGTCTATTTTTTGTTAATGTTCACGGTTCCTAAACCTGCAACCC TCTACAACATTACACAGTTGTCTGGATTTAGTCACAGACAATACCAACGA CATGCCAGGTTTCCCTCACGTGGCTGATCATGTACCTGGGCACAGTTTTG CCGCGCTCACTCTGCACTTGTGCATGTCCCATCGGCGTGATCAGGACGAT TCCATTTTCATTGAGATGTGCGAGGGCGGGCAGGATGTGTAATTTAGAAA TATCAAAAAGAAGGCGGAGGTGTAACTATAATTACAGTAACACATAAGAT AGAAACACCATATTGATCTTGGAGGAATTTAGAAGGAAGAGAAAAGGAAA CTTTTCTAAACTTGAGCAACGCTTTGTAGTGGTATGATCTATATCGTCAT GAATCATCTGATCTGGCTATCATGTGACCGTAGCTTTAAAAAGGGTGGAA TTTTCGAGATTGTTTAATCTACACCCCTCGCGAACAAAATGCAGTCAGCT ATCATTGCCTTTTCCCTGTGTTCCGTGATTGTTGCATGGGCAGTCGGACA AGTCCAGGCTGTATATACAGGTATTACTGGCACCTTTAACGTTTCTCTTT GTATTTGTTCTAAGACTTTTCCATTTTGTCTTTCTCTGAGTCTTACTTAT TTGATTCAATCACGTGAAAGTCGGCTCTTTGTTATATGTTAGTACGAAGC ACATGACTGTAACGCGACACGACGGAAATGAAGGTGTTTGGTAGTGAATA CAGGTAACCATTTCAGGGTTGACGTCTTTTGTCTGGCTTTGTGTGATCAC ATTACGTTAGCCCCCACCAGACTTGTCTAGTAGCTAGCCAAATACATTGG ACAAGAACAAGACAAATCTTTCACCCAATTCTGACCAATTGCTACAATTC TTTCGGTCGTGACTGGAGTACTGGACTAATATAACCCACAAGCAGATATT GGGAAAGGTTCGTCACTCCCAACAATTAAAGTGCCTTGAGCGTTTTAGAA TTAGACCACACTAACGTACATTTTCTTTTATGTTCAGCTTTGGGAACGAG ATCGGTCAACGACGTCGTTTTGACTCAAGTACTAGCTGTAGATGCCAACC TCACCGTTCCTGTCGGCAGTACGGCGACGTTTGGATTCAAGTACGTGCAT CCTGAACCCGAAAAAGAGGAGTATGTATGGAAGACCATCTTTTCTCTGCA AGAGGGGCGTAACAACTTCTGTGAAACGGCAAATCAGATTACTGTGTGCC ACGGAAAGTTTCGAGATAGAGCTGTCATCGAGGACAATGAAGAAGAAGGG TTACTTACCCTGACCCTGCCTGACGTTCAGCGGTCAGATGAAGGTTGGTA CGAAGCAGAGGTCAGGGTGAAGTTCCATCCTCATGGAACCCCTGCCAACG TCAAAACGTTCCTACGTGTTACAGGTGAGATCTCTTCATAGTTTCGTTTT ATGGTGGGTACGTGATGATGGAAGCAAGACATTGAAGCGTTACTGCCAAT AGTAAAAAAATTAGACATGCTTGTGGCGACTCTTTTTGGGGCTATGTAAG GACAGACAATTTAATGTGAGGTTTTGCATATTTGACACAGAGATACCGTG CATGGAATCTGAATTGCACGTGCGCATTATTCTATTCATTTTTTTCAATT AGCGTTTATTTTTTACCTTGTGTTTACGTAACATACTACCGTTCCTGCTT TGCTCTCCAGTGTCTTATTCCTGAAAAAAAGTGATGCATGGAAAAAAACT ATTATTTCAGACGCACCAACATGTCGTGCCCTGATATGCCCGGGCAGTAA CATGTTTATCTGCAGAATGGAAACCAGAGGTAATCTACCAACCTGTACGT GTGAATGTGCCGACGGGACGGAGAAGACGACAAGTAAAACATTTTGATTA TATCCTACATGTCTAACAGTAGTCAAGCAATGTTGAAATGTTAGATTCTG AACCTGATATCATACCGAACAATAAACACATCTTGTGTGTGTGTGTGTAC GTGTGTTTGTATGTGTGCCTGTGTGTGTGTGCGCGCGCGTGTGGTGTGTG TGTGTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGTGTG TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAC CTGGATAGAGGCAAAGGCGAGAGACACGTGCGATTCATTGCGTCGTCCAT AATTTTCAAGGTGGACTCTGAGTGTTGTGTGCACGTGATGTTGTGCTGTG TTGTGATGTGATGTATTGGATATTGCAGCATGTATTTTGTTTTATACACC ACAGGCTGGGGCACTACAGTCTTTGGGTTTATAGTTCTGGGGATGACTCT TGTTGGACTCCCTCTTTGCATACTACTCCCTGTGGTGATCAGCAAAGGCT GGGTGGTCATAAACAGGTCAGTTTTGATGACTTACCGAAGCGTTTGATTA CCCTTGCAAATGTTGTATGCTTAACATATCGATGTGTAGCAATGTCTGTG GTGATAGGTACTTCGGTGAAGAAACAATTGTTATTGTTTGACCATTGTAT ACATCACCATATCTCCCTCTATGTACTGTAGTAGGCGCGTCAACATAAAC ATCCGTAAGTCTCGACACAACAATTCAATTGTGCCAAAAAAAGATAGAGC GGTGATAGAAGAAATCACACTTGCTTTTATTAGTATGAAGAGAATTTTTG TTTAACTTTGCAGGCCACAAGGCATTGGATGCGATGCTGTACTGTTCCCT AGATGTCCGACATGCCAAGGGGCACGCAGTGTAA

Coding sequence (CDS) from alignment at Sc0000086:146280..149613+

>Blg00345.0 ID=Blg00345.0|Name=Blg00345.0|organism=Branchiostoma lanceolatum|type=CDS|length=477bp|location=Sequence derived from alignment at Sc0000086:146280..149613+ (Branchiostoma lanceolatum)
ATGGAGGATATTAGCAACGCTTTGGGAACGAGATCGGTCAACGACGTCGT
TTTGACTCAAGTACTAGCTGTAGATGCCAACCTCACCGTTCCTGTCGGCA
GTACGGCGACGTTTGGATTCAAGTACGTGCATCCTGAACCCGAAAAAGAG
GAGTATGTATGGAAGACCATCTTTTCTCTGCAAGAGGGGCGTAACAACTT
CTGTGAAACGGCAAATCAGATTACTGTGTGCCACGGAAAGTTTCGAGATA
GAGCTGTCATCGAGGACAATGAAGAAGAAGGGTTACTTACCCTGACCCTG
CCTGACGTTCAGCGGTCAGATGAAGGTTGGTACGAAGCAGAGGTCAGGGT
GAAGTTCCATCCTCATGGAACCCCTGCCAACGTCAAAACGTTCCTACGTG
TTACAGGCCACAAGGCATTGGATGCGATGCTGTACTGTTCCCTAGATGTC
CGACATGCCAAGGGGCACGCAGTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00345.0Blg00345.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00345.0-exon-Sc0000086-1570713199:146280..146298Blg00345.0-exon-Sc0000086-1570713199:146280..146298Branchiostoma lanceolatumexon
Blg00345.0-exon-Sc0000086-1570713199:147867..148253Blg00345.0-exon-Sc0000086-1570713199:147867..148253Branchiostoma lanceolatumexon
Blg00345.0-exon-Sc0000086-1570713199:149543..149613Blg00345.0-exon-Sc0000086-1570713199:149543..149613Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:146280..149613 +
Properties
Property NameValue
GeneIDBlg00345