Blg00341.0 (mRNA) - B. lanceolatum

Overview
NameBlg00341.0
Unique NameBlg00341.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:21704..25524+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00341.0 ID=Blg00341.0|Name=Blg00341.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3821bp|location=Sequence derived from alignment at Sc0000086:21704..25524+ (Branchiostoma lanceolatum)
GCTGTAATGAGCTAAGCACAATTTGACAGAATGGCAAAGGAATGCATTAA AGCGACTTTGTAGTAGACCAGCACTCAGATGTATAAGAGAGTGACGCTGC ATTCTTATGACCGTGAGGAGTAAGGGGAATGACCTGGTAAGAGGGGAATG ACCTCATGGGGGAACTTACATGACGTCATGTCATTTCGCGTAGTGTCTAG CGAGTCAGTAAATCGAGACGCCTGTTTATTCTAGATTTCAACACACTATG ACGGTTTCTGGCTTTTCATGGTGGTTCTGTGAGAGTCTATATGTCCTGGC ATCATTGTACTATCCGGCACCAGGTAGGTCCAATGTTCCAAATGACTAGA AATGCAAGTACTGTCCCATACCTGGTATCATGGGCTAAAGAATACCAGTC TCTCAGGACATGTTTGCACACATACCTTGAAGAGTGTGCCCTGTCGGATT TTCTGATGTGTTTGACATGTGTGTCTGTGTCTGTGTGTGTGTCTGTGTCT GCGTTTGCGTTTGTTTGTGTTTGAGTGTGTTTGAGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGTGAATGTGTGTTG CGTGTGTGCATGTGCGTCACGATCGGAGGGAGTATATGAATGTGTGTGTG AGCGTGTGTGTATGCGTCACTTTTTTATGTATCGGTTCAAGACATTAAAG TAAGTATGAAAAATAGTCCCACGTATCAAGTTACATGTTGACATTTTCTG ACTGTGAATGCATAGAGGTGATGCAAAAGGGGGTTTTCTTTTGCAATGGG GCATTCCATTGCAGTCATTTAACATAGGCGCATGCGTATATAAATGCTCC ACTAATTTGGCGGGGTTGACGATCAAATGATGATATATATACATGTATGT ACTTGTATTTCTAGGACGTTAACATTTGGTATGTGTTGCCTTAGCATCTA GTGACCTTTGAGTTTGAAGGTTATCGAGTGCCTGTTTGTTCCTACATATG AGTTTGACATTCTGTTGTAGGAAATGTGAGAAAATGTCCCAAGGCGGTCA GGAGGTCTTCTTAGACAGGCCAATCTGTAACATATGTTGTCTACATGGAA AGGTTACCCAGAGATTTGGCCCAAAGTGCTGCACTCGAAGGGACTTTTAG AAGGAATTAAGGTGCAATAACATCCACACAAAAGGGTCGATATGAGAGGG ACCAATACACCGGCATTGCATAGGAAAAACATATATCTTCGATCGTGTTC CATCCCCGCGACAGAAATTCATGTACCCATCCCCCTTGTCTCCAAGAGAT TGAGATTCTTTACAAATTAATACAAAAGGAAACACGCCGGTTTCTGACAC TAACTGGAGCTAACTAGAGTGGAGCGGAACAGGTGTGACAGGAAATGACT CACTGGTCCGTTTTACCTTGCAAATGCCGCTACACAAACGATAAGCTGCG ACCGGCAACTTCAGATCGCCTTTCGTCCCAAAATGACATTTTCTGTCGCT TCTCATGGCTGGATTCGCCAGATTCTGGTTGGTCTAGTAGTTTGTTATTC GATTGCAGGTGAGACACTATTTATTACGGACTTAAATGTGATGGAGATTG AAGGTTTTTTCCTTCACAAAGCATTCTCAGTGGAGGCGTGTCGTGCCTTC TTCTGCCATGTAGGTTTTTGGGATAGTCGAGACATGTTTTATTTTCTAGG TTGGTATGATTGACAACAAAATGTACGAAGAAATGCTAAGTTTTCTCAAA ACGTATGGCCGGGAATGTTGTGAAATGTTTTAGCAGCGCGGGATTTCATA AACGTGACGCAGCAGAAATTTTCATGTTGTTTGTAGGAGATCACGTAGTC GCTCTCCAAACATCTAGCGATCACAGGAACGCATTTGTTCCTGTAACATT ACCAAATCACGGTGGTATGTGTGTGTGNACGGCGCCGAGGACTTCATCCA GCGCGCCGAGATATCTGAGACCTGGTCTCCGGTATCGCAGGGAGGACACA CCCAACACGGGAAGCTCATGTTTCAGCTGAACAACGTCAGTATGGGTGAT GCAGGCTACTACGAGGGGGAACTGAAAACCGAATACCACATCAACAACGT CAACGCCAGGTTGATTGTGAAAGGTATGCCTGTTTCATGTCGGGCACATT TCTACTCCTAGATTCTACTTATTAAGTTATATCTATAGCTACCTCCCCAG GCAAAGCTTTCCTTGTTGAGTGATTGAAACGCCAGAAAAGAGAATATCAA TACAAACACAGCGTATTTTTGTTTCCCCAGCGTGCCCCCATGAACCGGAA GGAGGGGACACAGACACTGTGCAGGCAAAGACAGGTATTATGATGCTATG TATTGTATGTAACCGAGAAATATGTCCACATTATAGTTTAACTACATGTC ATCTCATTAACTCAATATGTAAAATCCAATACTGATATCTCAAAAAATGA TTATTGACAAATTTCCATTCATTTACTCAGTAACTCTAATTAAAGCTTCA ATTATGTCTTTCTGAATAGCACACACTTAGAAATTCAACAATGTCCATTG AAGTGTTAAAACTCTCTCCTTATGAAAACGAGAGTGGACAGCTCCGACTG TATATCTACACCGCGTGTTTACTAGAGAGAATACCGTTTACGTTTTAATG TGTGTATTCAATCTTAGACCCAGGGACTGAATGGAGGAAGGGATTCGGAG CAGGGTTTGGGACGTGTCTCGGTTTGGTGCTCATTGGCGGCCTGACTGCA AAGATCGTCATCTGGCAATGCCGAAAAAAGGACGAGAAGTGAGTATACAC CATAGAAGAATTTGATGAAAACATTCAGTACATCTTTTTTCCTTTCTCTC TCTATGTTCTGACATTGTCCTCCCCAGTACACAGGCGTCATACTGGTGTC ATATCAGTATGCGATATGGACCTGTAAGGTCTCATATTCTTATGTTAATC TACATTCTCGTGCATGATTTTCTATGTCGTAGATGTTCCCCATTGACGAC ATCTAACGATTGCTGTTGTTTTTCTTTCAGGCCACCAGTCGTACCTATTT GACACCATTACTTAACAAGTTTTCATGTACATACTAAGCTAATTTAAGAC ATATAGTGTACTATACTACAGAGTAATAAACCCGATACATATGGTAAGAA CATGTTAGGTAAAGTACCCTGGCACCTGATGAACGATGTCGGCTTATTGT TAAGTAATACGATGTAGATTTGATGAAAGATCAAATGATTGTTGACTATT TTAGTATCGAGGTATTTCGGCTTCAAATACTGTTACCCGGCAATAAAGCT GACACACTCCTTTTTCATGCAGCTACAACGGATATGTATTATATAGCGTC GGCGAGCATTGTATGAAGTCCAGGTGGAAGAAATGCAATGGTTTTGTAAG ATCGGGAAAAAATATCAAATGTGTACCTTACCATTATGTATCAAAAGCGT AGACAAGTTGTATTCCGTAGCAGTTCTTATAATAGTCACTTGTTCCACTT GTCACCATTGTTAACTTGCACTATCTGTATACCTTTTCTATGTATTGTGT CATGTTGCAATTAGCCCTCGGGCAAGAACTTAGAAGTAAGACTCATTGAT TAAACCGTTTCCGAAGCTAAAATGTATCATAGTTATTCGTTCATCAGAAC CCGGAAGTACGTTCTGTTTGTGGTTGAAATTCCCCTCGCTGAGTCAACTG TCAGCTGATTGGCCATAGTTGACCTCTAGATGACTCGGCCGGGACAAAGC GATAGAAGGCCATAGAAGAGGGGGTTTGATCATAGTTTTGTTTGTTGTAA GAAATTAGAAAGAAAATAAAC

Coding sequence (CDS) from alignment at Sc0000086:21704..25524+

>Blg00341.0 ID=Blg00341.0|Name=Blg00341.0|organism=Branchiostoma lanceolatum|type=CDS|length=303bp|location=Sequence derived from alignment at Sc0000086:21704..25524+ (Branchiostoma lanceolatum)
ATGTTTCAGCTGAACAACGTCAGTATGGGTGATGCAGGCTACTACGAGGG
GGAACTGAAAACCGAATACCACATCAACAACGTCAACGCCAGGTTGATTG
TGAAAGCGTGCCCCCATGAACCGGAAGGAGGGGACACAGACACTGTGCAG
GCAAAGACAGACCCAGGGACTGAATGGAGGAAGGGATTCGGAGCAGGGTT
TGGGACGTGTCTCGGTTTGGTGCTCATTGGCGGCCTGACTGCAAAGATCG
TCATCTGGCAATGCCGAAAAAAGGACGAGAAGCCACCAGTCGTACCTATT
TGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00341.0Blg00341.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00341.0-exon-Sc0000086-1570713199:21704..23826Blg00341.0-exon-Sc0000086-1570713199:21704..23826Branchiostoma lanceolatumexon
Blg00341.0-exon-Sc0000086-1570713199:23984..24037Blg00341.0-exon-Sc0000086-1570713199:23984..24037Branchiostoma lanceolatumexon
Blg00341.0-exon-Sc0000086-1570713199:24371..24491Blg00341.0-exon-Sc0000086-1570713199:24371..24491Branchiostoma lanceolatumexon
Blg00341.0-exon-Sc0000086-1570713199:24734..25524Blg00341.0-exon-Sc0000086-1570713199:24734..25524Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:21704..25524 +
Properties
Property NameValue
GeneIDBlg00341