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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:406580..413637- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00336.4 ID=Blg00336.4|Name=Blg00336.4|organism=Branchiostoma lanceolatum|type=mRNA|length=7058bp|location=Sequence derived from alignment at Sc0000086:406580..413637- (Branchiostoma lanceolatum)
CTATTTTCCCAGCGACCCGCAGATGGCAGAGGCTGGTAGAGTCCAGAAAT
GGATCTATAGTCGAACAGCAACGCCGACTAGGGACCAAAGTAGATACTGC
TTTTCGAAAAGACCTTTCGAAATTATGAGCCTAAGCTTGGCAAATTCGAG
GACACATTTGTGCCTCGCTGGCTTTCATGTTTTTGCATACAGTTCAAGGT
TTAGGGCGCACAATTTTTTACCGTTAAAGTCGTAGAATCCGGGGGTCGCG
GTGAAATGCTGTGTGCTGCTACCTTAACATCAATTGGTGTATCAGGTACA
GTATCCTGACCTTTAACCTTTGCGCGTAGGAAATAAAAGTTGGCTCGCTA
TTTTTGTATAAGAAACGCATATTTATCGTCGTTATTACATCTGGTAGAAC
AATGGGTTGAATATGGAAGGAATCGTCACATCATTGGAGTTTCCGGAAGT
CCCAAATAGCGAGGATGATACCAGGGTAAGTGATGTGAACGGATTTGTGT
GTGGTGATGATATGCCCCCCTCCCCATCTTCAGCAAGTTCTAGTTCTTGG
ACGTATTTGGAAATAATTAAACGATACTCCTTTGTTTTGGATAACCACAG
ATTTTAACACTACGTAATTTACATTTTCAACATCTCCTTTGTCAGTTTTT
GGAGTCTTCAAGTGTCAAGTGTGAGATGATATTTTACAATGTTTAATACT
ATAATTTTGATATTCCTTGTTGTTGTTGTCCTTGTTTAACGTCTATTACA
TGGCTAGACGTTGTCTCTTGGTGTACATGCACAATGTACAGTTGCACATG
CACAAATGGACAGTATTAAGCAGGTTTTAATTTCAAACAAATTTTCCATT
CTGGCAGAAAATGCCGAATAGTCAAAAGTAGAAAATACCTGTTGTTTCTT
CCACTGCTCAGGACTGGAGCTACACCATGAGAAGAAGCATGCAGGTGCGT
CCAAATATAGCCATTTATGCAAATATGAGATTATTTTAATTAGCTCTAGC
AAACCATTCATTATCTTTTTTTTTATACCAACGGTATTAGCCATGGTGGT
AAGTACTATTTCCGAAACTTAATACAAATTTGTATGAAAAAGTAGTAAAT
GCAACTTCTTTCATCGGCGCAGATAATGTTACAAGTTACAACGGCACCAA
ACATATTGGACATTTACTGTAAACATATGTTGGTATCAGCAATTTCATAC
AGAAGCAGTGCACAGTGTGATTAGAAGTGATTAGAAGTTCCATACATGTA
TTTGTTCCATTCACTACTAGTATTACATGTACTTAGACATGGACTCAAAA
CATTTTTATCCATAGGAAATCCTTCCCAATGTGTTCCTGGGGCCATACTC
TGTAGCTACAAAGAGAAATGTAAGTCATATTTGTAGCTATGTATAGTGAT
ATCCTTTCTATCAGAACAAGTGTACAAATACTGTTGATTGTTAAGACTTG
TCTGATACTGTGTGGCATTGTCATTGTTGTGATTGGATGATGTTGTTTCT
AATGTTAAAAGAAACTAAAGAATGTCATCATTGAACGTGAAGCAGTCACA
AAGTCTAATCTCCAGTATTGAAAGTAGTGGTAGTAATTAGTACTTTTGTA
TACCTGATGATAGGTAATGTTACATGAATGATGAGTTGGTCTTTCTTTAC
CATTAAAACTACAATAAAAAAATCCATGTTTCCCCTTACAGCTTTCCAAC
CTGTTGGAGTTAGGCATCACCCATGTAGTGTGTGTTAGAGATACCCTGGA
GGCTAAGATTATCAAACCAAACTTTTCAGATCATTTCAGGTGAGTTTCGT
ATTATTACTGCTTATATAGGGGATATTCCTTTGAACGGAACAGGACATTT
TTCAACCTCTCTTATAGAAGAGCTATAAATACATGCTATAGAAGAGCTAT
AAGTATATGAAAAAAACAACTTAAACAAGGATATTATTGGTTGATAAAGG
TTGTCATGGTAAATGCAGCTCAGTAAATGGGTTCAAGCAGCAAGGACTAT
CATTTTTGATAAATTGTGAATAAAGAAGAATAAAATTGAGTCTTAACTGC
TGAATTACTAAATTGTGAATAAAGTACAAAATGATTGATGATTGTAATGA
AGTTGATGGTGAAATCATAATTTTTTTCGTTTTGTCTTTTCTTCTTTCAG
ATACTTGGTACTGGATGTTGCAGATAAAACCACAGAAAACATAATTCAAC
ACTTTCCTAAGGTGACATGTGCTATCCACTTTTATCTAGATATGATGTTG
AGGTGTCCTTCCTCAGAAATGTGATAGGTGGCATGGTTGGACAAAAAGAC
TAAATGATTTTTTTTTCATATCAATGATAAAACCATAGAAAACATAATTC
AACACTTTCCTAAGGTGACATGTGCTATCCACTTTAATCTAGATATGATG
TTGAGGTGTCCTTCCTCAGAAATATGATAGGTGGCATGGTTGGACAAAAA
GACTAAGAATTTTTTTTCATATCAATGTAACACAATACTTGTAGCTGATA
GAGGCTCATTGCTATGAGAAGGAAAGGTAGAATTAGGGATAAACTGATGT
GTAAGGAAAGGAAAATTGAATAATGGAAAATGGAGGCATTGCATAGAAGT
GAATGTCATTGCACACTATGCACGAATGCTCAGGGCTAAAAATTGATTTG
GTGGAATAGGTACCCTTGTGTAACTAGCCTACAAAAGTTTATGTTATAAC
ACAGTTTTTATTACTTTTCTGACACAAATATCAAGAATATGCTGTAATCT
GATGTACAATAGTAGCTGAATTTAGATCAAATTGCCATATCAGCATTTTC
ATCTTTTCTTCCCAACAAAGGTTAAAGAATTCATGGACCAGTGTCTACAA
ACTGGAGGTAGGGGACAATCTATGGAAGTATTCAATTGTACACTTTCATT
AATGCCTTTCCTTAGATCCAATGAGACAGAAACCAATACATCCTCTGTAC
AGCCATTTTTACTTCTTGTTTCTTACAGGGAAAGTCCTAGTACATGGCAA
TGGGGGCATATCCAGAAGGTATGTATACTGTGCAGATACTTGTGTAAAAT
TCATTATCATTGCATTGCATTAGGAACTTAAAGAGCTTTGGAAAGTCGTC
TTTTTTAACTGAATGTTGAAATGACATAAGCATCTTTTAATATCCTCCAG
AAGTTGCCCATATATTGTGTTACTTTTTATGCTTACAGTGCTGCTCTGGT
GATAGCTTACATGATGGAGACATATGGAATGACTTATAGGTGAGTTTTGT
CTCATAAGGCCACACCAACTTGATTTTATGGATGACATCCTCTGGAGACC
CCAAAACTAATGCGCGCGGGCGAAAAAAAAGAAAATCCAGCACAAAAAAA
AATGCTGCTAAACCACAGGACTACTAGTACAAAGCTGGTATTGCGAACAA
TACTGGTATTGCGTACATGTAGGTTGTCTTGTTCATCATAGCAGACTCAG
CGCAAGTGATTGATTTTTAATATATTGACAAGAACGACCAAAGAAGTATA
CTATTAGAAGGTATTTGGCTCCAAGGACTGTGGATGATATATGATTGTGA
TGAGAATACTTAGTCTAGTACTCATATACACCCATAAGGGCAGTTTCAAC
ATACATGGCATTGAACTCCATATTAAGCATTCCATAGTTTACGCTCACAA
ATCTCACTGTGAGACCTCTGCCAATCCCTCAATTCCTCTCCCATGTCTCT
CATTATTGCCAAAGAAACGTGTGAGAGCCACTCTGGATAGGTCGTGTTTG
AAATTGTCTGGGCGATTCTCTCGTACAACTGTAGAAACGCAAAATCCCCC
TAGCCAACATCGATGGCATATCAATCCACAAATACGCCCCGGTTTTTCGA
TAAGCCGGCACAATGCTAGCCTTTGCGGCAATCTAAGTCAGCAAGTTCCG
GAGTTCTGTGTAGCCTTGGAGGAGGTGATTTTTTCTGTGTTTTTTTTACA
ACAGGCGAAAATCAATGCGCGCGCGGATGTCATCCATAAGATTAAGATGG
TGTGGCCTAACTACATATTATTAATCATTTTTCTAGACAAATGCAGAGAA
GAGATCATCTACAAGTACAAACTCTGTATTTGATCACCCATGGATGCATC
TATTCTAACAAGATCTATTTAGTGAGAAATATGGATGCACTGAAATACAA
AACAGGGATCTGTATACATTATATTTCTGTGTTTTTTGATGATTGTTGAT
TGTTGAATGTTGTTGTGTATTGTCAGAGCTGCGTTCCATCATGTACAACA
GAGGAGATTCTGTATCCAGCCTAACGAGGGGTTTGCTAACCAGCTGATGG
AGTATGAACCCATCTACATGGCCAGACTCACCGTCAGACCTGGGACCTGC
TGGGGACAGAGCAACACACAGCTCCATGGTAACTCACGTCTCCATGGTAA
CACTCATCTCCATGGTAACACTCATCTCCATGGTAACATACTGTCCATGG
AAACATATGTGTGAATGGTAACATAATGTACAACTCCTTGGTGTAACATA
CAAGTCCTTGGTAACACAATAGTACAATATTGCTTGGGGATTTTTCATTA
ACTTAGAAAAGACATCAACAGGGGAATATCCACCACTTGCTTGCAAATAG
GTTGGCTTTCCACTAGAGACTTTTCAATGAAATTGTGTATGTATGAGATG
ATAAGAAAGTTCATGCATCTAAGTATGCATGAGTAAGGTCAAAGAGACAT
AAACAAACCATTGTTATGCAAATTGACCGTCAGTGTCTGGACATGTATAA
AGAATGGTTAAGGCAAGAACTGTTTGAAAGTCAGGTACTTAGAAATGTGA
ACTTCCTTATAGACATAATGAGGCGATAGATTGCAATATGAAAAATTGAC
ATAGCTACCTCATAATGAAGTATGAAGAGAAATTTTGTGTTATTGTTTTC
CTTCATCTCACCGTTGTTCCCCCCCAGGTGGTAGGAAACGGAGCCTGGAT
GAGGAGGCTGGGGAGGAGGCCATGGACCAGACAGGAGACCCTAGTCTGGA
CCCACAGAACAAGTCACATCATCTGGACACATGAGGCCGGACAGATGTGC
TCTCACAACTTACATATTCAATTTTGATTGACAGTACAATAATTACTGTA
AGATTGGGTTTAAGGGTCCATTTTCTTTGCAATATCACTCTGTGTTTGTG
TCCAAAACGTGTCTAAGAAAATTTGATGACTTGTGATGTCAAAACGTTGT
TTTTTTCCTGTCATCATAAAAGATTAGTTTATGACTACACATATAGGGGC
CTTGTAGTCCATACATACTTTAGTTTGGCAACTTGATATTCATTTCAACC
CTTCGTGTAATCTGCAGGGTTGTGTTTTAAGTCATGGAGAATCATAAAAG
AATGTTGGTAGTCAATTCAACTTGTTGACAATGTAAGATATGTGGCTGAC
ATTACTTGTGAAACGTTGTTGATTAATTTTACAGGGACCAAGGCTACAAT
TTTGGGTGCATATTTCTACATTGATTTTGCAATAATAATAGAAAGATTTT
TTCCATTTCACCAGCAATCAGTAGTTCCGCTTTGAGTTAACACGTAAATT
CGTAACTGCAATGTCAGTGTAGTAGGTAGGGTGTACCATAATTATGAAAA
AATAACAACATTGTCCAATGTGCAAAATATGTATGTTGTAAAGTTCACAG
TATGCCCAAACTGCTACAGATCATATGTTTTTGTGTTGTTTGCTTTAGAG
ATGGATGGGTTACGGTGGTACAACACTAGAGAAAAGTGGAATGCCATGTG
TATTAGGGTCGGATAAAATGTAACTTGGTTTGTTGTTCTTGTGAACGGTA
GCTTTTATAGCCATGTGTCAATCAAGTTATTGATGCTCTTGTCTTAGCAT
TAAAAAAGCATAACATTCTTATTGATATTACATGTTAGCTTCTATTCACT
GATTTGGTGAAAAGGTAGCTTATAAGTAGTAGGGATAGAAACTAGTGGTT
TGTGTGTCAAACATGTATATGAACATATAATGTTACACGTGAAGATTTTC
ACAGATACATGTATATGTATATGATGAGGACCATATTGTTATCAGGGTCT
ACCACTGTGCCTTAGCTTTTCTTGTGTTACTTGTTTTTCACATTGATCTG
TGTACTCTTATAGACGATGTTGCAATTTTTGTGAGTGTTGCACATGTCAA
GTAGAAAGGGTTCTTGTTATGTTCTTGACATTTATGTAGCCATAGTGACA
GGCTCTTGGGCCATATCAATTAACGTGTGGTAAGAGAACTTAGGAAACCA
TAGTGTACCAAGGCACCTGCCTATGGAAAGAGGTGGGGAGGGGGTCCCCT
TACTTTTGGGAAGAGTGCCTAAAGTATGCATAAAATGATGCATTTTAAGC
ATGCTTTGTGCAAATTACTGATACACTATTCACCATCTGTACAGGGAACG
TTAATCCGTTTACGCCAAAGTGTTGAACAAAATTTATCCCTTGAAGAGAA
ATCTTTGGGAAAACAGGCCAATTGAGTACTATTACTAGATACCCTGTTTG
AATGGATTCTTATCAAGTACTTATTTACAAGTGAGCTCTGTGTACAACTA
AACACAAGAGGTAGGTGTGTACACATGTATGTCTGCATGTTTTCTGTGGA
TGTCCTGATCATTTGTCTAAAAGCCTCGTGTGTTCAGTACTGTAGTTGCT
AAGGTTCAACAACATTGTAAATATATGTAGCAACATCGCAATGGGTTAAC
GTTGGTTATCCACTACGCATTGTAGAGATCATAAAGGAGTCAGAGTCTAC
ACTGAAATGTTATTGTAGATGTTTTCAGCAATATTTATATATCACTGTTA
CATAACTGATGATGTTTCTTGTATGTGCAAGTATGGACTGAGATGAACAT
GGCTATAACACAGTTGTAGGAAAGTAACCCCAGTACAAACAAACAAATGT
ATATCCTTTGAATACTGCAAAACAACACAATAAACGTAGTCCAGGCAACT
GTCTGTATGAAACTTTGCACTTTATTTCTAAGAGACCTCAAATACGTGAC
AATGATTTATCAGCAAAATGTTACAATGAAATCTAGGCGGCCCCTATTTT
GAGTGGTA Coding sequence (CDS) from alignment at Sc0000086:406580..413637- >Blg00336.4 ID=Blg00336.4|Name=Blg00336.4|organism=Branchiostoma lanceolatum|type=CDS|length=618bp|location=Sequence derived from alignment at Sc0000086:406580..413637- (Branchiostoma lanceolatum)
ATGAGAAGAAGCATGCAGGAAATCCTTCCCAATGTGTTCCTGGGGCCATA
CTCTGTAGCTACAAAGAGAAATCTTTCCAACCTGTTGGAGTTAGGCATCA
CCCATGTAGTGTGTGTTAGAGATACCCTGGAGGCTAAGATTATCAAACCA
AACTTTTCAGATCATTTCAGATACTTGGTACTGGATGTTGCAGATAAAAC
CACAGAAAACATAATTCAACACTTTCCTAAGGTTAAAGAATTCATGGACC
AGTGTCTACAAACTGGAGGGAAAGTCCTAGTACATGGCAATGGGGGCATA
TCCAGAAGTGCTGCTCTGGTGATAGCTTACATGATGGAGACATATGGAAT
GACTTATAGAGCTGCGTTCCATCATGTACAACAGAGGAGATTCTGTATCC
AGCCTAACGAGGGGTTTGCTAACCAGCTGATGGAGTATGAACCCATCTAC
ATGGCCAGACTCACCGTCAGACCTGGGACCTGCTGGGGACAGAGCAACAC
ACAGCTCCATGGTGGTAGGAAACGGAGCCTGGATGAGGAGGCTGGGGAGG
AGGCCATGGACCAGACAGGAGACCCTAGTCTGGACCCACAGAACAAGTCA
CATCATCTGGACACATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00336.4-exon-Sc0000086-1570713199:412968..413637 | Blg00336.4-exon-Sc0000086-1570713199:412968..413637 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:412694..412726 | Blg00336.4-exon-Sc0000086-1570713199:412694..412726 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:412269..412322 | Blg00336.4-exon-Sc0000086-1570713199:412269..412322 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:411849..411946 | Blg00336.4-exon-Sc0000086-1570713199:411849..411946 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:411427..411487 | Blg00336.4-exon-Sc0000086-1570713199:411427..411487 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:410781..410817 | Blg00336.4-exon-Sc0000086-1570713199:410781..410817 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:410620..410659 | Blg00336.4-exon-Sc0000086-1570713199:410620..410659 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:410399..410449 | Blg00336.4-exon-Sc0000086-1570713199:410399..410449 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:409260..409411 | Blg00336.4-exon-Sc0000086-1570713199:409260..409411 | Branchiostoma lanceolatum | exon |
| Blg00336.4-exon-Sc0000086-1570713199:406580..408710 | Blg00336.4-exon-Sc0000086-1570713199:406580..408710 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:406580..413637 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00336 |
|
