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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:611449..615042- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00335.0 ID=Blg00335.0|Name=Blg00335.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3594bp|location=Sequence derived from alignment at Sc0000086:611449..615042- (Branchiostoma lanceolatum) ATGGCTCACAACTTGTCCTTTGATTTTGAAGAGGAGAGACGAGGGATCAC
TGCCCGAATGAAGGCGGCGATGGAAAGCATTATAGATAAGGTATAACTAT
ATAACGTTTAATATCGTTTATCTCAGCCCTCCCCCCACTTCGACGTCTAA
CTGTAACCGACTAGCGACTGTCATGATGTCACAAATTATGTAACCCGGCG
AATAAAAGGTTAACTTGATTTTTAATGTTATCACCATTTCAGTACCAGAA
TGTTGGTGAAGAAGAAGGTGACTTCTTTACAATGGACGACTTGCAGATAT
GTGAAGACAAAGGTACGTATCATTGTGACAAGGCCCTGTATGACAACAGT
GATTATTACTGTGTGTGTGTGTGTGTGTTTTTTTAGCTCTACAAGGAAAT
TTGAGGATCGTATATAATCCTTTCCTTTATATGAAGGAACTGTAAGTTAA
CATCAACTCTCAGTTATAGTTCTGCCTCATACGTACTCTAAAGCCACCAG
GCTATTTTTATTGACATGAATTTTTTCCACCATATTGTCACAAGATTTTC
CTATCAGTATCGATATTTTTAATTATTGTTGATAATGAAAATGTAAAATG
AAATATCATTTATTGATTCCTCAGGTCAACTCAAACATCAAGAGGTAGCA
CATTTTGGCTTCCTACAAGGTACATGTGTTTTTCTTGTCTTGCATTTTCC
TATTCTATACTTCAATATTACTTGTCTAATTACTTTGATGTTGTGATATG
ATGTTATTGCGCTAGAGAGTTATTTCAACATAGTATATTCATTTATAGAC
TCATAATTTTATATGACGGGAAGTATTACTGTATAGAATTAGGAGTGTTC
CTAAATCTATTCATGCCTGCATACCAATACAGAATGCACAGTCACCAGCC
AATCATGTTGCCACTTACTAGTATGGTAAAGAAGCAACGATATTGGCTGG
TTACTTTCCCTATAACAACAGGTGGGGGAACATTTGATTGGCCAGACCTC
AGATACAGCCCAAAAGAGGGATAGTAGAATAATTGGCTGGGCGGCCTGAG
GCCTGGCTTTGTACTTAGGCCTGGTAGGCCTACTAGTACTGTACTAGTAT
GTGAGGATGCCATTTTACAGCCTAAATGATACATACTGTGATGTATATGT
TCTGATGTGAATGGTACAGATGTAGATGTACATGTACCAGCCGATAGCCT
GTATAGGATATCATAGTCATACATCATCATTGTATATTAAGTTCTGATAT
CTATTTGCTTTGTTGCATTTGTAGCTGCTGCCTGCAGTACCAATGATGAT
GATGATGATGACAGGGAGCCTGACAATGACGATGATCTTGAGGATGATGA
TGAACAGCCATCTGCAGTAAAGATGCTGAGGGACTTTGGTAGTAGGGTGG
GTTTGCTACATCAATCCTGATTGGAAGTGATACATTTACATTTAGATTAT
ATTAAAAGAACTTAAAGAGTTCTATACGTGAAAAAAGATCACAATGTCTA
TCATAGCTTAAAGTTAAACCTTGTATGTCTGTCAGAGCATACTATGATCT
AGCGGATTAGCTTAGCAATCCTTTTATTGCAGATACATATACCAATCTAC
CTGGTTGACTTCTCAACCCTGATGCACTTTGTCTTGTAACATTTCACACA
GTCAAAATAGAGATATTTTGTAGCACAAATGAAGACATTCATTGTACAGT
GAATTGTTGGTTTAAGATCTACTTTTCTTTTGATGGATAAATGACATGCT
CATTATTTTCTGTGTAGATGGAGCACTCCATATGTAGCAAGATGATATGT
GAGGAAGGTGAGGACGGTAAAGTCCGCTGGATACTTCAAGACGGTGAGTT
CTGTGACGGTCCTATTGACTCACAATGTTGTGGATTTTATTTTAAGTTTT
TATTGATGTACAAATGTACAGTTCAAGTAATACAGCAAAGGTCTACATTA
CATCCTCAAAGACACAGTTGTATAACCCCTCGCATAAGTTGGCAAATTAT
CCTCATTTTTCAACCACAGAATATTTATTGATATTATACAATACCAGTAA
TTCATAGGGATAGTGGTTAAACTGTGTTTTAAGAATTTCAAGAATTCAAA
AAGGCTCTGCTCCTAAGGCATTGTCCAAAAGAAATCCTTAAAACATGACA
TTGTGTGCCTCTTTCTTAGATGTGGAGGAGGACATCCTGACAACTATTGG
TGATAGCGACAGTGACCGAGGTGACATCAGTGGTGAGGACGAGTGGGCAG
AGAGTGATGAGGAGGAGGATGCAGAGAGGAGATCACCAGTCGAGCACGAC
GAACAAAGTCTTGAAGACAGCAGAAGCTCAGCTGGTACCGCAGAAAGTGA
AGAAGAGTTGTCAGATTTAAGTGGTATAAGTTACAGAGAACCACAAAATT
CTAACACATCAACCAATAGCATCAACCAAGATCACAAGAGAAACAATGGG
TACAAAGAGTCCTTTCACAAAAGTAAAGAGTCTATGAATATGCCTACAAA
CAGCTACAAAGACAACGGGAGCCATCAAAAAAGTCTTCACAAACCAACTT
ATGTATGTACTAATGGAAGCAACAAAGACCACGAAAGAGACTATGACTAT
GAAGAAAAAACTCTGCCAGTTTACAAAAGTAGAGAGTCAGCGGATATGCC
TACAAACAAGTACAAGAACAATGGAAATGGGAGCTATGGAAAATGTGTTG
ACAAACACAACAAAACAAGTAACACACCTACCACTAGCAGCAACAAAGAT
CAAAAGAGAGATGATGGCTATAAAGAGAAAACTTTTCCAGTTCACAAAAG
TAGAGAATCTGAGGATATGTCTACCAACAGGTACAAAGACAGGAAGGGTA
TTGGCAAACACAACAAACCAAATAACATTCCTACAAATGGCAGTAGAAAC
TCAGCTGCTATTGTGGAAAGTGAGGATGAACTCTCAGATTCAAGTGGTAT
TGGTTATAAAGAACCGCACAAATATGACACATTCACAGACGCCAGAAGCC
AAGATTACAAAAGAGACGATGGCTACAGAAAGAAATCTATGCCAGCTCAC
AAAAGTAGAGAGTCTATGGATATGCCTACAAACAAGTGCAAGGACAATGG
GAGCTATAGGAATAAAATTTACAACAAAGCAACTAGCGTTTATACCAATG
GCAACAGAAGATCAACTGCAGTTGTGGAAAGTGAGGATGAACTCTCGGAT
TCAAGTGGTATTAGTTATAAAGAACCACACAAATCTAACACAACCATAGA
TGCCAGAAGCAAAGATTACAAAAAAGACGATGGCTATAAAAAGAAATCTA
TGCCAGTTCACAAAAGTAGAGAATCCGTGGAAATGCCTACAAACAAGCAC
AAGGACAACGGGAGCTGTAAGAAGAGTCTTAAGGAATACAAACCAAATAA
CGTTCCTACAAATGGCAGTAGAAGCTCAGCTGCTGTTGTAGACAGTGAAG
ATGAACTCTCAGATTCAAGTGGCATTAGTTATAAAGAAACACACAAATCT
GACAACTCCACTGATACCAGAAGCAAAGATCACAGAAGAGACAATGGCTA
TAAAAAGAAATCTATGCCAGTTCACAAAAGTAGAGAACCTGTGA Coding sequence (CDS) from alignment at Sc0000086:611449..615042- >Blg00335.0 ID=Blg00335.0|Name=Blg00335.0|organism=Branchiostoma lanceolatum|type=CDS|length=642bp|location=Sequence derived from alignment at Sc0000086:611449..615042- (Branchiostoma lanceolatum) ATGGCTCACAACTTGTCCTTTGATTTTGAAGAGGAGAGACGAGGGATCAC TGCCCGAATGAAGGCGGCGATGGAAAGCATTATAGATAAGTACCAGAATG TTGGTGAAGAAGAAGGTGACTTCTTTACAATGGACGACTTGCAGATATGT GAAGACAAAGGTCAACTCAAACATCAAGAGGTAGCACATTTTGGCTTCCT ACAAGCTGCTGCCTGCAGTACCAATGATGATGATGATGATGACAGGGAGC CTGACAATGACGATGATCTTGAGGATGATGATGAACAGCCATCTGCAGTA AAGATGCTGAGGGACTTTGGTAGTAGGATGGAGCACTCCATATGTAGCAA GATGATATGTGAGGAAGGTGAGGACGGTAAAGTCCGCTGGATACTTCAAG ACGATGTGGAGGAGGACATCCTGACAACTATTGGTGATAGCGACAGTGAC CGAGGTGACATCAGTGGTGAGGACGAGTGGGCAGAGAGTGATGAGGAGGA GGATGCAGAGAGGAGATCACCAGTCGAGCACGACGAACAAAGTCTTGAAG ACAGCAGAAGCTCAGCTGAAGCAAAGATCACAGAAGAGACAATGGCTATA AAAAGAAATCTATGCCAGTTCACAAAAGTAGAGAACCTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00335.0-exon-Sc0000086-1570713199:614953..615042 | Blg00335.0-exon-Sc0000086-1570713199:614953..615042 | Branchiostoma lanceolatum | exon |
Blg00335.0-exon-Sc0000086-1570713199:614731..614800 | Blg00335.0-exon-Sc0000086-1570713199:614731..614800 | Branchiostoma lanceolatum | exon |
Blg00335.0-exon-Sc0000086-1570713199:614374..614418 | Blg00335.0-exon-Sc0000086-1570713199:614374..614418 | Branchiostoma lanceolatum | exon |
Blg00335.0-exon-Sc0000086-1570713199:613647..613768 | Blg00335.0-exon-Sc0000086-1570713199:613647..613768 | Branchiostoma lanceolatum | exon |
Blg00335.0-exon-Sc0000086-1570713199:613200..613275 | Blg00335.0-exon-Sc0000086-1570713199:613200..613275 | Branchiostoma lanceolatum | exon |
Blg00335.0-exon-Sc0000086-1570713199:612709..612873 | Blg00335.0-exon-Sc0000086-1570713199:612709..612873 | Branchiostoma lanceolatum | exon |
Blg00335.0-exon-Sc0000086-1570713199:611449..611522 | Blg00335.0-exon-Sc0000086-1570713199:611449..611522 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:611449..615042 - |
Properties
Property Name | Value |
GeneID | Blg00335 |
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