Blg00334.0 (mRNA) - B. lanceolatum

Overview
NameBlg00334.0
Unique NameBlg00334.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:744677..747652+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00334.0 ID=Blg00334.0|Name=Blg00334.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2976bp|location=Sequence derived from alignment at Sc0000086:744677..747652+ (Branchiostoma lanceolatum)
ATGGATGGAATGCGAGGACTGTTAGCCTGTGCCTGCGTAGTACTCGCCAT CTGTGGCATAATTCTCTCGGGTAAGTTAACATGGTTTTGTCTCGTAGTTT TATTACCTAAACTGGTCACAAGACTGTGTATCGGGCCTGCGCGCCGTGCC CCTCGGCTGCCAAAGAGCCATTTACCGCCTGTCTGGGCCCAGAGAGATTA CGGGCAAAATCCCCGGAGTATGCTGGACAGCTGGGCGGCGAACAGAGCTT TAATACGGTGCTCAGCGATACCTGGCATCATTATCTTACATTCATAGGTT GATCACCAGGGTTGGGTAGGTCGCGCAAAAGAAGTCCCGAGATTTCCCTT GAATATGTTTTGGCTGTTTTTTAATGATTAACATATTAACGTTATGTGTT GTGTCATTGGAAAGATTGTATTTTTTCTTTACAAGTTACTCATCTGCTAT GACCACGCTTTTGCGAATGAGCACCACGCGTACGGCTGCCTTTTTTCGTA GGTGGGTCGGCAAAAAAACTTCTGCAATTTCTTTCCAACTTCAGACACAA TTGGCAAACTGGTTGTACCTGCAGGAGGCAGACCTATAAATGTGACATAC ACAAATTCAATTTACCCTACTTAGCCCAGACTTAACCATCCAGAATGGCG GACTGTTCATTTGGTGCAAACGCCCCATTCAAACGTGGGCATAGTCTCAT TTCTTAACCGTTTAATGCTACTCTCTTTAATACAGAGTTAAGTTCAAAAC AACCAAGCCATCTGTCGATAGCGTACACTTCAGCAGCCCCCTCTACCGGG ATCAAAGCCCTCTGCAGACAACCCCAGATCGAAACAACAGAACCGTGAAT CAAACAGGTCGATGTTTTCTCTGATCGTAATATCATTCTGTACTTTGAAA ATTGCCATTACCACCACTGTTGTATAGCTTGACTAATGTTCACAAATAAG GAACCTTTCTGACCGACCGAATTTCTCATCAGGTGAAAGTTAACCCTTGT ATTAGAGTCTTTACATAATTTCTGTGCCACCTCCAGGGTATCCCGGGTAC ACAGAACGAAATGGAGCCCACTACAAGGTGTTCACCAAATTCATGACGTT CAATGCTGCCAAGAAGACCTGTGCAGCAGTTGGAGGCCATCTTGCCGATG TTAAGACGAAGGCGCTGCACGACTTCCTTGTCACCGAGATTCAAGACGTT GATCATGATACAGGCACAAGTTACTGGATCGGGCTTCATCGTTTGATAGT AAGTGTGTTGCATCAAATATAATTGTTGTTTTACCATCAAGAACTGAGAT ATTATTTTGTGTGTGTGTGTGCGTTTCCGGTACAATACTTAAGAGCCTTC GGATGGATGTGATCTTTGAAAGACGCTGGTCAATTTATATCTCCATGGAG ATATTATGTTGTGTGTGTCTGTGTGCGTGTGCGTGTCTGTGTGTGTGTCT GTGTGCGTGTGCGTGTCTGTGTGTGTGTCTGTGTCTCTGTGTGTTTGTGT ATGTGTGTTGGTGTGTTTGTGTGACGGCCTTTGGTTTCTTCCATTTTTTC TCATGTATTTTTGCCCCCATTTTTCGGCTTCGTCTGTTCGTTATCTTCCT CGTATGTCTTGCGTTTTCTTGATGATTACCAAAACATTATTCTACAAGTT GGCGTAATCTTAATTACCATCAACTGAGCACTCATACAGTCTAGTAATGA TGCAAAAATAGAGATATTGGAGTTTGTGTGGGAAGCGTCCAGAGAGGCTG GCTATTCCACGATATTCAGAAAGATGTGAGCAAACCATCTAAGAAACTAA CTCTATGCTCTTTGCATTCTTTACTCTCAGTTTTATTGTAATGATTGATG ACAAATGTAGATGACAGTTTTACATAGCTCATATTAAGTACTTAGCTTCC AATATTCAGTGGCTAAACGTGTATTTACCTTCAAAACAATAGAGTGAGTG GACGTGGTCTGATGGAACTCCTGTTAGCTTCACCAACTGGGCACCGGGAG AGCCCTTAGCCAGGCAACTGCAGGACCGGCACTGTGGGCAACTCTGGGCG CGGGCAGGTTTTCTGTGGGACGACCAGTTTTGCCATTACCAGAACCACTT CATCTGTCAAATCGGTACTTTTGCATGTCATATTCAGACTTTTGAAGCTT CATTGTAAATTGCGTTTTGACTTCTATGGGTTTTTTTTCTCCAACTTCCT CGGGTTTATTCTAAAAGTCAAGCGACATTGACAATTCTTGCTATTTGCAT TTTTATCAGGTCCTGCTGAAGGGGATGGCTATGGACAATCTAACGGTAAT ATCCGCCATTTCCTATATCAACCGCTGCAATATTTGCATGCATGCATCTC CCATTGATGAATGACACCGACGTATATGCCACACATAGGCCCTAAAACGT ATGATTTTCGGTACGCTATATCGGCTCAGATAAACTAATCCTACCACATA GGCCTCTTCCCTTTGCAATGTTACTTTCCAACAAAATGATGTCAGGAGTA GGTAGACTTGCATACATCTGAGAAAGACCATAGTTTCGGTCAAACATTCG CATTATAGATATGTATTTCATGAGTTAATAAAACCAAAAACTTTGACAAT GTATTGACAAGCTTTAAATCTAAACCCAAGGCAAACAAAATACGAAATTG TTGCACTCCATAATTATCATAAACAGTTGATAACTAACATGCTGAAGATG AAGGGATTTTTTTTCTTTATCCTTACAGTCTGCGCGGGAGAGCCTGACGG GTCTGACTACCGCGGGAACCTCTCCGTCACCAGGACAGGGAAGACTTGTC AGCGGTGGGATGTCGACTCTCCACATTGTCGTATTTACCTACCAGAGAAG CACCATGAGTTGGTGGAGAACTACTGCCGTAACCCAGGGGCCGATGATGT AACCTTGTGGTGCTACACAACGGACCCTAGCACCCGATGGGAGTACTGCA ACAACTCTGCTTGCCCCTTTTGGTAA

Coding sequence (CDS) from alignment at Sc0000086:744677..747652+

>Blg00334.0 ID=Blg00334.0|Name=Blg00334.0|organism=Branchiostoma lanceolatum|type=CDS|length=738bp|location=Sequence derived from alignment at Sc0000086:744677..747652+ (Branchiostoma lanceolatum)
ATGGATGGAATGCGAGGACTGTTAGCCTGTGCCTGCGTAGTACTCGCCAT
CTGTGGCATAATTCTCTCGGGGTATCCCGGGTACACAGAACGAAATGGAG
CCCACTACAAGGTGTTCACCAAATTCATGACGTTCAATGCTGCCAAGAAG
ACCTGTGCAGCAGTTGGAGGCCATCTTGCCGATGTTAAGACGAAGGCGCT
GCACGACTTCCTTGTCACCGAGATTCAAGACGTTGATCATGATACAGGCA
CAAGTTACTGGATCGGGCTTCATCGTTTGATAAGTGAGTGGACGTGGTCT
GATGGAACTCCTGTTAGCTTCACCAACTGGGCACCGGGAGAGCCCTTAGC
CAGGCAACTGCAGGACCGGCACTGTGGGCAACTCTGGGCGCGGGCAGGTT
TTCTGTGGGACGACCAGTTTTGCCATTACCAGAACCACTTCATCTGTCAA
ATCGGTCCTGCTGAAGGGGATGGCTATGGACAATCTAACGTCTGCGCGGG
AGAGCCTGACGGGTCTGACTACCGCGGGAACCTCTCCGTCACCAGGACAG
GGAAGACTTGTCAGCGGTGGGATGTCGACTCTCCACATTGTCGTATTTAC
CTACCAGAGAAGCACCATGAGTTGGTGGAGAACTACTGCCGTAACCCAGG
GGCCGATGATGTAACCTTGTGGTGCTACACAACGGACCCTAGCACCCGAT
GGGAGTACTGCAACAACTCTGCTTGCCCCTTTTGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00334.0Blg00334.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00334.0-exon-Sc0000086-1570713199:744677..744746Blg00334.0-exon-Sc0000086-1570713199:744677..744746Branchiostoma lanceolatumexon
Blg00334.0-exon-Sc0000086-1570713199:745713..745924Blg00334.0-exon-Sc0000086-1570713199:745713..745924Branchiostoma lanceolatumexon
Blg00334.0-exon-Sc0000086-1570713199:746619..746790Blg00334.0-exon-Sc0000086-1570713199:746619..746790Branchiostoma lanceolatumexon
Blg00334.0-exon-Sc0000086-1570713199:746936..746971Blg00334.0-exon-Sc0000086-1570713199:746936..746971Branchiostoma lanceolatumexon
Blg00334.0-exon-Sc0000086-1570713199:747405..747652Blg00334.0-exon-Sc0000086-1570713199:747405..747652Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:744677..747652 +
Properties
Property NameValue
GeneIDBlg00334