Blg00328.0 (mRNA) - B. lanceolatum

Overview
NameBlg00328.0
Unique NameBlg00328.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:1125463..1128448-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00328.0 ID=Blg00328.0|Name=Blg00328.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2986bp|location=Sequence derived from alignment at Sc0000086:1125463..1128448- (Branchiostoma lanceolatum)
AAAACAGCAAGTGGCGCAGTTCAGTAAAACACACCCAGACCACACACACG AACCGCAAGATGACTCACCGTACGAAAACGTCGTCCAAACTTCTTTTGGT CATTTTGCTGATATCGTCATCAGGACGTTCTGTCTCTGGTCAAGATGGCG GACAGTGTGGCGTGGACAGCTACTACGACCAGTTCACCCGAAATTGCGAG CCTTGTCGGCTGCTCTGTGAAGAGGCGAGGGGCACCATGGACGAATGCCG CGAAAAGTGTCCAGGTATCAGCTATTTTTGTTTTACTTTACATTATGTTC ATGTAGCAAAACTATCCCAAACGTTGCATTCATAATACATAGTTATACAT TAGTATACGAAATGACATCCATCTAATATCAGAATGCAAAGCTAGATGCA AGTGCTGATAGTAAAATGGAATTGTATACTACATCGTGTTTCGCAGACGT GGCTTAGGTTGCTGATGATATTAACAGCCAAATGCTACGTTCGGCCGGGA TCAAGTTCCTTGCACCTGGATATTGGTCTACTTTCTGAAAGAGACTGTGT ATGTTGGAATGTCCTTGATGTGTAGTGTTTAGTGCTGACTGCAAGCCTCT ACATGCCTGTATGTTTACACCTGCCACCGACAGTCTGCCTTCGGTATCCC AAATATCAAGCATACATTTCTTCAATATCGTCCTTTTCAAGCGCATTTTG ATACACAGAATATTGAGGCAATATTTGGAACAAAGTATGGAAAAAGATAC CACTATTAATATGACCAAATCGTGACAGGTTCTACATTGTAATAAAACGC TTTTTGCGTGGAACATTCCCATGGGAATTAACCAATAGTGGCAATAGATC GCGAAGCAAGGGGATTTTTCTTACATGTGCTTTGAGCACTGTACAAAGAG CATGACTATATGCAGACGGGAATTTCCCTCAGAACTGCAGAGACCCGGAC CTTTACCAACAGAGACAGGGAGACTTCCCAAGGACAGAGAGCACACTTTA TACGTAGAATTGCAGACATAGATGAAATAAACATAGTTAACACAATAGAC CACTTGCGTCAAGACTTCATTTCTTTGTTTGGCCATGTTGATTTTGTTTT CACATTATTTCTCATTTACGTTTTAGATTTTCTTTGCTAGTTCTGTACAG GAATATGCATCGTCAATTCATTTTGAGAAGGTAACAATTGACAAAAGGAA TGGCCTCGGCTAGCTTATATAACTTTGAGCTGTAACAAGGATGGTGTGTT TTAAATTTTTTATAGACTATTTGGCAAAACAACTGACAGAGGCTGAGCGG ACTGAACAGACGACCATCCCGACACACAGGCACCGTCATCCTGGGGGAAC CCACAGTGGTGAAGCATTTCCTGAAGGTACACTAGTCTTCTAAACCTTTA AATCAGCAGTGTCTAACTTCTGTGCAATATTCCCAGGTCTGTAATACTGA CAACGAAAATGTCTCGATAATCAAAATTATCCAGATGTAAGAATAAATGT ACTATTTGAGTGCAAATGATGAGAGTGTGGGGTGAAGACTTTCTGCTGTT TCTCACAATTTCTATCGGCATCCATTTCAGACGGCAGAATCATACTGTCA CACTACGAGGTGATGCTGGGATACATCATCCTGGCAGCCGTAGTTTTTGC CCTGGTGGCCGCCATTGTTGTGATGGCGATCGCGCTGTGCCGTCTGAATG GACGGCCACAAACCCGGGGCTCGGACATCGAAAAAGCGATGATCTCTCTC GCCCCGTCTCTGCAAGGTGGAAAACTAACACGGGACACGCCAGATGGAGG TCTGTTTTTCTAAAGTCTCATATTCCTTGCGTGATCGTAAAGACATCACC TACCAACCCCTGGAGCACCTACCAACCCCTGGAGCAGTGCAAATTATTGA TATTGTCCTAAACTTGTATTTTGCAGCGAGTTTATATGGGGATAAAGTTA CAGAAAAAGTTTACTTTCCTTTCTGCAAGCGGTATCTTTTTATTGAAATG AATAGAGTTGCGATAGAAACGAGTACTTGGATGTTAAAAGCTATGTTTCA TACATTTTCATATTGATAAGGCATGTGCATATAAATTTGCATTAATTTGC ATAAATCTACAGATGACGACAACCAGTCGGCTCCCGGCACCCCCGTGCAG ACCCTGGCCCGTCACCACTCCCGTGATGCCTTGTGCGCGGACACCGCCCT GCGCCAACAGCAGGCACATGACGAGGGGCGTCGCAGTTCCGAAGAGCAGG CCGCCTAAAACACTTCCTAGAGGATTTCAGAAGAAAGCTATTTTGGTCCT GAAAATCAGTCTGATTTTCAAGATGTAGATACATATTTTAAAGATATTTA CAGAGAGCTGATATCTTTTACAATCATCTAGTTTATGATATTTATTGTGT CATTCGGTATTGTTCCTACCAATCTGAAATAGATACATTCACATTCGTCA TGGTGTTGTATTTTGCCATTATCTTAAGCATGTAACGTTTTGATTATCAC ATGGCTCAGGCGTCGTAACATAATAAAGTACAGAGATTCCCTTGTAACAG GTGGCTATTAGCGTTCGGTAGAAGAATGAATGTAGCACATTCTGTCTTCG AGCTCTGTTTTTCCCATACCGTGGACTATATCAACCAAACGTTCAGAATG AGCAACGTCTTGTAGTGGGCGTACAAGTATTTTGAACAAATCAGTGCCTA GCCTTTCCGCTGAACGTCGCTGTAAGTGTGAATTACTATATATATTGCGT TTGAGCCATTCAGCTGTTACATAGAGTGGAAAGTTGAACTCAAATGTAGC ATGAGCTCATCTTCATCTTTCTGAATAATAAATTGTAGACACGCACTCTA AGAGTACAAGTTTGATCTCTACAAGATGTTCATCTCTTCATAACTAACAA ATGTCACGATTATCAAATCTAAAGCATCCATCAGAAATGTATTTACTTAT AAATGTACTTTCAGTACTGATGGAAATGAGGCCTTC

Coding sequence (CDS) from alignment at Sc0000086:1125463..1128448-

>Blg00328.0 ID=Blg00328.0|Name=Blg00328.0|organism=Branchiostoma lanceolatum|type=CDS|length=681bp|location=Sequence derived from alignment at Sc0000086:1125463..1128448- (Branchiostoma lanceolatum)
ATGACTCACCGTACGAAAACGTCGTCCAAACTTCTTTTGGTCATTTTGCT
GATATCGTCATCAGGACGTTCTGTCTCTGGTCAAGATGGCGGACAGTGTG
GCGTGGACAGCTACTACGACCAGTTCACCCGAAATTGCGAGCCTTGTCGG
CTGCTCTGTGAAGAGGCGAGGGGCACCATGGACGAATGCCGCGAAAAGTG
TCCAGACTATTTGGCAAAACAACTGACAGAGGCTGAGCGGACTGAACAGA
CGACCATCCCGACACACAGGCACCGTCATCCTGGGGGAACCCACAGTGGT
GAAGCATTTCCTGAAGACGGCAGAATCATACTGTCACACTACGAGGTGAT
GCTGGGATACATCATCCTGGCAGCCGTAGTTTTTGCCCTGGTGGCCGCCA
TTGTTGTGATGGCGATCGCGCTGTGCCGTCTGAATGGACGGCCACAAACC
CGGGGCTCGGACATCGAAAAAGCGATGATCTCTCTCGCCCCGTCTCTGCA
AGGTGGAAAACTAACACGGGACACGCCAGATGGAGATGACGACAACCAGT
CGGCTCCCGGCACCCCCGTGCAGACCCTGGCCCGTCACCACTCCCGTGAT
GCCTTGTGCGCGGACACCGCCCTGCGCCAACAGCAGGCACATGACGAGGG
GCGTCGCAGTTCCGAAGAGCAGGCCGCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00328.0Blg00328.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00328.0-exon-Sc0000086-1570713199:1128185..1128448Blg00328.0-exon-Sc0000086-1570713199:1128185..1128448Branchiostoma lanceolatumexon
Blg00328.0-exon-Sc0000086-1570713199:1127073..1127183Blg00328.0-exon-Sc0000086-1570713199:1127073..1127183Branchiostoma lanceolatumexon
Blg00328.0-exon-Sc0000086-1570713199:1126650..1126868Blg00328.0-exon-Sc0000086-1570713199:1126650..1126868Branchiostoma lanceolatumexon
Blg00328.0-exon-Sc0000086-1570713199:1125463..1126336Blg00328.0-exon-Sc0000086-1570713199:1125463..1126336Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:1125463..1128448 -
Properties
Property NameValue
GeneIDBlg00328