Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

Blg00325.0 (mRNA) - B. lanceolatum

Overview
NameBlg00325.0
Unique NameBlg00325.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:530420..532025-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00325.0 ID=Blg00325.0|Name=Blg00325.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1606bp|location=Sequence derived from alignment at Sc0000086:530420..532025- (Branchiostoma lanceolatum)
ATGGCGTGTAGTGGCGTAAACAAAGTCGGCGCCATTTTGTTCTTCTTACT ATGTTCAAACGCCACGCCCTTGGTCGTCGCAGGTGAGCTTTCTCTTTTAA ATGTTTCTACAATGGCAATTTGAATCATATTCTTATAACTTCAACATGTC CATTGTATTACTAAAGCGCTCCTGCACTGATTGTCTAATGTCTTCAAACG TTAAGACAGAAGCACTCAACCGTTTATATGAGCCATGTCACCTTTCAGAA ATCCATGTCAACATTGGCTCAGTGTACGTGGTATTTCAATATTTCGATTA ATCCCGAGTTATCACTGTCACCTGCCATTTGTGACAAGTGTGGGGACAAC AATAGGCTACTATTAGATGGGTACTTTTGTAAAATGTACATTGTTATTCT GAAAATGTGTCCAAATTGAATTGCAATCTTACTTTCACTTTCGTACATCC CTGGGGCGGGTGTTTATTCTATACCGCAGAACTCTAGTTATCTAAACGTC ATGCCCCGAGCTCATACTTTTCACACGTCATTGAAAGCTCTAATCTCTTA TGCAGTACAATATGTAGCACAATAGTAGATAAAGTTTTGGGAGATCTACA CTTTTGACATATTTCTTATTTCTCTTAAAGCCAGCGTAGCAATAGGTGGC CAGATCCAGGTCACAGTGGGGCTGGGACAACATGTCCCTCCCGGCGGGTC AGTCATCCTCCCCTGTAACTACTCCGTACCGTCCGACGACGTCCGGCCGC TGGTCAGCTGGTGGAAGGACAGAGGGCTGGTACTGACCAGACGGATCGTG TACGAGCACCAGGAGGGCCGGTTCAGTAAGGCGTATGACGAGTGGGCGGG GAGGACGGCCCTCCTCAGACAGGCGTCCCTACAGATGACCAACCTGACCA CAAACGACACGGGGAAGTACGAGTGTGAGATCAGGGTCCCTCTCAAGTAC GGGGCAGCCCGGGGGTTCATCAACCTGGACGTCGATGTTTCTGGAGGTGT GTTTTATCTAGTAGATCTCCAACAAACATCCTTATCATTCTTTCCTCATC TCACCTTGCTCTATCAACATTTCCATTAAAACCCTATAGCCTTTCGAGCA TTGATGACCCAGAGAGGTGACACAGGTCGTCAGAATAGAGAAATAAGATT ACTAGATTTATATTTTTTTCCAATCTTGTTTCCTTTTCCCAGTTTTGTTT CCCTTTCTATCAAGTAGTTGTCATAATATAAAGGAATTCGAAGTACATGT ATATTGGCGTTTGTTAGTCAGAAGTGTTCTATATCTAGTCATTACCCTGT TGTCTTTCGCTTTTACTTTCAGGTAAAAATAACCCTTCGTACAAACTCAG AACAGGTGTGTATTTTCTTTACAATTTTGTCAACATTTTTCATTGATTGC TGTTTAAACAACAGGTGATAAGGATGGAAGTTTTGACATTGTTCAGAAGT AGTTACTCATTTTTTTCCCTTTTTGTTCCAGGACTCGTTGTTGGAGTGGC TCTTGGAGTAGGGCTCATATCAGTCATAGCCGCGATACTGGTTCTCACAC TGCGCAAGAGGAAAATCACGACTGAGGCACAATATAACAGACAAATTAAC ACATAG

Coding sequence (CDS) from alignment at Sc0000086:530420..532025-

>Blg00325.0 ID=Blg00325.0|Name=Blg00325.0|organism=Branchiostoma lanceolatum|type=CDS|length=606bp|location=Sequence derived from alignment at Sc0000086:530420..532025- (Branchiostoma lanceolatum)
ATGGCGTGTAGTGGCGTAAACAAAGTCGGCGCCATTTTGTTCTTCTTACT
ATGTTCAAACGCCACGCCCTTGGTCGTCGCAGCCAGCGTAGCAATAGGTG
GCCAGATCCAGGTCACAGTGGGGCTGGGACAACATGTCCCTCCCGGCGGG
TCAGTCATCCTCCCCTGTAACTACTCCGTACCGTCCGACGACGTCCGGCC
GCTGGTCAGCTGGTGGAAGGACAGAGGGCTGGTACTGACCAGACGGATCG
TGTACGAGCACCAGGAGGGCCGGTTCAGTAAGGCGTATGACGAGTGGGCG
GGGAGGACGGCCCTCCTCAGACAGGCGTCCCTACAGATGACCAACCTGAC
CACAAACGACACGGGGAAGTACGAGTGTGAGATCAGGGTCCCTCTCAAGT
ACGGGGCAGCCCGGGGGTTCATCAACCTGGACGTCGATGTTTCTGGAGGT
AAAAATAACCCTTCGTACAAACTCAGAACAGGACTCGTTGTTGGAGTGGC
TCTTGGAGTAGGGCTCATATCAGTCATAGCCGCGATACTGGTTCTCACAC
TGCGCAAGAGGAAAATCACGACTGAGGCACAATATAACAGACAAATTAAC
ACATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00325.0Blg00325.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00325.0-exon-Sc0000086-1570713199:531944..532025Blg00325.0-exon-Sc0000086-1570713199:531944..532025Branchiostoma lanceolatumexon
Blg00325.0-exon-Sc0000086-1570713199:531030..531395Blg00325.0-exon-Sc0000086-1570713199:531030..531395Branchiostoma lanceolatumexon
Blg00325.0-exon-Sc0000086-1570713199:530671..530703Blg00325.0-exon-Sc0000086-1570713199:530671..530703Branchiostoma lanceolatumexon
Blg00325.0-exon-Sc0000086-1570713199:530420..530544Blg00325.0-exon-Sc0000086-1570713199:530420..530544Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:530420..532025 -
Properties
Property NameValue
GeneIDBlg00325