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Blg00322.0 (mRNA) - B. lanceolatum

Overview
NameBlg00322.0
Unique NameBlg00322.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:248952..252104-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00322.0 ID=Blg00322.0|Name=Blg00322.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3153bp|location=Sequence derived from alignment at Sc0000086:248952..252104- (Branchiostoma lanceolatum)
ATGCCCTATACAAGAGCTCAAAAACAGAAACAAGAGAAGGAAAATACACC AAACAAGGGGCCAACTTACCCAGCTGTGATCAGCGACCAAGTNGACGGAA TCATAAGCACGAAGACCATCACCAAGCACAGCAAAGGACACTGGAATGCA GCACTTGAACAACAAATGAAGACCACAAAAACAGCCCTACGAAAATTTCA CAGAAGAAGAGACACTCACAACCTCAACAAATACCTAAAAGAGAAAGAAA CGCTCACCCTCATGGAAGAAGACGAACAGAACAAACACTGGCAAGCACAG CTTAAAAGTATGGACCCAAGGAGACCACAAGGTTTCTGGAAGACTATCAA AACACACCTAAACAAGAACACAAAGACCGTCATACAGCCCCTGAACCTAC CCAACGGAGACATAGCCACCACAGACGAAGACATTGCACAAATAGCCACA GAGACATACGCCCCTAGCGGAGTAGACATGTCTGGAGACCTCAGCCACTG GAAAGACAACGTCACACATGCAGTCCATGCAGTCATAGATCACCAGACAG ATGCAATCAAGAACAACGACCAACAAGACGAGCAACATGACGACCCCTTA AATGCAGACCTCCAGCTGGGGGAAATCCAAGCTGCTATCAATAAGATGAA TGCCAACTCTGCACCCAGTCCTGCGGAGGGGATCCTCCCTATCATGATCA AAAGAGCAGGTGAAGGACTGACGGAAGCTCTACTACACATGTTTCAGTGT ATATGGAAGCAAGGAGAGCTACCAAAACAAATGAAACAAGATACCAAAGT TCTGATCCGAAAGCCCGGCAAAGACAACTACAACCTGATCAAATCATACC GGCCCATCACCCTCTCCAGTGTAATAGGCAAAATCCTGGAACGGGTAGTC AACAACCGCCTTACGTGGTGGACAGAGGTAAACAACCACCTTGCACCTAC TCAAGAAGCCTACAGAAGACACAGAAGTGCACCTCACGGAGTCCTCAGAC TAACACAAAACATACAAGAAGGATGGAAGCTAAACCAAACTACCGTTGCT GTATTTGCAGACTACGAGGCCTGCTTCGACCGAGTATGGCAGGAAGGCCT GCTATACAAGCTTATCAACAAAGGAGTGAAAGGCAGGATGCTATGCTATC TTAGCTCCTTCCTCAAAGACCGGGAAGCCACCTACAAGATCAACACCATT ACCACACAACCACAGCTGAGCAAAGTTGGAATACCACAAGGAGCCGTCCT CTCTACAACCCTCTGCAACCTGTACACAGCCGATGCATACTCTGACGTCA ACCTCGACAATTTCCAGTACGCAGACGATGCCGCAGCCTGGAAGACCGGA GAAGACGTCCAAGCAGTGAGGAAATGCGTAGAAGAAGGGATCTCTAAAGT GATGCTAAACTGGTGCCCACAATGGAACATGAAGGTTGAGCCGAGCAAAA CCAAAGCCATGATCTTCCCCCCTCCACATGCAGACAACACTACTGAGGAC TTGAAAGTTGACAACAAGAACATACAACTGGTAGATGACTTCAAGCTGGT AGGAGTAACCCTGGACCAACAACTCACCTTCAGCAAACACATCACAACAA CGCGGACAAAAGCATTCAAGGCCCTGAAAGCCGTAAGCAAAGTCACACAA GCCAAGAAGAATCCAAACCAACAAGCCCACATCCTGCTATACACAACACT GGTCAGACCCATCCTAGACTATGCTTCGGAATGCACAATCACAGCCAAAG ACAAACTGGAGAAGGCCTACTCGCCCATACAAAGACAAGCACTGATAGCA GCAACCGGGTGCCTCGAAAGAACAAGCAATGAAGCCCTGGAGACATTGAC AGGAATCCCACCGATCGACATCCACCTCAGTTGCAGACAAGCCCAGGCGT ACCTGAGAATGACCTCAAAACACACAGGAAACCCCATCTACGACACCATA TCTCACATGAAGACTCAAAAAACAACAACCCAGACAGGATCCCCGCTCCA CCTACTCCAGACAAGACTCAACGAGCTGAAAGAAGAGATGGATGAAACCA CCGTAGACAAAGAACCATACTACGACGCCAGACTCCCCCCTTTCACCATG GGCAGTATAACTGGAACATTCGCAACAACAACTAACACCACAGGGGGAAA AGACAAGGCACGAGAAGATATCCTGGACACTCTACAACACATCTCAAACA GCAAGGAACCAACAACCGTCATTTTCACAGATGGCTCAGCCCTAGGAAAC CCAGGGCCCACAGGGTGTGCTGCAGTCATCTATGAAAGATGGGGAGTCAC TGAACCTTTCGCAGTACGCAAATCTGTAGCAGCCAAATCTAACAACTATG AAGGGGAACTTGAAGGCCTTCACCTGGCCATCAACACAATCACCAGAAGA CAAACCACAATCACTACATCTAAGGTACTCGTACTCTGCGACTGCAAGGC TGCGGTGGAGAGCGTCATGGGAGTACAGCAAGTGGACGCCTACAACAGCC TGGTACACACCATCCGAAACAAACTACGAGCACTCAAACTTCAAGGCCTC ACCATACAGATCATCTGGTGCCCGGGACACATGGGGATCCCTGGAAATGA GATTGCAGACAAGGAAGCCAAACTGGCAGCAGACGAAGCTACAAACATCC AATACACATCTTGGACAAAACATCAAGCCATGAAGCACATTGAAGCACAA GCACATGAGAGATGGAACAGAAGGATGAAGCTGAACATGAGAAGTGAACA CATGCAGAAAATCGCCACTAACATGAAGAAAAAAGGCAGGACACATGGAA GAAGAAACACACAAGTAAACATCAATCAGCTAGTGAGTGGCCACACCAGA CTCAACGCCTACCAAAACTGGAAGAACCCAGAGGTCTCACCAAACTGCCC AAACTGCGGTGCTCTGGAGACCACCAGACACTACCTGTACCACTGCCCTC GGTACGAAAAGGAAAGACAACACATGCTGCTAGAAGCTGAGAACTTATAC GAGACATACAACATTGCAGAGGAATGCAGAGACACGGATATCGTCACTCT AGCCGGGATGAGAGAAGACCTCCCTGAGACAATCAACAAGCAGATGTACT TAGCTCTCTCCCGGTACATTGAGAGCACGCACAGACTCGATGTGCTCTCC TAG

Coding sequence (CDS) from alignment at Sc0000086:248952..252104-

>Blg00322.0 ID=Blg00322.0|Name=Blg00322.0|organism=Branchiostoma lanceolatum|type=CDS|length=3153bp|location=Sequence derived from alignment at Sc0000086:248952..252104- (Branchiostoma lanceolatum)
ATGCCCTATACAAGAGCTCAAAAACAGAAACAAGAGAAGGAAAATACACC
AAACAAGGGGCCAACTTACCCAGCTGTGATCAGCGACCAAGTNGACGGAA
TCATAAGCACGAAGACCATCACCAAGCACAGCAAAGGACACTGGAATGCA
GCACTTGAACAACAAATGAAGACCACAAAAACAGCCCTACGAAAATTTCA
CAGAAGAAGAGACACTCACAACCTCAACAAATACCTAAAAGAGAAAGAAA
CGCTCACCCTCATGGAAGAAGACGAACAGAACAAACACTGGCAAGCACAG
CTTAAAAGTATGGACCCAAGGAGACCACAAGGTTTCTGGAAGACTATCAA
AACACACCTAAACAAGAACACAAAGACCGTCATACAGCCCCTGAACCTAC
CCAACGGAGACATAGCCACCACAGACGAAGACATTGCACAAATAGCCACA
GAGACATACGCCCCTAGCGGAGTAGACATGTCTGGAGACCTCAGCCACTG
GAAAGACAACGTCACACATGCAGTCCATGCAGTCATAGATCACCAGACAG
ATGCAATCAAGAACAACGACCAACAAGACGAGCAACATGACGACCCCTTA
AATGCAGACCTCCAGCTGGGGGAAATCCAAGCTGCTATCAATAAGATGAA
TGCCAACTCTGCACCCAGTCCTGCGGAGGGGATCCTCCCTATCATGATCA
AAAGAGCAGGTGAAGGACTGACGGAAGCTCTACTACACATGTTTCAGTGT
ATATGGAAGCAAGGAGAGCTACCAAAACAAATGAAACAAGATACCAAAGT
TCTGATCCGAAAGCCCGGCAAAGACAACTACAACCTGATCAAATCATACC
GGCCCATCACCCTCTCCAGTGTAATAGGCAAAATCCTGGAACGGGTAGTC
AACAACCGCCTTACGTGGTGGACAGAGGTAAACAACCACCTTGCACCTAC
TCAAGAAGCCTACAGAAGACACAGAAGTGCACCTCACGGAGTCCTCAGAC
TAACACAAAACATACAAGAAGGATGGAAGCTAAACCAAACTACCGTTGCT
GTATTTGCAGACTACGAGGCCTGCTTCGACCGAGTATGGCAGGAAGGCCT
GCTATACAAGCTTATCAACAAAGGAGTGAAAGGCAGGATGCTATGCTATC
TTAGCTCCTTCCTCAAAGACCGGGAAGCCACCTACAAGATCAACACCATT
ACCACACAACCACAGCTGAGCAAAGTTGGAATACCACAAGGAGCCGTCCT
CTCTACAACCCTCTGCAACCTGTACACAGCCGATGCATACTCTGACGTCA
ACCTCGACAATTTCCAGTACGCAGACGATGCCGCAGCCTGGAAGACCGGA
GAAGACGTCCAAGCAGTGAGGAAATGCGTAGAAGAAGGGATCTCTAAAGT
GATGCTAAACTGGTGCCCACAATGGAACATGAAGGTTGAGCCGAGCAAAA
CCAAAGCCATGATCTTCCCCCCTCCACATGCAGACAACACTACTGAGGAC
TTGAAAGTTGACAACAAGAACATACAACTGGTAGATGACTTCAAGCTGGT
AGGAGTAACCCTGGACCAACAACTCACCTTCAGCAAACACATCACAACAA
CGCGGACAAAAGCATTCAAGGCCCTGAAAGCCGTAAGCAAAGTCACACAA
GCCAAGAAGAATCCAAACCAACAAGCCCACATCCTGCTATACACAACACT
GGTCAGACCCATCCTAGACTATGCTTCGGAATGCACAATCACAGCCAAAG
ACAAACTGGAGAAGGCCTACTCGCCCATACAAAGACAAGCACTGATAGCA
GCAACCGGGTGCCTCGAAAGAACAAGCAATGAAGCCCTGGAGACATTGAC
AGGAATCCCACCGATCGACATCCACCTCAGTTGCAGACAAGCCCAGGCGT
ACCTGAGAATGACCTCAAAACACACAGGAAACCCCATCTACGACACCATA
TCTCACATGAAGACTCAAAAAACAACAACCCAGACAGGATCCCCGCTCCA
CCTACTCCAGACAAGACTCAACGAGCTGAAAGAAGAGATGGATGAAACCA
CCGTAGACAAAGAACCATACTACGACGCCAGACTCCCCCCTTTCACCATG
GGCAGTATAACTGGAACATTCGCAACAACAACTAACACCACAGGGGGAAA
AGACAAGGCACGAGAAGATATCCTGGACACTCTACAACACATCTCAAACA
GCAAGGAACCAACAACCGTCATTTTCACAGATGGCTCAGCCCTAGGAAAC
CCAGGGCCCACAGGGTGTGCTGCAGTCATCTATGAAAGATGGGGAGTCAC
TGAACCTTTCGCAGTACGCAAATCTGTAGCAGCCAAATCTAACAACTATG
AAGGGGAACTTGAAGGCCTTCACCTGGCCATCAACACAATCACCAGAAGA
CAAACCACAATCACTACATCTAAGGTACTCGTACTCTGCGACTGCAAGGC
TGCGGTGGAGAGCGTCATGGGAGTACAGCAAGTGGACGCCTACAACAGCC
TGGTACACACCATCCGAAACAAACTACGAGCACTCAAACTTCAAGGCCTC
ACCATACAGATCATCTGGTGCCCGGGACACATGGGGATCCCTGGAAATGA
GATTGCAGACAAGGAAGCCAAACTGGCAGCAGACGAAGCTACAAACATCC
AATACACATCTTGGACAAAACATCAAGCCATGAAGCACATTGAAGCACAA
GCACATGAGAGATGGAACAGAAGGATGAAGCTGAACATGAGAAGTGAACA
CATGCAGAAAATCGCCACTAACATGAAGAAAAAAGGCAGGACACATGGAA
GAAGAAACACACAAGTAAACATCAATCAGCTAGTGAGTGGCCACACCAGA
CTCAACGCCTACCAAAACTGGAAGAACCCAGAGGTCTCACCAAACTGCCC
AAACTGCGGTGCTCTGGAGACCACCAGACACTACCTGTACCACTGCCCTC
GGTACGAAAAGGAAAGACAACACATGCTGCTAGAAGCTGAGAACTTATAC
GAGACATACAACATTGCAGAGGAATGCAGAGACACGGATATCGTCACTCT
AGCCGGGATGAGAGAAGACCTCCCTGAGACAATCAACAAGCAGATGTACT
TAGCTCTCTCCCGGTACATTGAGAGCACGCACAGACTCGATGTGCTCTCC
TAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00322.0-exon-Sc0000086-1570713199:248952..252104Blg00322.0-exon-Sc0000086-1570713199:248952..252104Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00322.0Blg00322.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:248952..252104 -
Properties
Property NameValue
GeneIDBlg00322