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Blg00321.5 (mRNA) - B. lanceolatum

Overview
NameBlg00321.5
Unique NameBlg00321.5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:72093..73963+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00321.5 ID=Blg00321.5|Name=Blg00321.5|organism=Branchiostoma lanceolatum|type=mRNA|length=1871bp|location=Sequence derived from alignment at Sc0000086:72093..73963+ (Branchiostoma lanceolatum)
CAACCAATCAAGCAAGGAAGCAATTAATTCTATTCCCACAGAAAAACGAA ATGGAGGTCGGAAGGCTGATCAACTACTCCCCGGAGCGGTACCTGGCATG TATGAGGGCCTTACGAGCTGCGTACGGTAATGACCAAATTAACAGAGACC CCGCCTACTGCCAGTCCTTTGGAGCAAAACTTCCCGACTCTACCCTGTGT GCGCCGGGAACCGACGTGCGTGTGTTGGGGATAGGGAGTGGATCAGGTGA GACCGCCATGTCGACCATATTCCGGATACGGACTTATGGGTAACGCAGGC CGGCAAGCTACACATTACCATGGTTATAATGTCATAATGACGTCTGTGTG GCGCATGCACACTGTGTGGCCCAGAGTTATCCATTTTCCCAATGTACGGG CGAACGGATCCGTAACATGGTCCATGTTAACAATGTGTGCATCTAAGGGC ACGGGGGTTCTTCAGCGCTGGTTGCCACATCCACAGGAACAAAATGGAAA TGATCCGTTATCTAACATTGAATTATCACTTGAACATTGAACCTTGAACC ATTTTGTTTTCTCACAGGAGATGTTGACAGTGCCATTCTAAAGAAGCTTC TACAACGTCATAACAGTGTGTTCAACAGGGTTGTGGAACCGTCGGAGGAA ATGATCGAGTTATACAAGGTGGAAACTGTCTGCGTTTTCAATCTTTTAGG AATGGTGAATCCTTTTTCAGTTTTGGTCCATGCTTTCATTTTGTTATTCG TTGAATTCATTTCACGTCAGACGCTATGGTTAGTATTATTGATATTCATA TTGTTGTAGGCAGGGGTAAGCGAAGACACGAGTCTCGGTGCTGTGAAGTT TGACTGGCGCCAGCAGACAGCAGAAGAGTACTTCCAGACGAAAGATCCGA AGGACACCAAGTTCCACCTGATCCATGCAATCCACGTTCTGTACCATGTG GAAGACCTTCACGCCACCTTGCGGGACATGTGGGAACAGCTTGCAGATGG TGGTTACATGTTAATCGCCATTAAGTCAGGTAACTAAATGAGCAGCTTTC ATGTTGTTTTGAAGGGCGGAGCCTATTCTACAGTATACGTATTTTGACCG TTTTAGAAATATTCATTACTTCTTCCCCCTATTCAGGGAGCATAAAGTTT GTGCCAAAGGTGCCATTTCGCTCGGCGGTCCCCCGAAGTCTTACCTAACC TTAGCACCTTAGTTCCTTCCGTGCCTTAAATCAACCAGTGCCTCTTATAC ATCTACAGGCAAGGATGCTGGTGCGAAGCTGTGGTACAAGTTGTGGGAGG AGTTCGGCCGAGGCGACCGTCTGGAGACGTCACTTCGTACGTCCGATGAC GTCAAACACTGGCTTGACGCAAAGGGCATCAGCTACGTCAGCTCAGAGGA AGATGGATTTGCATTCAATATTAACATTTCAGAGTGTTTTAATGAAGAAT CAGAAGAAGGAAGGAAGATTCTCGACTTCTTAACACAAACGCCTCACGTA TCCAGTATGCCAGAAATAAGATCAATGGCTTTGGAGTACCTGCGACGTAA TTCAACCGGGGTTGACGGAAAGATTATTCACAAAAGAAAATTCGAAGTTA TTCTCGCTTCCAAAAAAGGCGAGTAAACATACAAAATTCGACTCGTTCAT CGGTCGGACCATACAGATTGTCCCTTTAATCAAGCTTATACTCTTTCTTA TACACCCTACAGTTGCCTGAATGTGTGGTACATGGGTGGTACGTTTGTAT CTTAATAAGAGATATTCCTTAAGGCAAAGGAGACTGAAATTGTCCATCAT GTGTATACATAGAGGCGAATACCCTGAGGGTACACAAGGCTGTAGGAAAA AAAAATCTATGTGCGTGTTAA

Coding sequence (CDS) from alignment at Sc0000086:72093..73963+

>Blg00321.5 ID=Blg00321.5|Name=Blg00321.5|organism=Branchiostoma lanceolatum|type=CDS|length=885bp|location=Sequence derived from alignment at Sc0000086:72093..73963+ (Branchiostoma lanceolatum)
ATGGAGGTCGGAAGGCTGATCAACTACTCCCCGGAGCGGTACCTGGCATG
TATGAGGGCCTTACGAGCTGCGTACGGTAATGACCAAATTAACAGAGACC
CCGCCTACTGCCAGTCCTTTGGAGCAAAACTTCCCGACTCTACCCTGTGT
GCGCCGGGAACCGACGTGCGTGTGTTGGGGATAGGGAGTGGATCAGGAGA
TGTTGACAGTGCCATTCTAAAGAAGCTTCTACAACGTCATAACAGTGTGT
TCAACAGGGTTGTGGAACCGTCGGAGGAAATGATCGAGTTATACAAGGCA
GGGGTAAGCGAAGACACGAGTCTCGGTGCTGTGAAGTTTGACTGGCGCCA
GCAGACAGCAGAAGAGTACTTCCAGACGAAAGATCCGAAGGACACCAAGT
TCCACCTGATCCATGCAATCCACGTTCTGTACCATGTGGAAGACCTTCAC
GCCACCTTGCGGGACATGTGGGAACAGCTTGCAGATGGTGGTTACATGTT
AATCGCCATTAAGTCAGGCAAGGATGCTGGTGCGAAGCTGTGGTACAAGT
TGTGGGAGGAGTTCGGCCGAGGCGACCGTCTGGAGACGTCACTTCGTACG
TCCGATGACGTCAAACACTGGCTTGACGCAAAGGGCATCAGCTACGTCAG
CTCAGAGGAAGATGGATTTGCATTCAATATTAACATTTCAGAGTGTTTTA
ATGAAGAATCAGAAGAAGGAAGGAAGATTCTCGACTTCTTAACACAAACG
CCTCACGTATCCAGTATGCCAGAAATAAGATCAATGGCTTTGGAGTACCT
GCGACGTAATTCAACCGGGGTTGACGGAAAGATTATTCACAAAAGAAAAT
TCGAAGTTATTCTCGCTTCCAAAAAAGGCGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00321.5Blg00321.5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00321.5-exon-Sc0000086-1570713199:72093..72338Blg00321.5-exon-Sc0000086-1570713199:72093..72338Branchiostoma lanceolatumexon
Blg00321.5-exon-Sc0000086-1570713199:72660..72760Blg00321.5-exon-Sc0000086-1570713199:72660..72760Branchiostoma lanceolatumexon
Blg00321.5-exon-Sc0000086-1570713199:72902..73121Blg00321.5-exon-Sc0000086-1570713199:72902..73121Branchiostoma lanceolatumexon
Blg00321.5-exon-Sc0000086-1570713199:73351..73963Blg00321.5-exon-Sc0000086-1570713199:73351..73963Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:72093..73963 +
Properties
Property NameValue
GeneIDBlg00321