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Blg00321.4 (mRNA) - B. lanceolatum

Overview
NameBlg00321.4
Unique NameBlg00321.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:66657..74450+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00321.4 ID=Blg00321.4|Name=Blg00321.4|organism=Branchiostoma lanceolatum|type=mRNA|length=7794bp|location=Sequence derived from alignment at Sc0000086:66657..74450+ (Branchiostoma lanceolatum)
CCCCATCCGAACTCTGACCTCTGGGTGATCCCGGCTTGCTACTGTCATCA AAATAACTGTAGCAAGCCGGAATCATCCCGAGGTCAGAGTTCGGATGGGG CCTAAATCAGGTTCACCCGGACGGGCCCCATTCAGAATGTGACAGAGGCA TAACTAATCCACCTCAGGTGTTTCTCAAGATGGCCACCAATAAGCGATAC TGCCACACGCCCCTTTGTTATAGCTAGTTGTCTGACCTAGGTGCTAAGGG AACCAATCATTTCCCTGGGGCTATGATTACTTTGCATACCTGCAGACAGC AGTTTGGAAGGATTTCGAGGTCTGATTCTCCTGTCTGGTATCCAACCGTG TGCAGCTTACGTCCGTTTCCCTTGCTTCTATACTCGTCTAGCACAGTAGC GACACAATAAACCCAAGGTAATCTGCATGTGTTGTTTAATGTTAGACATT CATGTAGTAAGATAAGCAGGATAGCACTAAGTTACTCAAATAACAGGATA GATTTTGGAAACGGTCAGACGTTGTTGTCTTTCGTCAGTGACTGAACCAG AATGTGGAGGTCTTGTCCAAAACTAGAGAGATTGTCTCTTACCAGATTAC CCAACCTCTACGTAAACTGGTCCTGTACGTAAGCTGACCTGGTATTCTAA ACATTTTTTTTCAACTTCAGTTACCCCCAAATAACCACGGCACGAAATCC GGTATTTAAGCATGCTTAAACGCAGCGTAAACGTGACGTTTATTCACTAT TTCCGCAACTTAACGACCCCTATACGTCTGCTTAAAGATTGCATTTAAGG TGTCCTTTCCGGAAGTGCGTTAATGTACGTATTGGCACTCATTCACGTGT ATTTACGTAACTTTTCGACACGTAAAGGCGTCGTTGTGGACAATCTTTCC GTACATTTACGGAAGATCCAACACGAAAAGTATGCGTTTCTTGAGTCCTT TCCGTAACCTTTCGTCCATGTTTATAATCCGTTTTCGTCACGATTTTCTC TACGTTTATGTGCCGTTCACGCAGCCTGAAAGGCAACTTAAAATCATACC TTTCCTCGGTATTTCCGTGACCTTTTAACGACCTTAACGTGCTACAAACG TGGTATCTGCAAGGCGTTAAGGCGTCGTTATGGACAATCTTTCCGTACCT TTACGGAAGATCCAACACGGAAAGTGTAAGTTTCTTGAGACCTTTCCGTA ATCTTTCGTCCATCTTTATAATCTATTTCCGTTACGATTTCCTTACGTTT ATGTGCCGTTCACGCAGCCTGAAAGACTACCTAAAGCTATACCTTTCCTA GTGTTTTCCGTTGCCTTTTTATGAGCTTAACGTGCTAAAAACACGAGCTA AACGTGCTAAAAACACGAGCTTAACGTGCTAAAACGTAGTCTCTACAATA AGTTTCCTTTTCATTATACAGTATCTAATTTGATCCTTTACTTAACTTGC TACGGATGGCTTAACCATTCCGAACCCTTACATATACAGGTAAATATGGA TATGAAAGGCAACAGGGCCGGTAAAAGTTTAGAACAATTTATTTGAAAGA TGATAACACTGCACAAAAACATGTTACGCCATTATAGCGAGACCCCTCCC CACCTTAACGAATATACACATACAAAATGGAATAAATGATTTCTTACATG GACAGCTAGTTTCATTTAAAAAAATGTCACCTTATCATTGATAAACTATT CAGGCTATTCCTTACTCCAACTACTAACTATTACAATGTGCTTCCAAGTT TTAACAGATCAGTAGATCTGAGATGTCCCCTGGTTAAATAAATAAATTGA AATTGAAATTGAAAACCCTAGCCAAGGAATGTCCTTGCCCTAGCTAACTA TTACATCAACACCAAAACGTAAACTCTAACACTAACTGACCCTACGTCTA ACTTTTCTTCCCTCCCGTGTCTTATTAGCCTTTACCAGACTCCGCGGATC GCTAGGAAAATAGTAGAAATTGGCCAAATAGAGTGAATTGTAACAGTACA ATCATTCTGGGTTGAATAACACTTACTAGGTACTTGCGGTTACGTCATCG GTCGTCATATTCTAACTTGTACTTGACGCGGTCAACGAGGGATCAATCTC ACATTGTCGGTAGATTCTCCCTTCACCATTTTGCGACATTTCCAAGTCCA CGATTCCGGTCCCAGTGTTGGGCGAGACGACAGGGATAGTTCCTATCAAG ACAGGTAGACAGGTTCCGATTTCACTCACGCTAATCTCCAAGCAGATCTA TAGGTTGCATCAAGACCGTATCAAACTGGCAGAGAAAGTACTTGGATTGC TATACATACAAGCTCCTTCTTCCAGTTGGATACGGTCTTTGCAATACATT GGGCCTGGTTGGAGGCCAACTCACGCCGTTGTCTCCACTGGTACCGGGTG GATTTGGAGATACAACGAAGTCCCGAATCGCGTGCCCGCATGCTCTGTGC AGCATCTCCACCCTCCTTGGTTTCACCCAGGAAGTATAATCCTATGAAAC CTCCTTGGTTTCACCAAGTAGTACAGGTCAGTGTCTTTGTCCCAGCTTTA CGTTTTTCCGTCGGGGTTCCGGGTGGTAAGAACAACGTTGTGGCCATAAC TTGTGGGTTGAAACGACTGAGTTCAAACTTCCTTCATGAGCTGTCTTCGC TGTAAAAAAATAACTGTCTCTGGGATATACGGTTAATTTGAAAAAGCCAC CCTTTTCTCTGATTGGGTAATGCCCTGTCACATGGCATTCCACTAGTAAA TATGGAGATGTTGCATTACCATCTCAACGTACCGCCCCAGCTTGTTTACG ACTTCACACTGTATAAATTTGCAGTTGAAAAGCAGACGTCCTTGCGTTTC GCTTTTGCCCCGAACACAACAACTGACCCGAGCGACAATAGAAAATACTG TTAGTGGCGATCTTTCTAGAAGTTACTTGTAGATTATAAAAAGGAAAACT GCGTGAGAACAGGCGTTATTCGATGATTTTTGATACAAAAAAAGGAACAA ATACACAAAGCTGCCAAAACGTGCCGGCGGCGCGGTCTCGATCCGCGGAC TGAGCCAATTTGTGCGGCGGCCAAAGACAGTATGCCCGCCGACCTATAGA TTTTCAATCCGGGGGAGTTGTTAGCTCAATGTTCCGCGTTGTTTTCTAAA ACTGAGAGCACCGTCAACCCGGCCTAAAGGTAACAGAAGGTTAACGGAAA GGTAAAAATAACGGCGAGGATAAACGCTCGCTTTCAGACAGCTTTTCTCT ACCTAAACATAAGAGTGGGTTATGTAAACTGAGCCTATATGTAACGAAAA GGTAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCTTTTCTC TACCTAAACATAAAAGGGAGGAGGTTTCCCCCCTTCTAAGTAAACCGAGC CTAAAGGTAACGGAAGGATGTCGGAAAGGTAGAAATAACTGCGAGGGAAA ACGCCCGCTTTCCGACAGCTTTTCTCTACCTAAACAGAAGAGGGGGATGT CTCCCCCCTTATATGCAAACCGAGCCTAAAGGTAACGGAAGGATATTAGA AAGGTAAAAATAACTGCGAGGGAAAACGCCCGCTTTCCGGTAGCTTTTCT CTACCTAAACATAAGAGTAGGTTATGTAAACAAAACCTATATGCAACGGA AGGATATCGGAAAGATAGAAATAACTGCGAGGGAAAACGCCCGCTTTCCG GCAGCTTTTCTCTACCTAAACATAANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAAATAAC TGCGAGGGAAAACGCCCGCTTTCCGACAGCTGTTCTCTACCTAAACACAA AAGGGGGGAGGTCCCCCCCTTCTATGCAAACATAACTTATATGTAACGGA AGGATATCGGAAAGGTAGAAATAACTGCGAGGGAAAACGTCCGCTTTCCG GCAGCTTTTCTCTACCTAAACATAAAAGGGGGGAGGGCTCCCCCCTTCTA TGTAAACCGAGCCTATATGTAACGGAAGGATGTCGGAAAGGTAGAAATAA CTGCGAGGGAAAACGCTCGGTTTCCGACAGCTTTTCTCTACCTAAACATA AAAGGGGGGGAGGTTTCCTCCTTTCTAAGTAAACCGCGCCTAACGGTAAC GGAAGGATGTCGGAAAGGTAGAAATAACTGCGAGGGAAAACTTCCGCTTT CCGACAGCTTTTCTCTACCTAAACATAAAAGGGGGGAGAGATACCTTAGA ATATAACTGCTGTTTTTTGTAAGCTGTAGCATAAACAAGGATAAAAGAAG ATCAGCTCGAAGATAGGTATGGACTGTATGTCTAATTTTGCTACAAAGTA GACGTACAATGTGCGTGCACATGCATGGTGCGTTGTTTAAAAAAGAAACT TATGAGAAATGCGGGATCGGTGTTTAGGTGTTTACTGGAAATGGGTGTAT CTTAAAGATCGAAGACCGTTTCGGGTATACCAGCTTTTCTCCAAGATTTT AGAAATTGAGGCACTATTCGTCCTCAGGAGAGAATATATCTGCTTGGAGA ATATATTGGTTACTGATGTACCATAATGTTTCATCTATACGATGTATATA AGGATGCTTAAAGTCCATGGAAAGATATAGCATGCATTTAATTCATGTTA ACGAACGCGGAAAGGTTGCGGAAAGCTCAGATCTTACTTTCAGCGACATT AACGACCCCGTAAACTCTGCTTAAATATTTCCCGACCTTTAATTTTTGTT TCCGTCATTCGGAAAGTTTGCTTAAATATTCGATTTCGTGCTGTGAACCC CGCTGGGGCAAAGTAGGGGGAAGGAGGTCCCAGGCTAAGGCGGGCAGGCC TCCAGCCAACATCATACGCCTTCACTGAATAGCCAGGCATCATTGAAAAT AAGCTAGTTCAGAGTTGCTACTACGCATGTGCAGTGTCAAAGGTGAAGGC CCCCGGCTTGAAAACAGTGCTCGTCCCGACATTGTCTTGATTTGCATAAC AACGCCCCGCCGGGTTTTGTTCACGTCTCGGGGGCCTTCACCTTTGACAT TGCACATGCGTAGTAGCAACTCCGAACTAGCTTATCGTCAAATTGATATA TACGTTAATTTCTTTATCTATTTATTGATTTTGAACACAATTAGGTAGTC CCCCCAGTCAAGCTAGACTGACTTCCAAGGAAACCCAAATACACAAAGTT CAAGCATAGGTGTAAATAAATAGTACACAAGTCAACCAACCAATCAAGCA AGGAAGCAATTAATTCTATTCCCACAGAAAAACGAAATGGAGGTCGGAAG GCTGATCAACTACTCCCCGGAGCGGTACCTGGCATGTATGAGGGCCTTAC GAGCTGCGTACGGTAATGACCAAATTAACAGAGACCCCGCCTACTGCCAG TCCTTTGGAGCAAAACTTCCCGACTCTACCCTGTGTGCGCCGGGAACCGA CGTGCGTGTGTTGGGGATAGGGAGTGGATCAGGTGAGACCGCCATGTCGA CCATATTCCGGATACGGACTTATGGGTAACGCAGGCCGGCAAGCTACACA TTACCATGGTTATAATGTCATAATGACGTCTGTGTGGCGCATGCACACTG TGTGGCCCAGAGTTATCCATTTTCCCAATGTACGGGCGAACGGATCCGTA ACATGGTCCATGTTAACAATGTGTGCATCTAAGGGCACGGGGGTTCTTCA GCGCTGGTTGCCACATCCACAGGAACAAAATGGAAATGATCCGTTATCTA ACATTGAATTATCACTTGAACATTGAACCTTGAACCATTTTGTTTTCTCA CAGGAGATGTTGACAGTGCCATTCTAAAGAAGCTTCTACAACGTCATAAC AGTGTGTTCAACAGGGTTGTGGAACCGTCGGAGGAAATGATCGAGTTATA CAAGGTGGAAACTGTCTGCGTTTTCAATCTTTTAGGAATGGTGAATCCTT TTTCAGTTTTGGTCCATGCTTTCATTTTGTTATTCGTTGAATTCATTTCA CGTCAGACGCTATGGTTAGTATTATTGATATTCATATTGTTGTAGGCAGG GGTAAGCGAAGACACGAGTCTCGGTGCTGTGAAGTTTGACTGGCGCCAGC AGACAGCAGAAGAGTACTTCCAGACGAAAGATCCGAAGGACACCAAGTTC CACCTGATCCATGCAATCCACGTTCTGTACCATGTGGAAGACCTTCACGC CACCTTGCGGGACATGTGGGAACAGCTTGCAGATGGTGGTTACATGTTAA TCGCCATTAAGTCAGGTAACTAAATGAGCAGCTTTCATGTTGTTTTGAAG GGCGGAGCCTATTCTACAGTATACGTATTTTGACCGTTTTAGAAATATTC ATTACTTCTTCCCCCTATTCAGGGAGCATAAAGTTTGTGCCAAAGGTGCC ATTTCGCTCGGCGGTCCCCCGAAGTCTTACCTAACCTTAGCACCTTAGTT CCTTCCGTGCCTTAAATCAACCAGTGCCTCTTATACATCTACAGGCAAGG ATGCTGGTGCGAAGCTGTGGTACAAGTTGTGGGAGGAGTTCGGCCGAGGC GACCGTCTGGAGACGTCACTTCGTACGTCCGATGACGTCAAACACTGGCT TGACGCAAAGGGCATCAGCTACGTCAGCTCAGAGGAAGATGGATTTGCAT TCAATATTAACATTTCAGAGTGTTTTAATGAAGAATCAGAAGAAGGAAGG AAGATTCTCGACTTCTTAACACAAACGCCTCACGTATCCAGTATGCCAGA AATAAGATCAATGGCTTTGGAGTACCTGCGACGTAATTCAACCGGGGTTG ACGGAAAGATTATTCACAAAAGAAAATTCGAAGTTATTCTCGCTTCCAAA AAAGGCGAGTAAACATACAAAATTCGACTCGTTCATCGGTCGGACCATAC AGATTGTCCCTTTAATCAAGCTTATACTCTTTCTTATACACCCTACAGTT GCCTGAATGTGTGGTACATGGGTGGTACGTTTGTATCTTAATAAGAGATA TTCCTTAAGGCAAAGGAGACTGAAATTGTCCATCATGTGTATACATAGAG GCGAATACCCTGAGGGTACACAAGGCTGTAGGAAAAAAAAATCTATGTGC GTGTTAAGTTATACAGAATACAGAAAGTCAAACGAATTGTCTGAAAGGGC ATTAGCCATTGTGTCCATTCTTTGCAAACTATGTATCATTTAGGTCTTAA GACCTTACTGTACTGATAATACATTATGCGAACAACGTTTTTTTCAGACC TTTAGGAGGGGTTGCTAGTCGATAACTTGATAATTGTAATGATAATACAC TACCATTTAGTTATCGCATGCCTGTATTCTATACTGAACATAGGTGTCAT TCCAAGAAGGCGCCGCCCTGATATTACGAGTCAGAGTGAGATTGACTAGC CTACGTAGTCGCGCAGCCCCTGGTTTTGACTGTGCTCGAGTTAGTGAAGT GGAGTGACTATGCGTATGTCATTGATGTCCTTGGTACTGAAACAGAGGTC CTGTCAGCTGTCATGTGGGGTCCACACCGTCTCCATGCATGGTGCCTGAC TGGTCAGGCGTTAAGTCACCGTAAATACAGACAAAAAAGTGGGC

Coding sequence (CDS) from alignment at Sc0000086:66657..74450+

>Blg00321.4 ID=Blg00321.4|Name=Blg00321.4|organism=Branchiostoma lanceolatum|type=CDS|length=885bp|location=Sequence derived from alignment at Sc0000086:66657..74450+ (Branchiostoma lanceolatum)
ATGGAGGTCGGAAGGCTGATCAACTACTCCCCGGAGCGGTACCTGGCATG
TATGAGGGCCTTACGAGCTGCGTACGGTAATGACCAAATTAACAGAGACC
CCGCCTACTGCCAGTCCTTTGGAGCAAAACTTCCCGACTCTACCCTGTGT
GCGCCGGGAACCGACGTGCGTGTGTTGGGGATAGGGAGTGGATCAGGAGA
TGTTGACAGTGCCATTCTAAAGAAGCTTCTACAACGTCATAACAGTGTGT
TCAACAGGGTTGTGGAACCGTCGGAGGAAATGATCGAGTTATACAAGGCA
GGGGTAAGCGAAGACACGAGTCTCGGTGCTGTGAAGTTTGACTGGCGCCA
GCAGACAGCAGAAGAGTACTTCCAGACGAAAGATCCGAAGGACACCAAGT
TCCACCTGATCCATGCAATCCACGTTCTGTACCATGTGGAAGACCTTCAC
GCCACCTTGCGGGACATGTGGGAACAGCTTGCAGATGGTGGTTACATGTT
AATCGCCATTAAGTCAGGCAAGGATGCTGGTGCGAAGCTGTGGTACAAGT
TGTGGGAGGAGTTCGGCCGAGGCGACCGTCTGGAGACGTCACTTCGTACG
TCCGATGACGTCAAACACTGGCTTGACGCAAAGGGCATCAGCTACGTCAG
CTCAGAGGAAGATGGATTTGCATTCAATATTAACATTTCAGAGTGTTTTA
ATGAAGAATCAGAAGAAGGAAGGAAGATTCTCGACTTCTTAACACAAACG
CCTCACGTATCCAGTATGCCAGAAATAAGATCAATGGCTTTGGAGTACCT
GCGACGTAATTCAACCGGGGTTGACGGAAAGATTATTCACAAAAGAAAAT
TCGAAGTTATTCTCGCTTCCAAAAAAGGCGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00321.4Blg00321.4-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00321.4-exon-Sc0000086-1570713199:66657..67073Blg00321.4-exon-Sc0000086-1570713199:66657..67073Branchiostoma lanceolatumexon
Blg00321.4-exon-Sc0000086-1570713199:72134..72338Blg00321.4-exon-Sc0000086-1570713199:72134..72338Branchiostoma lanceolatumexon
Blg00321.4-exon-Sc0000086-1570713199:72660..72760Blg00321.4-exon-Sc0000086-1570713199:72660..72760Branchiostoma lanceolatumexon
Blg00321.4-exon-Sc0000086-1570713199:72902..73121Blg00321.4-exon-Sc0000086-1570713199:72902..73121Branchiostoma lanceolatumexon
Blg00321.4-exon-Sc0000086-1570713199:73351..74450Blg00321.4-exon-Sc0000086-1570713199:73351..74450Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:66657..74450 +
Properties
Property NameValue
GeneIDBlg00321