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Blg00321.0 (mRNA) - B. lanceolatum

Overview
NameBlg00321.0
Unique NameBlg00321.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:66931..73963+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00321.0 ID=Blg00321.0|Name=Blg00321.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7033bp|location=Sequence derived from alignment at Sc0000086:66931..73963+ (Branchiostoma lanceolatum)
GATTACTTTGCATACCTGCAGACAGCAGTTTGGAAGGATTTCGAGGTCTG ATTCTCCTGTCTGGTATCCAACCGTGTGCAGCTTACGTCCGTTTCCCTTG CTTCTATACTCGTCTAGCACAGTAGCGACACAATAAACCCAAGGTAATCT GCATGTGTTGTTTAATGTTAGACATTCATGTAGTAAGATAAGCAGGATAG CACTAAGTTACTCAAATAACAGGATAGATTTTGGAAACGGTCAGACGTTG TTGTCTTTCGTCAGTGACTGAACCAGAATGTGGAGGTCTTGTCCAAAACT AGAGAGATTGTCTCTTACCAGATTACCCAACCTCTACGTAAACTGGTCCT GTACGTAAGCTGACCTGGTATTCTAAACATTTTTTTTCAACTTCAGTTAC CCCCAAATAACCACGGCACGAAATCCGGTATTTAAGCATGCTTAAACGCA GCGTAAACGTGACGTTTATTCACTATTTCCGCAACTTAACGACCCCTATA CGTCTGCTTAAAGATTGCATTTAAGGTGTCCTTTCCGGAAGTGCGTTAAT GTACGTATTGGCACTCATTCACGTGTATTTACGTAACTTTTCGACACGTA AAGGCGTCGTTGTGGACAATCTTTCCGTACATTTACGGAAGATCCAACAC GAAAAGTATGCGTTTCTTGAGTCCTTTCCGTAACCTTTCGTCCATGTTTA TAATCCGTTTTCGTCACGATTTTCTCTACGTTTATGTGCCGTTCACGCAG CCTGAAAGGCAACTTAAAATCATACCTTTCCTCGGTATTTCCGTGACCTT TTAACGACCTTAACGTGCTACAAACGTGGTATCTGCAAGGCGTTAAGGCG TCGTTATGGACAATCTTTCCGTACCTTTACGGAAGATCCAACACGGAAAG TGTAAGTTTCTTGAGACCTTTCCGTAATCTTTCGTCCATCTTTATAATCT ATTTCCGTTACGATTTCCTTACGTTTATGTGCCGTTCACGCAGCCTGAAA GACTACCTAAAGCTATACCTTTCCTAGTGTTTTCCGTTGCCTTTTTATGA GCTTAACGTGCTAAAAACACGAGCTAAACGTGCTAAAAACACGAGCTTAA CGTGCTAAAACGTAGTCTCTACAATAAGTTTCCTTTTCATTATACAGTAT CTAATTTGATCCTTTACTTAACTTGCTACGGATGGCTTAACCATTCCGAA CCCTTACATATACAGGTAAATATGGATATGAAAGGCAACAGGGCCGGTAA AAGTTTAGAACAATTTATTTGAAAGATGATAACACTGCACAAAAACATGT TACGCCATTATAGCGAGACCCCTCCCCACCTTAACGAATATACACATACA AAATGGAATAAATGATTTCTTACATGGACAGCTAGTTTCATTTAAAAAAA TGTCACCTTATCATTGATAAACTATTCAGGCTATTCCTTACTCCAACTAC TAACTATTACAATGTGCTTCCAAGTTTTAACAGATCAGTAGATCTGAGAT GTCCCCTGGTTAAATAAATAAATTGAAATTGAAATTGAAAACCCTAGCCA AGGAATGTCCTTGCCCTAGCTAACTATTACATCAACACCAAAACGTAAAC TCTAACACTAACTGACCCTACGTCTAACTTTTCTTCCCTCCCGTGTCTTA TTAGCCTTTACCAGACTCCGCGGATCGCTAGGAAAATAGTAGAAATTGGC CAAATAGAGTGAATTGTAACAGTACAATCATTCTGGGTTGAATAACACTT ACTAGGTACTTGCGGTTACGTCATCGGTCGTCATATTCTAACTTGTACTT GACGCGGTCAACGAGGGATCAATCTCACATTGTCGGTAGATTCTCCCTTC ACCATTTTGCGACATTTCCAAGTCCACGATTCCGGTCCCAGTGTTGGGCG AGACGACAGGGATAGTTCCTATCAAGACAGGTAGACAGGTTCCGATTTCA CTCACGCTAATCTCCAAGCAGATCTATAGGTTGCATCAAGACCGTATCAA ACTGGCAGAGAAAGTACTTGGATTGCTATACATACAAGCTCCTTCTTCCA GTTGGATACGGTCTTTGCAATACATTGGGCCTGGTTGGAGGCCAACTCAC GCCGTTGTCTCCACTGGTACCGGGTGGATTTGGAGATACAACGAAGTCCC GAATCGCGTGCCCGCATGCTCTGTGCAGCATCTCCACCCTCCTTGGTTTC ACCCAGGAAGTATAATCCTATGAAACCTCCTTGGTTTCACCAAGTAGTAC AGGTCAGTGTCTTTGTCCCAGCTTTACGTTTTTCCGTCGGGGTTCCGGGT GGTAAGAACAACGTTGTGGCCATAACTTGTGGGTTGAAACGACTGAGTTC AAACTTCCTTCATGAGCTGTCTTCGCTGTAAAAAAATAACTGTCTCTGGG ATATACGGTTAATTTGAAAAAGCCACCCTTTTCTCTGATTGGGTAATGCC CTGTCACATGGCATTCCACTAGTAAATATGGAGATGTTGCATTACCATCT CAACGTACCGCCCCAGCTTGTTTACGACTTCACACTGTATAAATTTGCAG TTGAAAAGCAGACGTCCTTGCGTTTCGCTTTTGCCCCGAACACAACAACT GACCCGAGCGACAATAGAAAATACTGTTAGTGGCGATCTTTCTAGAAGTT ACTTGTAGATTATAAAAAGGAAAACTGCGTGAGAACAGGCGTTATTCGAT GATTTTTGATACAAAAAAAGGAACAAATACACAAAGCTGCCAAAACGTGC CGGCGGCGCGGTCTCGATCCGCGGACTGAGCCAATTTGTGCGGCGGCCAA AGACAGTATGCCCGCCGACCTATAGATTTTCAATCCGGGGGAGTTGTTAG CTCAATGTTCCGCGTTGTTTTCTAAAACTGAGAGCACCGTCAACCCGGCC TAAAGGTAACAGAAGGTTAACGGAAAGGTAAAAATAACGGCGAGGATAAA CGCTCGCTTTCAGACAGCTTTTCTCTACCTAAACATAAGAGTGGGTTATG TAAACTGAGCCTATATGTAACGAAAAGGTAGAAANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNCAGCTTTTCTCTACCTAAACATAAAAGGGAGGAGG TTTCCCCCCTTCTAAGTAAACCGAGCCTAAAGGTAACGGAAGGATGTCGG AAAGGTAGAAATAACTGCGAGGGAAAACGCCCGCTTTCCGACAGCTTTTC TCTACCTAAACAGAAGAGGGGGATGTCTCCCCCCTTATATGCAAACCGAG CCTAAAGGTAACGGAAGGATATTAGAAAGGTAAAAATAACTGCGAGGGAA AACGCCCGCTTTCCGGTAGCTTTTCTCTACCTAAACATAAGAGTAGGTTA TGTAAACAAAACCTATATGCAACGGAAGGATATCGGAAAGATAGAAATAA CTGCGAGGGAAAACGCCCGCTTTCCGGCAGCTTTTCTCTACCTAAACATA ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTAGAAATAACTGCGAGGGAAAACGCCCGCTTTCC GACAGCTGTTCTCTACCTAAACACAAAAGGGGGGAGGTCCCCCCCTTCTA TGCAAACATAACTTATATGTAACGGAAGGATATCGGAAAGGTAGAAATAA CTGCGAGGGAAAACGTCCGCTTTCCGGCAGCTTTTCTCTACCTAAACATA AAAGGGGGGAGGGCTCCCCCCTTCTATGTAAACCGAGCCTATATGTAACG GAAGGATGTCGGAAAGGTAGAAATAACTGCGAGGGAAAACGCTCGGTTTC CGACAGCTTTTCTCTACCTAAACATAAAAGGGGGGGAGGTTTCCTCCTTT CTAAGTAAACCGCGCCTAACGGTAACGGAAGGATGTCGGAAAGGTAGAAA TAACTGCGAGGGAAAACTTCCGCTTTCCGACAGCTTTTCTCTACCTAAAC ATAAAAGGGGGGAGAGATACCTTAGAATATAACTGCTGTTTTTTGTAAGC TGTAGCATAAACAAGGATAAAAGAAGATCAGCTCGAAGATAGGTATGGAC TGTATGTCTAATTTTGCTACAAAGTAGACGTACAATGTGCGTGCACATGC ATGGTGCGTTGTTTAAAAAAGAAACTTATGAGAAATGCGGGATCGGTGTT TAGGTGTTTACTGGAAATGGGTGTATCTTAAAGATCGAAGACCGTTTCGG GTATACCAGCTTTTCTCCAAGATTTTAGAAATTGAGGCACTATTCGTCCT CAGGAGAGAATATATCTGCTTGGAGAATATATTGGTTACTGATGTACCAT AATGTTTCATCTATACGATGTATATAAGGATGCTTAAAGTCCATGGAAAG ATATAGCATGCATTTAATTCATGTTAACGAACGCGGAAAGGTTGCGGAAA GCTCAGATCTTACTTTCAGCGACATTAACGACCCCGTAAACTCTGCTTAA ATATTTCCCGACCTTTAATTTTTGTTTCCGTCATTCGGAAAGTTTGCTTA AATATTCGATTTCGTGCTGTGAACCCCGCTGGGGCAAAGTAGGGGGAAGG AGGTCCCAGGCTAAGGCGGGCAGGCCTCCAGCCAACATCATACGCCTTCA CTGAATAGCCAGGCATCATTGAAAATAAGCTAGTTCAGAGTTGCTACTAC GCATGTGCAGTGTCAAAGGTGAAGGCCCCCGGCTTGAAAACAGTGCTCGT CCCGACATTGTCTTGATTTGCATAACAACGCCCCGCCGGGTTTTGTTCAC GTCTCGGGGGCCTTCACCTTTGACATTGCACATGCGTAGTAGCAACTCCG AACTAGCTTATCGTCAAATTGATATATACGTTAATTTCTTTATCTATTTA TTGATTTTGAACACAATTAGGTAGTCCCCCCAGTCAAGCTAGACTGACTT CCAAGGAAACCCAAATACACAAAGTTCAAGCATAGGTGTAAATAAATAGT ACACAAGTCAACCAACCAATCAAGCAAGGAAGCAATTAATTCTATTCCCA CAGAAAAACGAAATGGAGGTCGGAAGGCTGATCAACTACTCCCCGGAGCG GTACCTGGCATGTATGAGGGCCTTACGAGCTGCGTACGGTAATGACCAAA TTAACAGAGACCCCGCCTACTGCCAGTCCTTTGGAGCAAAACTTCCCGAC TCTACCCTGTGTGCGCCGGGAACCGACGTGCGTGTGTTGGGGATAGGGAG TGGATCAGGTGAGACCGCCATGTCGACCATATTCCGGATACGGACTTATG GGTAACGCAGGCCGGCAAGCTACACATTACCATGGTTATAATGTCATAAT GACGTCTGTGTGGCGCATGCACACTGTGTGGCCCAGAGTTATCCATTTTC CCAATGTACGGGCGAACGGATCCGTAACATGGTCCATGTTAACAATGTGT GCATCTAAGGGCACGGGGGTTCTTCAGCGCTGGTTGCCACATCCACAGGA ACAAAATGGAAATGATCCGTTATCTAACATTGAATTATCACTTGAACATT GAACCTTGAACCATTTTGTTTTCTCACAGGAGATGTTGACAGTGCCATTC TAAAGAAGCTTCTACAACGTCATAACAGTGTGTTCAACAGGGTTGTGGAA CCGTCGGAGGAAATGATCGAGTTATACAAGGTGGAAACTGTCTGCGTTTT CAATCTTTTAGGAATGGTGAATCCTTTTTCAGTTTTGGTCCATGCTTTCA TTTTGTTATTCGTTGAATTCATTTCACGTCAGACGCTATGGTTAGTATTA TTGATATTCATATTGTTGTAGGCAGGGGTAAGCGAAGACACGAGTCTCGG TGCTGTGAAGTTTGACTGGCGCCAGCAGACAGCAGAAGAGTACTTCCAGA CGAAAGATCCGAAGGACACCAAGTTCCACCTGATCCATGCAATCCACGTT CTGTACCATGTGGAAGACCTTCACGCCACCTTGCGGGACATGTGGGAACA GCTTGCAGATGGTGGTTACATGTTAATCGCCATTAAGTCAGGTAACTAAA TGAGCAGCTTTCATGTTGTTTTGAAGGGCGGAGCCTATTCTACAGTATAC GTATTTTGACCGTTTTAGAAATATTCATTACTTCTTCCCCCTATTCAGGG AGCATAAAGTTTGTGCCAAAGGTGCCATTTCGCTCGGCGGTCCCCCGAAG TCTTACCTAACCTTAGCACCTTAGTTCCTTCCGTGCCTTAAATCAACCAG TGCCTCTTATACATCTACAGGCAAGGATGCTGGTGCGAAGCTGTGGTACA AGTTGTGGGAGGAGTTCGGCCGAGGCGACCGTCTGGAGACGTCACTTCGT ACGTCCGATGACGTCAAACACTGGCTTGACGCAAAGGGCATCAGCTACGT CAGCTCAGAGGAAGATGGATTTGCATTCAATATTAACATTTCAGAGTGTT TTAATGAAGAATCAGAAGAAGGAAGGAAGATTCTCGACTTCTTAACACAA ACGCCTCACGTATCCAGTATGCCAGAAATAAGATCAATGGCTTTGGAGTA CCTGCGACGTAATTCAACCGGGGTTGACGGAAAGATTATTCACAAAAGAA AATTCGAAGTTATTCTCGCTTCCAAAAAAGGCGAGTAAACATACAAAATT CGACTCGTTCATCGGTCGGACCATACAGATTGTCCCTTTAATCAAGCTTA TACTCTTTCTTATACACCCTACAGTTGCCTGAATGTGTGGTACATGGGTG GTACGTTTGTATCTTAATAAGAGATATTCCTTAAGGCAAAGGAGACTGAA ATTGTCCATCATGTGTATACATAGAGGCGAATACCCTGAGGGTACACAAG GCTGTAGGAAAAAAAAATCTATGTGCGTGTTAA

Coding sequence (CDS) from alignment at Sc0000086:66931..73963+

>Blg00321.0 ID=Blg00321.0|Name=Blg00321.0|organism=Branchiostoma lanceolatum|type=CDS|length=885bp|location=Sequence derived from alignment at Sc0000086:66931..73963+ (Branchiostoma lanceolatum)
ATGGAGGTCGGAAGGCTGATCAACTACTCCCCGGAGCGGTACCTGGCATG
TATGAGGGCCTTACGAGCTGCGTACGGTAATGACCAAATTAACAGAGACC
CCGCCTACTGCCAGTCCTTTGGAGCAAAACTTCCCGACTCTACCCTGTGT
GCGCCGGGAACCGACGTGCGTGTGTTGGGGATAGGGAGTGGATCAGGAGA
TGTTGACAGTGCCATTCTAAAGAAGCTTCTACAACGTCATAACAGTGTGT
TCAACAGGGTTGTGGAACCGTCGGAGGAAATGATCGAGTTATACAAGGCA
GGGGTAAGCGAAGACACGAGTCTCGGTGCTGTGAAGTTTGACTGGCGCCA
GCAGACAGCAGAAGAGTACTTCCAGACGAAAGATCCGAAGGACACCAAGT
TCCACCTGATCCATGCAATCCACGTTCTGTACCATGTGGAAGACCTTCAC
GCCACCTTGCGGGACATGTGGGAACAGCTTGCAGATGGTGGTTACATGTT
AATCGCCATTAAGTCAGGCAAGGATGCTGGTGCGAAGCTGTGGTACAAGT
TGTGGGAGGAGTTCGGCCGAGGCGACCGTCTGGAGACGTCACTTCGTACG
TCCGATGACGTCAAACACTGGCTTGACGCAAAGGGCATCAGCTACGTCAG
CTCAGAGGAAGATGGATTTGCATTCAATATTAACATTTCAGAGTGTTTTA
ATGAAGAATCAGAAGAAGGAAGGAAGATTCTCGACTTCTTAACACAAACG
CCTCACGTATCCAGTATGCCAGAAATAAGATCAATGGCTTTGGAGTACCT
GCGACGTAATTCAACCGGGGTTGACGGAAAGATTATTCACAAAAGAAAAT
TCGAAGTTATTCTCGCTTCCAAAAAAGGCGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00321.0Blg00321.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00321.0-exon-Sc0000086-1570713199:66931..67073Blg00321.0-exon-Sc0000086-1570713199:66931..67073Branchiostoma lanceolatumexon
Blg00321.0-exon-Sc0000086-1570713199:72001..72086Blg00321.0-exon-Sc0000086-1570713199:72001..72086Branchiostoma lanceolatumexon
Blg00321.0-exon-Sc0000086-1570713199:72134..72338Blg00321.0-exon-Sc0000086-1570713199:72134..72338Branchiostoma lanceolatumexon
Blg00321.0-exon-Sc0000086-1570713199:72660..72760Blg00321.0-exon-Sc0000086-1570713199:72660..72760Branchiostoma lanceolatumexon
Blg00321.0-exon-Sc0000086-1570713199:72902..73121Blg00321.0-exon-Sc0000086-1570713199:72902..73121Branchiostoma lanceolatumexon
Blg00321.0-exon-Sc0000086-1570713199:73351..73963Blg00321.0-exon-Sc0000086-1570713199:73351..73963Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:66931..73963 +
Properties
Property NameValue
GeneIDBlg00321